BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4289024	125 (1.220)	3 (0.030)	3/288	12.3	2.3%	coding (1261/1437 nt)	nrfA	nitrite reductase, formate‑dependent, cytochrome
*	?	NC_000913	= 4289082	139 (1.440)	3 (0.030)	3/288	12.3	2.3%	coding (1319/1437 nt)	nrfA	nitrite reductase, formate‑dependent, cytochrome
Rejected: Position hash score below cutoff.

Only 100 of 151 total aligned reads displayed.

ATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTG  >  NC_000913/4288883‑4289280

atCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGTGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGc                                                                                                                                                                                                        <  4:37967/200‑1 (MQ=255)

atCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGc                                                                                                                                                                                                        <  4:134142/200‑1 (MQ=255)

               tGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTgg                                                                                                                                                                                         <  4:296114/200‑1 (MQ=255)

                 gcgcTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                                                                                                       >  4:364961/1‑200 (MQ=255)

                      gggATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGGTCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAAc                                                                                                                                                                                  <  4:173166/200‑1 (MQ=255)

                      gggATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAAc                                                                                                                                                                                  >  4:247265/1‑200 (MQ=255)

                       ggATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGcgcgccagtttggtg                                                                                                                                                                                 <  4:809556/200‑15 (MQ=255)

                                  tCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATc                                                                                                                                                                      <  4:350211/200‑1 (MQ=255)

                                                   cATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCACAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGcc                                                                                                                                                                                                       >  3:565744/1‑150 (MQ=255)

                                                   cATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGcc                                                                                                                                                                                                       <  3:134030/150‑1 (MQ=255)

                                                   cATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGcc                                                                                                                                                                                                       <  3:235537/150‑1 (MQ=255)

                                                   cATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGa                                                                                                                                                     >  4:162406/1‑200 (MQ=255)

                                                   cATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGa                                                                                                                                                     >  4:277738/1‑200 (MQ=255)

                                                      atGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGccccg                                                                                                                                                                                                    >  3:117347/1‑148 (MQ=255)

                                                         cacgcacCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCcagcag                                                                                                                                                                                                 <  3:498751/150‑1 (MQ=255)

                                                                 ggAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTgg                                                                                                                                                                                         >  3:216456/1‑150 (MQ=255)

                                                                  gaagaaGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGc                                                                                                                                                                                        >  3:555880/1‑150 (MQ=255)

                                                                   aagaagGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                                                                                                       <  3:189573/150‑1 (MQ=255)

                                                                        ggTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCAtt                                                                                                                                                                                           >  1:122709/1‑141 (MQ=255)

                                                                        ggTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAAc                                                                                                                                                                                  <  3:44303/150‑1 (MQ=255)

                                                                        ggTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATccc                                                                                                                                >  4:630405/1‑200 (MQ=255)

                                                                        ggTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCCCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCACAGCAGGCCATTGGCCTGAAc                                                                                                                                                                                  >  3:706251/1‑150 (MQ=255)

                                                                         gTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTg                                                                                                                                                                                          >  1:413245/1‑141 (MQ=255)

                                                                           ttACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCcagcag                                                                                                                                                                                                 <  2:126757/132‑1 (MQ=255)

                                                                           ttACGGATGCTCGGTACGACGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCcagcag                                                                                                                                                                                                 <  2:166512/132‑1 (MQ=255)

                                                                            tACGGATTCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGcc                                                                                                                                                                                       <  1:129197/141‑1 (MQ=255)

                                                                              cGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAC‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGaa                                                                                                                                                                            >  3:305435/1‑150 (MQ=255)

                                                                                    cTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATc                                                                                                                                                                      <  3:577285/150‑1 (MQ=255)

                                                                                     tCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGgaagaa                                                                                                                   >  4:598432/1‑200 (MQ=255)

                                                                                      cGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCTGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                  <  4:162380/200‑1 (MQ=255)

                                                                                        gTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                  >  4:578969/1‑200 (MQ=255)

                                                                                        gTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAAc                                                                                                                                                                           >  1:260623/1‑141 (MQ=255)

