Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4476781	4477156	376	31 [29]	[28] 39	yjgL	SopA‑central‑domain‑like hexapeptide repeat protein

ACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATAC  >  NC_000913/4477080‑4477353                                                                              |                                                                                                                                                                                                     aCTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAac                                                                                                                                           >  1:112809/1‑137 (MQ=255)      ataatGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAac                                                                                                                                           <  3:112799/132‑1 (MQ=255)        aatGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCgg                                                                     >  2:673555/1‑200 (MQ=255)                  aaCTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAAc                                                                                                                                                                               >  3:409796/1‑84 (MQ=255)                  aaCTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAAc                                                                                                                                                                               <  1:409816/84‑1 (MQ=255)                        gATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATa                                                     >  2:409983/1‑200 (MQ=255)                                     gtaaaCTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGt                                                                                                                                                        >  2:595196/3‑88 (MQ=255)                                     gCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGt                                                                                                                                                        <  4:595132/88‑1 (MQ=255)                                          cTATCTTGCAATCGAGAGTTAATGTATTACCatatat                                                                                                                                                                                                      <  3:556670/37‑1 (MQ=255)                                          cTATCTTGCAATCGAGAGTTAATGTATTACCatatat                                                                                                                                                                                                      >  1:556703/1‑37 (MQ=255)                                                         gagTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTg                                                                               >  1:307921/1‑141 (MQ=255)                                                                      aCCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTTTAtt                                                                           >  3:95607/1‑132 (MQ=255)                                                                      aCCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGc                                                         >  4:298868/1‑150 (MQ=255)                                                                       ccATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGAcc                                                                                                                     <  4:485112/89‑1 (MQ=255)                                                                       ccATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGAcc                                                                                                                     >  2:485170/1‑89 (MQ=255)                                                                       ccATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTAttt                                                                          >  3:552607/1‑132 (MQ=255)                                                                          tatatTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATa                                                     >  4:769/1‑150 (MQ=255)                                                                           atatTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTATGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATAc  >  2:14670/1‑200 (MQ=255)                                                                           atatTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGt                                                                                                                                                        <  1:523702/50‑1 (MQ=255)                                                                           atatTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGt                                                                                                                                                        >  3:523670/1‑50 (MQ=255)                                                                           atatTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAacac                                                                                                                                         >  1:466716/1‑65 (MQ=255)                                                                           atatTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAacac                                                                                                                                         <  3:466686/65‑1 (MQ=255)                                                                           atatTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGTGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTccc                                                                       <  4:214126/131‑1 (MQ=255)                                                                           atatTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGTGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTccc                                                                       >  2:214140/1‑131 (MQ=255)                                                                           atatTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCAc                                                                                                               >  1:302790/1‑91 (MQ=255)                                                                           atatTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCAc                                                                                                               <  3:302771/91‑1 (MQ=255)                                                                           atatTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTAt                                                                            >  1:513555/1‑126 (MQ=255)                                                                           atagTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTAt                                                                            <  3:513523/126‑1 (MQ=255)                                                                              ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAac                                                                                                                                           <  4:261627/60‑1 (MQ=255)                                                                              ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAac                                                                                                                                           >  1:7318/1‑60 (MQ=255)                                                                              ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAac                                                                                                                                           <  3:7317/60‑1 (MQ=255)                                                                              ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAac                                                                                                                                           >  2:261654/1‑60 (MQ=255)                                                                              ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAaat                                                                                                     <  4:89205/98‑1 (MQ=255)                                                                              ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAaat                                                                                                     >  3:474708/1‑98 (MQ=255)                                                                              ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAaat                                                                                                     >  2:89213/1‑98 (MQ=255)                                                                              ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAaat                                                                                                     <  1:474738/98‑1 (MQ=255)                                                                              ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCa                                                                   >  3:238089/1‑132 (MQ=255)                                                                              ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAg                                                          <  1:238103/141‑1 (MQ=255)                                                                              ttAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAg                                                          >  1:122375/1‑141 (MQ=255)                                                                              |                                                                                                                                                                                                     ACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATAC  >  NC_000913/4477080‑4477353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.