BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3327193 =	105 (1.020)	5 (0.050)	4/288	11.5	4.7%	coding (472/630 nt)	rlmE	23S rRNA U2552 2'‑O‑ribose methyltransferase, SAM‑dependent
*	?	NC_000913	3327230 =	104 (1.080)	5 (0.050)	4/288	11.5	4.7%	coding (435/630 nt)	rlmE	23S rRNA U2552 2'‑O‑ribose methyltransferase, SAM‑dependent
Rejected: Position hash score below cutoff.

Only 100 of 105 total aligned reads displayed.

GGTTAGGGTTTACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGAT  >  NC_000913/3327033‑3327417

ggTTAGGGTTTACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTc                                                                                                                                                                                           <  4:277066/200‑1 (MQ=255)

ggTTAGGGTTTACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTc                                                                                                                                                                                           >  4:349618/1‑200 (MQ=255)

     gggTTTACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTccacca                                                                                                                                                                                      >  4:436288/1‑200 (MQ=255)

      ggTTTACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTccacc                                                                                                                                                                                       <  4:511432/198‑1 (MQ=255)

                  gTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACg                                                                                                                                                                         >  4:254132/1‑200 (MQ=255)

                    cGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACTTCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACggg                                                                                                                                                                       >  4:195074/1‑200 (MQ=255)

                      cTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACggggg                                                                                                                                                                     <  4:379994/200‑1 (MQ=255)

                      cTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACggggg                                                                                                                                                                     >  4:185019/1‑200 (MQ=255)

                        aCAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACCTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGat                                                                                                                                                                   >  4:110174/1‑200 (MQ=255)

                          aaTATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGatat                                                                                                                                                                 >  4:453958/1‑200 (MQ=255)

                                 acTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCAccgc                                                                                                                                                          <  4:583317/200‑1 (MQ=255)

                                                   cGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATTCTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGtt                                                                                                                                        >  4:102083/1‑200 (MQ=255)

                                                   cGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCAAGTTcc                                                                                                                                                                                          >  3:612569/1‑150 (MQ=255)

                                                        agagTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTg                                                                                                                                   <  4:479732/200‑1 (MQ=255)

                                                         gagTCCGGCTTACGAACTTTAACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGc                                                                                                                                  <  4:793900/200‑1 (MQ=255)

                                                           gTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTc                                                                                                                                                                                           <  1:260840/141‑1 (MQ=255)

                                                           gTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTc                                                                                                                                                                                           <  1:50739/141‑1 (MQ=255)

                                                                gCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTccacca                                                                                                                                                                                      <  1:560188/141‑1 (MQ=255)

                                                                gCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTcaacca                                                                                                                                                                                      >  1:570972/1‑141 (MQ=255)

                                                                   tACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGAc                                                                                                                        <  4:612613/200‑1 (MQ=255)

                                                                     cGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATAc                                                                                                                                                                                 <  1:181114/141‑1 (MQ=255)

                                                                       aaCTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACgggg                                                                                                                                                                      >  3:783721/1‑150 (MQ=255)

                                                                        aCTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGAc                                                                                                                   <  4:841355/200‑1 (MQ=255)

                                                                         cTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATgg                                                                                                                                                                             >  1:188789/1‑141 (MQ=255)

                                                                          tttGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGc                                                                                                                                                                            <  1:4449/141‑1 (MQ=255)

                                                                             gACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATa                                                                                                                                                                                  <  2:323949/132‑1 (MQ=255)

                                                                             gACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATa                                                                                                                                                                                  <  2:97850/132‑1 (MQ=255)

                                                                             gACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCt                                                                                                              <  4:669597/200‑1 (MQ=255)

                                                                              aCCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATcc                                                                                                                                                               <  3:195097/150‑1 (MQ=255)

                                                                              aCCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATcc                                                                                                                                                               <  3:185014/150‑1 (MQ=255)

                                                                                 ttCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATg                                                                                                                                                                              >  2:644747/1‑132 (MQ=255)

                                                                                 ttCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACATGGAc                                                                                                          >  4:496335/1‑200 (MQ=255)