                                                                                        gTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAgg                                                                                                                                                                  >  3:471535/1‑150 (MQ=255)

                                                                                        gTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGAACCCGCAGTGGGAAGAACAg                                                                                                                >  4:330492/1‑200 (MQ=255)

                                                                                          aCGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAAc                                                                                                                                                                                  <  2:567788/132‑1 (MQ=255)

                                                                                          aCGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAAc                                                                                                                                                                                  <  2:700926/132‑1 (MQ=255)

                                                                                                  ggATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAGAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGc                                                                                                                                                                 >  1:205045/1‑141 (MQ=255)

                                                                                                  ggATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACa                                                                                                                                                                          >  2:539895/1‑132 (MQ=255)

                                                                                                  ggATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGc                                                                                                                                                                 <  1:301207/141‑1 (MQ=255)

                                                                                                  ggATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAAAATGGAAACAATCAAGGc                                                                                                                                                                 >  1:166612/1‑141 (MQ=255)

                                                                                                  ggATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATAAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGc                                                                                                                                                                 >  1:265976/1‑141 (MQ=255)

                                                                                                   gATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAg                                                                                                                                                       >  3:738731/1‑150 (MQ=255)

                                                                                                    aTAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAc                                                                                                    <  4:730653/200‑1 (MQ=255)

                                                                                                      aaaGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGAc                                                                                                                                                    <  3:377750/150‑1 (MQ=255)

                                                                                                         gcggcgGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAg                                                                                                                                                          <  1:467249/141‑1 (MQ=255)

                                                                                                           ggcggATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGc                                                                                                                                                                 <  2:33217/132‑1 (MQ=255)

                                                                                                               gATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGAc                                                                                                                                                    <  1:548142/141‑1 (MQ=255)

                                                                                                                     cgcacCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTtcatc                                                                                                                                              <  1:367494/141‑1 (MQ=255)

                                                                                                                       cacCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGAt                                                                                                                                   <  3:721963/150‑1 (MQ=255)

                                                                                                                       cacCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGAt                                                                                                                                   >  3:64666/1‑150 (MQ=255)

                                                                                                                       cacCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAAc                                                                                 >  4:217282/1‑200 (MQ=255)

                                                                                                                         ccAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACt                                                                                                                                                   >  2:447931/1‑132 (MQ=255)

                                                                                                                            aaCTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACgg                                                                                                                                       <  1:626705/141‑1 (MQ=255)

                                                                                                                                   gcgaCTGCTGGCGGCCAAAGGCACCACCCATGAAAGCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAAGATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAAc                                                                                                                                         <  2:155911/132‑1 (MQ=255)

                                                                                                                                       ctgctgGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAg                                                                                                                            <  1:483034/141‑1 (MQ=255)

                                                                                                                                         gctgGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTg                                                                                                                          >  1:270664/1‑141 (MQ=255)

                                                                                                                                                aCCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAATACGGTGATCCCGCAg                                                                                                                            >  2:575385/1‑132 (MQ=255)

                                                                                                                                                 ccAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTTGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGCCTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                  >  1:640662/1‑141 (MQ=255)

                                                                                                                                                 ccAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                  <  1:471681/141‑1 (MQ=255)

                                                                                                                                                  cAAAGGCATCACCCATAAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGaaa                                                      <  4:422108/200‑1 (MQ=255)

                                                                                                                                                     aGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGga                                                                                                                       <  2:111017/132‑1 (MQ=255)

                                                                                                                                                      ggCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAc                                                                                                    >  3:20324/1‑150 (MQ=255)

                                                                                                                                                      ggCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAc                                                                                                    <  3:859414/150‑1 (MQ=255)

                                                                                                                                                      ggCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAacac                                                  >  4:422404/1‑200 (MQ=255)

                                                                                                                                                      ggCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAacac                                                  <  4:769552/200‑1 (MQ=255)

                                                                                                                                                      ggCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAacac                                                  >  4:209767/1‑200 (MQ=255)

                                                                                                                                                       gCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAAccc                                                                               >  4:449183/1‑170 (MQ=255)

