New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4028177	88 (0.860)	3 (0.030)	3/298	12.6	3.4%	coding (596/1164 nt)	fadA	3‑ketoacyl‑CoA thiolase (thiolase I)
	?	NC_000913	= 4028231	84 (0.840)					coding (542/1164 nt)	fadA	3‑ketoacyl‑CoA thiolase (thiolase I)
Rejected: Position hash score below cutoff.

TAAGACCTAATTCATGGGCGCGGCTTTCACTCATCACCAGCATGGCAGCTGCGCCATCGGAAAGTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGCCAGCATTTCTGCCGTTAAGCCCATCATGCCCGCCGCTTTGGCGACATTGCGGCTCAGGCC  >  NC_000913/4027989‑4028370                                                                                                                                                                                             |                                                                                                                                                                                                  tAAGACCTAATTCATGGGCGCGGCTTTCACTCATCACCAGCATGGCAGCTGCGCCATCGGAAAGTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCg                                                                                                                                                                                        <  4:476006/200‑1 (MQ=255)        tAATTCATGGGCGCGGCTTTCACTCATCACCAGCATGGCAGCTGCGCCATCGGAAAGTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGaccac                                                                                                                                                                                 <  4:748308/200‑1 (MQ=255)          aTTCATGGGCGCGGCTTTCACTCATCACCAGCATGGCAGCTGCGCCATCGGAAAGTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCg                                                                                                                                                                               >  4:391141/1‑200 (MQ=255)                                  tcaCCAGCATGGCAGCTGCGCCATCGGAAAGTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAAt                                                                                                                                                       >  4:740678/1‑200 (MQ=255)                                        gCATGGCAGCTGCGCCATCGGAAAGTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGc                                                                                                                                                                                                   >  3:824593/1‑150 (MQ=255)                                                  tGCGCCATCGGAAAGTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTgg                                                                                                                                       <  4:204355/200‑1 (MQ=255)                                                        aTCGGAAAGTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGccc                                                                                                                                 >  4:682604/1‑200 (MQ=255)                                                        aTCGGAAAGTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGccc                                                                                                                                 >  4:218307/1‑200 (MQ=255)                                                        aTCGGAAAGTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTACACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGccc                                                                                                                                 >  4:485452/1‑200 (MQ=255)                                                           ggAAAGTGCAGAAGTTGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGaccacc                                                                                                                                                                                <  3:76479/150‑1 (MQ=255)                                                                gTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGac                                                                                                                                                                                    >  1:343977/1‑141 (MQ=255)                                                                gTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCg                                                                                                                                                                           >  3:749772/1‑150 (MQ=255)                                                                gTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCg                                                                                                                                                                           >  3:198496/1‑150 (MQ=255)                                                                gTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCg                                                                                                                                                                           >  3:678527/1‑150 (MQ=255)                                                                gTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCg                                                                                                                                                                           >  3:492617/1‑150 (MQ=255)                                                                     gaagaTGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGCGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTACTTAAACTGCTTCAGGAAGCCGTCGGCATCg                                                                                                                                                                                        >  2:224743/1‑132 (MQ=255)                                                                       agaTGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGgatgat                                                                                                                                                                    >  3:654774/1‑150 (MQ=255)                                                                        gaggtgCCCGCCGTTACCAGACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTc                                                                                                                                                                            <  1:147299/138‑1 (MQ=255)                                                                        gaTGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGa                                                                                                                                                                                     >  2:601849/1‑132 (MQ=255)                                                                            ggCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGaccac                                                                                                                                                                                 <  2:622443/131‑1 (MQ=255)                                                                             gCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGaccacc                                                                                                                                                                                <  2:79767/132‑1 (MQ=255)                                                                             gCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCAtt                                                                                                                                                              <  3:133361/150‑1 (MQ=255)                                                                                cgccgTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCCCGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAACCTGCTTCAGGACGCCGTCGGCATCGTGACCACCgga                                                                                                                                                                             >  2:45421/1‑131 (MQ=255)                                                                                 gccgTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGAtt                                                                                                                                                                   >  1:257908/1‑141 (MQ=255)                                                                                    gTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGACTCACTTCGTCGTACTTAAACTCCTTCAGCACGCCGTCGGCATCGTGCCCCCCGCTCggg                                                                                                                                                                         >  2:694862/1‑132 (MQ=255)                                                                                     ttACCATACCGTTTACTGGATCAACCGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTGCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTAATTGTTAAATGCGGCCGACTGCGTGGCGGCCTAGGCGCGGGCTGGTGACCGCGCGGCAAAg                                                                                                    >  4:509788/1‑200 (MQ=255)                                                                                     ttACCATACCGTTTACTGGATCAAACGCTGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTAAt                                                                                                                                                               >  1:537622/1‑141 (MQ=255)                                                                                     ttACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCAt                                                                                                                                                               >  1:685731/1‑141 (MQ=255)                                                                                     ttACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAg                                                                                                    >  4:114787/1‑200 (MQ=255)                                                                                      tACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCCGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGc                                                                                                                                                     >  3:664428/1‑150 (MQ=255)                                                                                      tACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGgat                                                                                                                                                                       <  2:566354/132‑1 (MQ=255)                                                                                       aCCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGTTCGGGATGATTTCATTTTTAAATTCg                                                                                                                                                    >  3:694495/1‑150 (MQ=255)                                                                                       aCCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCAttt                                                                                                                                                             >  1:189751/1‑141 (MQ=255)                                                                                       aCCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCg                                                                                                                                                    >  3:825729/1‑150 (MQ=255)                                                                                       aCCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCg                                                                                                                                                    >  3:651900/1‑150 (MQ=255)                                                                                       aCCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCACAGGc                                                                                                  >  4:584350/1‑200 (MQ=255)                                                                                       aCCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGc                                                                                                  <  4:187425/200‑1 (MQ=255)                                                                                          atcccGTTTCCCGGATCAAGCGCAGGACGCATCGTGGCGAGGGCTTCCACGGTGGTGTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGAtt                                                                                                                                                                   <  2:43185/129‑1 (MQ=255)                                                                                            aCCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCACCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGa                                                                                                                                               >  3:814983/1‑150 (MQ=255)                                                                                                 ttACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCgg                                                                                                                                                   >  1:249333/1‑141 (MQ=255)                                                                                                      ggATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGAc                                                                                                                                              >  1:102713/1‑141 (MQ=255)                                                                                                      ggATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTggcg                                                                                                                                     >  3:370140/1‑150 (MQ=255)                                                                                                      ggATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACg                                                                                   >  4:672448/1‑200 (MQ=255)                                                                                                      ggATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACg                                                                                   >  4:253146/1‑200 (MQ=255)                                                                                                       gATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTCCACgg                                                                                  >  4:103579/1‑200 (MQ=255)                                                                                                        aTCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTg                                                                                                                                            <  1:486953/141‑1 (MQ=255)                                                                                                        aTCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTg                                                                                                                                            >  1:64807/1‑141 (MQ=255)                                                                                                        aTCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGc                                                                                 <  4:139182/200‑1 (MQ=255)                                                                                                              cGCCGGACGCAGCGTGGCGCGGGCTTCCACGGTGGTTTCCGTGCGAATCCCTTCGTCGTAATTAACCTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATAc                                                                           <  4:107446/200‑1 (MQ=255)                                                                                                              cGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATAc                                                                           <  4:749818/200‑1 (MQ=255)                                                                                                              cGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATAc                                                                           <  4:500233/200‑1 (MQ=255)                                                                                                              cGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATAc                                                                           <  4:233774/200‑1 (MQ=255)                                                                                                               gCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGgcg                                                                                                                            <  3:227112/150‑1 (MQ=255)                                                                                                                  ggACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGcc                                                                                                                                  >  1:375515/1‑141 (MQ=255)                                                                                                                        aGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGgcg                                                                                                                            <  1:437447/141‑1 (MQ=255)                                                                                                                         gCGTGGCTCGCGCTTCCACCGCGCTTTCCGGCCGAATCACCTCGTCGCATTTACACTGCGTCACGACGCCGTCGGCATCGTGACCATCCGTCTGTATCCTTTCCTTTTTACACGCGGccttctccgtcgctg                                                                                                                                    >  2:42147/1‑119 (MQ=255)                                                                                                                         gCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGTACGCCGGCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGtgtg                                                                                                                  <  3:216490/150‑1 (MQ=255)                                                                                                                         gCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGgcgc                                                                                                                           >  1:136760/1‑141 (MQ=255)                                                                                                                           gTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGcc                                                                                                                                  >  2:120158/1‑132 (MQ=255)                                                                                                                            tGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGcc                                                             >  4:506361/1‑200 (MQ=255)                                                                                                                            tGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGcc                                                             >  4:284158/1‑200 (MQ=255)                                                                                                                                 aGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGCCAGCAt                                                        <  4:239834/200‑1 (MQ=255)                                                                                                                                   ggCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATTCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTTGGACCGCGCGGCAAAAGCATCCTGCATTTTACGGCTGATACCGTGCATACGCGGCCGCAttt                                                      >  4:379636/1‑200 (MQ=255)                                                                                                                                    gCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGAc                                                                                                                <  1:335401/141‑1 (MQ=255)                                                                                                                                       tCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCg                                                                                                                      <  2:278955/132‑1 (MQ=255)                                                                                                                                        ccACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACcgcg                                                                                                            >  1:11747/1‑141 (MQ=255)                                                                                                                                        ccACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAgg                                                                                                   >  3:274466/1‑150 (MQ=255)                                                                                                                                             gtggtTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGAc                                                                                                                <  2:615228/132‑1 (MQ=255)                                                                                                                                                  ttCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGc                                                                                                  <  1:575677/141‑1 (MQ=255)                                                                                                                                                          gAATCACTTCTGCGTAATTAACCTGCTGCAGGACGCCGTGGGCATCGGGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGGGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGc                                                                                 <  3:230577/150‑1 (MQ=255)                                                                                                                                                           aaTCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGCCAGCATTTCTGCCGTTAAGCCCATCATGCccg                              >  4:7193/1‑200 (MQ=255)                                                                                                                                                                cTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATAc                                                                           <  3:474316/150‑1 (MQ=255)                                                                                                                                                                  tcgtcgTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCg                                                                         <  3:719661/150‑1 (MQ=255)                                                                                                                                                                      cgtAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGCCAGCATTTCTGCCGTTAAGCCCATCATGCCCGCCGCTTTGGCg                   <  4:185731/200‑1 (MQ=255)                                                                                                                                                                       gtAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTc                                                                                      >  2:534895/1‑132 (MQ=255)                                                                                                                                                                        tAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCa                                                                                     >  2:393921/1‑132 (MQ=255)                                                                                                                                                                        tAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCa                                                                                     >  2:391662/1‑132 (MQ=255)                                                                                                                                                                        tAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATa                                                                   >  3:757962/1‑150 (MQ=255)                                                                                                                                                                        tAATTAAACTGCTCCAGCACCCCGTCGGCATCGTGACCCCCGGTCGGGATGATTTCATTTTTAAATTCCGCCGACTGCGTGCCGTCTCAGGCGCGGCCGTGTGATCGCGCCGCTAACGCATCCTGCACTTCa                                                                                     >  2:515804/1‑132 (MQ=255)                                                                                                                                                                         aaTTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAGATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATAc                                                                           <  1:120161/141‑1 (MQ=255)                                                                                                                                                                         aaTTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTTACGGCTGATAc                                                                           >  1:519484/1‑141 (MQ=255)                                                                                                                                                                            tAAGCTGCTGCAGGACGCCGTCGGCAGCGTGACCGCCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGc                                                                                 <  2:450659/132‑1 (MQ=255)                                                                                                                                                                            tAAACTGCTGCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGc                                                                                 <  2:232863/132‑1 (MQ=255)                                                                                                                                                                               aCTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGCCAGCATTTCTGCCGTTAAGCCCATCATGCCCGCCGCTTTGGCGACATTGCgg          <  4:291397/200‑1 (MQ=255)                                                                                                                                                                                  gCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGCTACCGTGCATACGCGCCAGcc                                                         >  3:289204/1‑149 (MQ=255)                                                                                                                                                                                   cTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGCCAGCAt                                                        <  3:295157/150‑1 (MQ=255)                                                                                                                                                                                     tCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGCCAGCATTTCTGCCGTTAAGCCCATCATGCCCGCCGCTTTGGCGACATTGCGGCCCAgg    >  4:836214/1‑200 (MQ=255)                                                                                                                                                                                       aGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGCCAGCATTTCTGCCGTTAAGCCCATCATGCCCGCCGCTTTGGCGACATTGCGGCTCAGGcc  <  4:546390/200‑1 (MQ=255)                                                                                                                                                                                       aGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGCCAGCATTTCTGCCGTTAAGCCCATCATGCCCGCCGCTTTGGCGACATTGCGGCTCAGGcc  <  4:381334/200‑1 (MQ=255)                                                                                                                                                                                             |                                                                                                                                                                                                  TAAGACCTAATTCATGGGCGCGGCTTTCACTCATCACCAGCATGGCAGCTGCGCCATCGGAAAGTGCAGAAGATGTGCCCGCCGTTACCATACCGTTTACTGGATCAAACGCCGGACGCAGCGTGGCGAGGGCTTCCACGGTGGTTTCCGGGCGAATCACTTCGTCGTAATTAAACTGCTTCAGGACGCCGTCGGCATCGTGACCACCGGTCGGGATGATTTCATTTTTAAATGCGGCCGACTGCGTGGCGGCCCAGGCGCGGGCGTGTGACCGCGCGGCAAAGGCATCCTGCATTTCACGGCTGATACCGTGCATACGCGCCAGCATTTCTGCCGTTAAGCCCATCATGCCCGCCGCTTTGGCGACATTGCGGCTCAGGCC  >  NC_000913/4027989‑4028370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.