                                                                                 ttCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACAAATTTCTAGCGCCAGTTCCACCAGATACATTGCACGCGGGATATCCAcc                                                                                                                                                            >  3:499039/1‑150 (MQ=255)

                                                                                  tCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTTACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACt                                                                                                         >  4:526979/1‑200 (MQ=255)

                                                                                  tCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATgg                                                                                                                                                                             <  2:188784/132‑1 (MQ=255)

                                                                                  tCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGa                                                                                                                                                                    >  1:248257/1‑141 (MQ=255)

                                                                                  tCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCAccg                                                                                                                                                           >  3:779166/1‑150 (MQ=255)

                                                                                  tCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCAccg                                                                                                                                                           >  3:452774/1‑150 (MQ=255)

                                                                                   cGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCAccgc                                                                                                                                                          >  3:175923/1‑150 (MQ=255)

                                                                                    gTAAACAGGGAGCGAATATCCCTTAGATACTCATCGAAACCTTCTCCCTGGAACAACTTAACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTATCGCCAGTTCCACTAGATACACGGCAAGGGGGGTATCCAcctcc                                                                                                                                                         >  3:838492/1‑150 (MQ=255)

                                                                                         caaggAGCGAATTGCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTACCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCAc                                                                                                                                                             <  1:89842/138‑1 (MQ=255)

                                                                                         cAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGgtgt                                                                                                                                                    >  3:67389/1‑150 (MQ=255)

                                                                                         cAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTACACTACAAGACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTACCACCAGATACATGGCACGGGGGATATCCAc                                                                                                                                                             <  1:644042/141‑1 (MQ=255)

                                                                                             gAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCg                                                                                                                                                >  3:192585/1‑150 (MQ=255)

                                                                                                       cccTTAGATACTCATCGAAACCTTCGCCCTGGAACACTTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCCGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTcc                                                                                    >  4:459874/1‑200 (MQ=255)

                                                                                                       cccTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTg                                                                                                                                      >  3:712949/1‑150 (MQ=255)

                                                                                                         cTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGgt                                                                                                                                                      >  2:137055/1‑132 (MQ=255)

                                                                                                         cTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGgt                                                                                                                                                      >  2:341233/1‑132 (MQ=255)

                                                                                                         cTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTc                                                                                                                                                  <  1:341243/136‑1 (MQ=255)

                                                                                                             gATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCACTTCCACCAGATACATGGACCGGGGGATATCCACCGCTGGTGTTCCGCTCCTgc                                                                                                                                         >  1:405237/1‑140 (MQ=255)

                                                                                                                 cTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTgg                                                                                                                                     <  1:602283/141‑1 (MQ=255)

                                                                                                                 cTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCtt                                                                          <  4:636554/200‑1 (MQ=255)

                                                                                                                  tCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTc                                                                                                                                             <  2:708257/132‑1 (MQ=255)

                                                                                                                   cATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTg                                                                                                                                   >  1:231497/1‑141 (MQ=255)

                                                                                                                   cATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTtc                                                                        >  4:104990/1‑200 (MQ=255)

                                                                                                                    aTCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGc                                                                                                                                  <  1:265768/141‑1 (MQ=255)

                                                                                                                     tCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGcc                                                                                                                                 <  1:298567/141‑1 (MQ=255)

                                                                                                                           ccTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACa                                                                                                                  >  3:46139/1‑150 (MQ=255)

                                                                                                                            cTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTg                                                                                                                                   <  2:173071/132‑1 (MQ=255)

                                                                                                                              tCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTtc                                                             <  4:783769/200‑1 (MQ=255)

                                                                                                                                   cTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACTTCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGAc                                                                                                          <  3:195069/150‑1 (MQ=255)

                                                                                                                                   cTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGAc                                                                                                                   <  1:459243/141‑1 (MQ=255)

                                                                                                                                   cTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGAc                                                                                                          >  3:25719/1‑150 (MQ=255)

                                                                                                                                   cTGGAAAACCTTCACTACGAAACTGCCACCTGGCGCGACTACATCACGACACATTTCTAGCGCCAGTTCCACCATATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGAc                                                                                                          <  3:637091/150‑1 (MQ=255)

                                                                                                                                     ggAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGa                                                      >  4:104345/1‑200 (MQ=255)

                                                                                                                                      gAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACttt                                                                                                       >  3:620448/1‑150 (MQ=255)

                                                                                                                                      gAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTtcat                                                           >  4:63897/1‑194 (MQ=255)

                                                                                                                                         cacCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTg                                                                                                             >  1:477920/1‑141 (MQ=255)

                                                                                                                                           ccTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGt                                                                                                  >  3:113540/1‑150 (MQ=255)

                                                                                                                                            cTTCACTACAAACCTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGAc                                                                                                                   <  2:390837/132‑1 (MQ=255)

                                                                                                                                            cTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGAc                                                                                                                   <  2:482344/132‑1 (MQ=255)

                                                                                                                                              tCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACaa                                                                                                                 >  2:699534/1‑132 (MQ=255)

                                                                                                                                                 cgaCAAAACTGACACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCAGTGTTCAGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGc                                                                                                     <  1:543450/139‑1 (MQ=255)

                                                                                                                                                 cTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCt                                                                                                              <  2:447781/132‑1 (MQ=255)

                                                                                                                                                 cTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGc                                                                                                     >  1:367663/1‑141 (MQ=255)

                                                                                                                                                        aCTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACttt                                                                                                       >  2:564059/1‑132 (MQ=255)

                                                                                                                                                        aCTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGcc                                                                                              <  1:129588/141‑1 (MQ=255)

                                                                                                                                                                   gcgcTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACCCCAACg                        >  4:46238/1‑200 (MQ=255)

                                                                                                                                                                    cgcTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGa                       <  4:175927/200‑1 (MQ=255)

                                                                                                                                                                      cTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATa                     >  4:238912/1‑200 (MQ=255)

                                                                                                                                                                      cTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATa                     >  4:834113/1‑200 (MQ=255)

                                                                                                                                                                        aaTACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAgg                   >  4:121257/1‑200 (MQ=255)

                                                                                                                                                                         aTACATCCCGACACAGTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTTCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCGTtcctca                                                                    >  3:740426/1‑150 (MQ=255)

                                                                                                                                                                         aTACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACG‑AAATCGCCCTGAAGAAAGTCCACACCAACGATAGGAt                 <  4:360431/200‑1 (MQ=255)

                                                                                                                                                                          tACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATTACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGAt                 <  4:270071/200‑1 (MQ=255)

                                                                                                                                                                           aCATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATc                <  4:46139/200‑1 (MQ=255)

                                                                                                                                                                            cATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCa                                                                 >  3:526473/1‑150 (MQ=255)

                                                                                                                                                                            cATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCa                                                                 >  3:557453/1‑150 (MQ=255)

                                                                                                                                                                              tCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCAt             <  4:240400/200‑1 (MQ=255)

                                                                                                                                                                              tCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCAt             <  4:851669/200‑1 (MQ=255)

                                                                                                                                                                                aCGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTtc                                                             <  3:303396/150‑1 (MQ=255)

                                                                                                                                                                                 cGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTtcatc                                                                     >  1:193576/1‑141 (MQ=255)

                                                                                                                                                                                 cGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAgg          <  4:192590/200‑1 (MQ=255)

                                                                                                                                                                                  gACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTtcat                                                           <  3:63895/150‑1 (MQ=255)

                                                                                                                                                                                   acacATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTTTCGCCACCGCGCTCCCGCAGTGCTTtcatccc                                                                   >  1:170472/1‑139 (MQ=255)

                                                                                                                                                                                   acacATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCAc                                                                   >  1:626588/1‑141 (MQ=255)

                                                                                                                                                                                      caTTTCTAGCGCCAGTTCCACCAGATACATGTCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCTATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCttt                                                                         >  2:646108/1‑132 (MQ=255)

                                                                                                                                                                                      caTTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAg                                                                >  1:152687/1‑141 (MQ=255)

                                                                                                                                                                                         ttCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGAt  <  4:620492/200‑1 (MQ=255)

                                                                                                                                                                                                     ttCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTgaag                                        <  3:233477/150‑1 (MQ=255)

GGTTAGGGTTTACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGAT  >  NC_000913/3327033‑3327417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.