                                                                                                                                                          tgaCCCATGAAATCCGGATCCAGAATATCTCAACCGA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAGCGGTGATCCCGCAGTGGGAAGAAc                                                                                                                  <  2:150011/130‑1 (MQ=255)

                                                                                                                                                          tCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAAc                                                                                                                  <  2:695284/132‑1 (MQ=255)

                                                                                                                                                           cACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATgg                                             <  4:117349/200‑1 (MQ=255)

                                                                                                                                                             cccATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGTCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCCGTGGGAAGAACAGGCACGTAAAAACGGTCTGt                                                                                             >  3:281445/1‑150 (MQ=255)

                                                                                                                                                             cccATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAg                                           >  4:725410/1‑200 (MQ=255)

                                                                                                                                                             cccATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAg                                           >  4:39240/1‑200 (MQ=255)

                                                                                                                                                             cccATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGCGATCCCGCAGTGGGAAGAACAGGCACGCaata                                                                                                      >  1:165506/1‑139 (MQ=255)

                                                                                                                                                               cATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAc                                                                                                    <  1:514977/141‑1 (MQ=255)

                                                                                                                                                                   aaaTCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAata                                     <  4:477892/200‑1 (MQ=255)

                                                                                                                                                                     aTCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGTAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATg                                   <  4:358178/200‑1 (MQ=255)

                                                                                                                                                                      tCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGt                                                                                             >  1:334471/1‑141 (MQ=255)

                                                                                                                                                                      tCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAAt                                                                                    >  3:801093/1‑150 (MQ=255)

                                                                                                                                                                      tCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAAt                                                                                    >  3:654266/1‑150 (MQ=255)

                                                                                                                                                                       ccAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAg                                 <  4:470372/200‑1 (MQ=255)

                                                                                                                                                                       ccAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAg                                 <  4:440786/200‑1 (MQ=255)

                                                                                                                                                                         aGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCg                               <  4:155043/200‑1 (MQ=255)

                                                                                                                                                                           aTCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAAccc                                                                               <  3:364938/150‑1 (MQ=255)

                                                                                                                                                                               cGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAc                         <  4:555922/200‑1 (MQ=255)

                                                                                                                                                                                 gATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgt                       <  4:176833/200‑1 (MQ=255)

                                                                                                                                                                                   tatCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCACGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgttc                     >  4:241877/1‑200 (MQ=255)

                                                                                                                                                                                    atCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGc                                                                                        >  2:530391/1‑132 (MQ=255)

                                                                                                                                                                                        cAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCCGTGGGAAGAACAGGCACGTTAAAACGGTCTGTTAAGCCAATGACCCCGtt                                                                           >  1:317497/1‑141 (MQ=255)

                                                                                                                                                                                          aCCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATc                                                                                                                                                                      >  4:563707/1‑48 (MQ=255)

                                                                                                                                                                                          aCCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCGAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTa                                                                                           <  2:470114/123‑1 (MQ=255)

                                                                                                                                                                                          aCCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCaa                                                                >  3:431686/1‑150 (MQ=255)

                                                                                                                                                                                          aCCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGttatta              >  4:712073/1‑200 (MQ=255)

                                                                                                                                                                                           ccAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAAc                                                                                 <  2:19516/132‑1 (MQ=255)

                                                                                                                                                                                             aa‑‑aGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAAccc                                                                               <  2:307078/132‑1 (MQ=255)

                                                                                                                                                                                                  gagaAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATCTGAGCGTATTACGTTCGTTATTAACTGcc        >  4:638773/1‑200 (MQ=255)

                                                                                                                                                                                                     aaaGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGaa                                                       <  3:792691/150‑1 (MQ=255)

                                                                                                                                                                                                      aaGCCCAGCAGGGCATTGGCCTGAACATGGAACAAAGCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGaaa                                                      <  3:847141/150‑1 (MQ=255)

                                                                                                                                                                                                        gCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTg  >  4:717174/1‑200 (MQ=255)

                                                                                                                                                                                                        gCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTg  >  4:795015/1‑200 (MQ=255)

ATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAA‑‑AGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTG  >  NC_000913/4288883‑4289280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.