Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_000913 | 3,470,516 | 0 | C→T | 100.0% | ‑0.2 | 1 | G272S (GGT→AGT) | tufA | translation elongation factor EF‑Tu 1 |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (1/0): ref base (0/0): total (1/0) |
GTGCCCGGCTTAGCCAGTACCTGACCACGTTCGATTTCTTCACGTTTGATACCACGCAGCAGAACACCTACGTTCTCACCAGCACGGCCTTCGTCCAGCAGTTTGCGGAACATTTCAACGCCAGTACAGGTAGACTTCTGA > NC_000913/3470437‑3470577 | gTGCCCGGCTTAGCCAGTACCTGACCACGTTCGATTTCTTCACGTTTGATACCACGCAGCAGAACACCTACGTTCTCACTAGCACGGCCTTCGTCCAGCAGTTTGCGGTACATTCCAACGCCAGCAcctttcccttataaa > 1:60258/1‑127 (MQ=1) | GTGCCCGGCTTAGCCAGTACCTGACCACGTTCGATTTCTTCACGTTTGATACCACGCAGCAGAACACCTACGTTCTCACCAGCACGGCCTTCGTCCAGCAGTTTGCGGAACATTTCAACGCCAGTACAGGTAGACTTCTGA > NC_000913/3470437‑3470577 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |