New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	724120 =	87 (0.850)	6 (0.060)	5/288	10.8	6.8%	coding (295/2685 nt)	kdpD	fused sensory histidine kinase in two‑component regulatory system with KdpE: signal sensing protein
	?	NC_000913	724157 =	82 (0.850)					coding (258/2685 nt)	kdpD	fused sensory histidine kinase in two‑component regulatory system with KdpE: signal sensing protein
Rejected: Position hash score below cutoff.

GACTTTCCAGATGCTGAACGTTGACGGTAGTGAAAACA‑TCAATGCCAGCTTCCAGCAGTTCTTCGATATCCTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCCTGCACAGGCACCGAAGAAAACTTTCAG  >  NC_000913/723967‑724342                                                                                                                                                                                                 |                                                                                                                                                                                          gtatttCCAGTGGTTGGACGTTGGTGGTAATGAAAACACTCAGTCCCGCCTTCAAG‑AGTTTCTCGATATTCTGCCAGCCTTTGGGGTTCCCGGGAACCAGG‑GCATTATTGGGGGCCCGGTTGTCCATTTAGAGCAGGGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGcc                                                                                                                                                                                  <  4:468281/197‑1 (MQ=255)             gCTGAACGTTGACGGTAGTGAAAACA‑TCAATGCCAGCTTCCAGCAGTTCTTCGATATCCTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAAc                                                                                                                                                                      <  4:218748/200‑1 (MQ=255)                    gTTGACGGTAGTGAAAACA‑TCAATGCCAGCTTCCAGCAGTTCTTCGATATCCTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGaa                                                                                                                                                               >  4:386175/1‑200 (MQ=255)                         cGGTAGTGAAAACA‑TCAATGCCAGCTTCCAGCAGTTCTTCGATATCCTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAAcagcc                                                                                                                                                          >  4:553178/1‑200 (MQ=255)                           gTAGTGAAAACA‑TCAATGCCAGCTTCCAGCAGTTCTTCGATATCCTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAAcagccag                                                                                                                                                        >  4:651054/1‑200 (MQ=255)                                               cAGCTTCCAGCAGTTCTTCGATATCCTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGt                                                                                                                                                                                       <  3:436516/150‑1 (MQ=255)                                                    tCCAGCAGGTCTTCGATATCCTGCCAGCGTTG‑GGGATTACGGGAAGCTGGCTCATTACGGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGcc                                                                                                                                                                                  <  3:113264/150‑1 (MQ=255)                                                        gcagTTCTTCGATATCCTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGt                                                                                                                                                                                       <  1:528482/141‑1 (MQ=255)                                                              cttcGATATCCTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTTCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCt                                                                                                                                                                                 >  1:248891/1‑141 (MQ=255)                                                              cttcGATATCCTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCt                                                                                                                                                                                 >  1:117280/1‑141 (MQ=255)                                                                  gATATCCTGCCAGCGCTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTACGATCAGCGCCGGGCGGCCGGCGAGGGCGTCATCGAGATCAAACACGCTGATCTGCCGCCCCCGGTCCGCCTGGCGTTTTAACgt                                                                                                                                                                    >  3:530074/1‑149 (MQ=255)                                                                      tCCTGCCAGCGTTT‑GGGATGTCGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGTGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGcc                                                                                                                                                                                  <  2:445319/132‑1 (MQ=255)                                                                        cTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGccgg                                                                                                                                                                                >  2:342154/1‑130 (MQ=255)                                                                        cTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAAc                                                                                                                                                              <  3:660810/150‑1 (MQ=255)                                                                         tGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTAc                                                                                                           <  4:390506/200‑1 (MQ=255)                                                                              gCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGc                                                                                                      >  4:398007/1‑200 (MQ=255)                                                                              gCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCACCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGc                                                                                                      >  4:5597/1‑200 (MQ=255)                                                                                           aCGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAAc                                                                                                                                                              <  2:379409/132‑1 (MQ=255)                                                                                           aCGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAatat                                                                                          <  4:728525/200‑1 (MQ=255)                                                                                            cGGGAACCGGGGGAATTCCTGGGGGCAGGTTGGTCAATTAAGACAGGCGCGGGGGGGCGGGCGAGGGCGGAATCGGGATCAACTTGGTTGTAAGGCCG‑CCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATcc                                                                                        <  4:149519/200‑1 (MQ=255)                                                                                                 aCCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGcc                                                                                    <  4:677275/200‑1 (MQ=255)                                                                                                 aCCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGcc                                                                                    <  4:26991/200‑1 (MQ=255)                                                                                                  ccTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGc                                                                                                                                              >  1:218895/1‑141 (MQ=255)                                                                                                  ccTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGgcggcg                                                                                                                                     >  3:661919/1‑150 (MQ=255)                                                                                                  ccTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGccc                                                                                   <  4:815839/200‑1 (MQ=255)                                                                                                   cTGGCGAATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACagccagcc                                                                                                                                                      <  2:253010/132‑1 (MQ=255)                                                                                                    tGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGccc                                                                                                                                                     <  2:671664/132‑1 (MQ=255)                                                                                                      gcgcATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCtt                                                                                                                                                   >  2:241557/1‑132 (MQ=255)                                                                                                       cgcATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATggc                                                                                                                                         >  1:538408/1‑141 (MQ=255)                                                                                                        gcATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCCCGCCAACCACAATATCCAGCCCTTgcgc                                                                             >  4:271832/1‑200 (MQ=255)                                                                                                           ttACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCtttt                                                                                                                            <  3:588609/150‑1 (MQ=255)                                                                                                           ttACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCtttt                                                                                                                            >  3:311175/1‑150 (MQ=255)                                                                                                             gtaatgCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCa                                                                        >  4:548406/5‑200 (MQ=255)                                                                                                             aCTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGt                                                                                                                                   >  1:411195/1‑141 (MQ=255)                                                                                                             aCTGGGCGGCAGTTCGGCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCAt                                                                                                                                            <  2:217139/132‑1 (MQ=255)                                                                                                              cTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCGGCCCACGGTACGCCTGGCGTTTTAACGGCAGCACAGCCCGCCCTTCCAGCATGGcggcggca                                                                                                                                  >  1:473767/1‑139 (MQ=255)                                                                                                              cTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTa                                                                                                                                  >  1:183399/1‑141 (MQ=255)                                                                                                              cTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTa                                                                                                                                  >  1:35202/1‑141 (MQ=255)                                                                                                              cTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGc                                                                                                                         >  3:627878/1‑150 (MQ=255)                                                                                                                  gcgcCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGc                                                                   >  4:161711/1‑200 (MQ=255)                                                                                                                    gcCAGTGCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCtttt                                                                                                                            <  1:618847/141‑1 (MQ=255)                                                                                                                       aGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGtt                                                                                                                >  3:27581/1‑150 (MQ=255)                                                                                                                        gTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCCAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGcc                                                                                                                        <  1:574005/141‑1 (MQ=255)                                                                                                                        gTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGcc                                                                                                                        <  1:165742/141‑1 (MQ=255)                                                                                                                              ccATTAGGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTggg                                                                                                                  <  1:383710/141‑1 (MQ=255)                                                                                                                              ccATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCTGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGcc                                                       >  4:248086/1‑200 (MQ=255)                                                                                                                              ccATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTggg                                                                                                                  >  1:163554/1‑141 (MQ=255)                                                                                                                               cATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGt                                                                                                                 >  1:204987/1‑141 (MQ=255)                                                                                                                                aTTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGtt                                                                                                                >  1:501459/1‑141 (MQ=255)                                                                                                                                aTTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGTGCTTCTGCCAg                                                     >  4:379708/1‑200 (MQ=255)                                                                                                                                aTTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAg                                                     >  4:344513/1‑200 (MQ=255)                                                                                                                                     gATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTg                                                                                                                    >  2:615585/1‑132 (MQ=255)                                                                                                                                     gATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTAc                                                                                                           <  1:675410/141‑1 (MQ=255)                                                                                                                                     gATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCGACCACAATATCCACCCCTTGCGTCCGCAGGCGCTGGGCTTCTGCCAGCATcc                                                >  4:847603/1‑199 (MQ=255)                                                                                                                                     gATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCg                                                >  4:222087/1‑200 (MQ=255)                                                                                                                                     gATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAACCCTTCCAGCATGCCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAAc                                                                                                  >  3:788222/1‑150 (MQ=255)                                                                                                                                             cgccaggcgtaccgtgggCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTc                                        <  4:390074/185‑1 (MQ=255)                                                                                                                                             ccGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAatat                                                                                          <  3:482710/150‑1 (MQ=255)                                                                                                                                             ccGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTc                                        <  4:198375/200‑1 (MQ=255)                                                                                                                                             ccGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTc                                        <  4:231702/200‑1 (MQ=255)                                                                                                                                              cGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTAc                                                                                                           <  2:569730/132‑1 (MQ=255)                                                                                                                                               gggCGGCGGGCGAGGGCGACATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATcc                                                                                        <  3:247914/150‑1 (MQ=255)                                                                                                                                                 gcggcgGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTcc                                    <  4:86371/200‑1 (MQ=255)                                                                                                                                                      gggcgAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAatat                                                                                          <  1:375328/141‑1 (MQ=255)                                                                                                                                                       ggcgAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAAc                                                                                                  >  2:530384/1‑132 (MQ=255)                                                                                                                                                            gggCGGTCTCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCTTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGcc                                                                                    <  1:96439/141‑1 (MQ=255)                                                                                                                                                             ggcggcATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGccc                                                                                   <  1:533552/141‑1 (MQ=255)                                                                                                                                                              gcggcATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCt                                                                                  <  1:646386/141‑1 (MQ=255)                                                                                                                                                               cggcATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCTAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAatat                                                                                          <  2:213730/132‑1 (MQ=255)                                                                                                                                                                 gcATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCACGTCGCCGTAATTGATTCGCCGCAGGGTCTCTACCACGCCACCCACAATACcc                                                                                        >  2:466691/1‑132 (MQ=255)                                                                                                                                                                  cATCGAGATCAAACTCGCTGATATGCAGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTgcg                                                                              <  1:549239/141‑1 (MQ=255)                                                                                                                                                                       aggtCAAACTAGCTGATATGCCGCCCACGGTACGGCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGc                                                                         <  1:236369/138‑1 (MQ=255)                                                                                                                                                                       agaTCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGc                                                                         >  1:27703/1‑141 (MQ=255)                                                                                                                                                                       agaTCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGc                                                                         <  1:572423/141‑1 (MQ=255)                                                                                                                                                                        gaTCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGTCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCCTGCACAGGCACCgaag             >  4:523257/1‑200 (MQ=255)                                                                                                                                                                                 cGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTggg                                                               <  1:233867/141‑1 (MQ=255)                                                                                                                                                                                 cGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTggg                                                               <  1:75350/141‑1 (MQ=255)                                                                                                                                                                                   cTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGc                                                    >  3:215890/1‑150 (MQ=255)                                                                                                                                                                                   cTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGCCGGTATCTTTTCGCCCGTGGGTTTCCACCACCCCAACCCCAATCTCCAGCCCTTGCGCCCGCCGt                                                                      >  2:675134/1‑132 (MQ=255)                                                                                                                                                                                   cTGATATGCCGCCCACGGTACGCCAGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCCTGCACAGGCACCGAAGAAAACTTTCAg  >  4:783012/1‑200 (MQ=255)                                                                                                                                                                                     gATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTc                                                           >  1:396438/1‑141 (MQ=255)                                                                                                                                                                                     gATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCCTCCAGCATGGCGGCGGTATCTCTTCGCCCGCGGGTTTCTACCACGCCAACCACAATATCACGCCCTTGCGCCCGCAGTCg                                                                    >  2:72484/1‑132 (MQ=255)                                                                                                                                                                                       tatGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTg                                                         <  1:254315/141‑1 (MQ=255)                                                                                                                                                                                            cgccCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGc                                                    <  1:452552/141‑1 (MQ=255)                                                                                                                                                                                                 |                                                                                                                                                                                          GACTTTCCAGATGCTGAACGTTGACGGTAGTGAAAACA‑TCAATGCCAGCTTCCAGCAGTTCTTCGATATCCTGCCAGCGTTT‑GGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCCTGCACAGGCACCGAAGAAAACTTTCAG  >  NC_000913/723967‑724342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.