| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2091589 | 84 (0.890) | 3 (0.030) | 3/286 | 10.7 | 3.3% | coding (493/1305 nt) | hisD | bifunctional histidinal dehydrogenase/ histidinol dehydrogenase |
| ? | NC_000913 | = 2091646 | 98 (1.100) | coding (550/1305 nt) | hisD | bifunctional histidinal dehydrogenase/ histidinol dehydrogenase | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
GAAACCTTCCACACTGCGCAAAAACTGCCGCCGGTAGATGTAGAAACGCAGCCAGGCGTGCGTTGCCAGCAGGTCACGCGTCCGGTAGCTTCAGTTGGGTTGTATATTCCTGGCGGCTCCGCCCCGCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTAAAAAAGTGGTGCTGTGCTCACCGCCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2091382‑2091589‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccgaCGTTAAACACGTCCTGCACACCGCACAGCTGCGCCGCATAAAGGATCTCATCGGCAATCGGCGGCGGTGAGCACAGCACCACTTTTTTACAGCCCGCAATACTCGCCGGAGTCGCCAGCATTAATACCGTTGAGAAGAGCGGGGCGGAGCCGCCAGGAATATACA < NC_000913/2091646‑2091482 GAAACCTTCCACACTGCGCAAAACCTGCCGCCGGTAGATGTAGAAACGCAGCCAGGCGTGCGTTGCCAGCAGGTCACGCGTCCGGTAGCTTCAGTTGGGTTGTATATTCCTGGCGGCTCCGCCCCGCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTAAAAAAGTGGTGCTGTGCTCACC < 1:110430/200‑1GAAACCTTCCACACTGCGCAAAAACTGCCGCCGGTAGATGTAGAAACGCAGCCAGGCGTGCGTTGCCAGCAGGTCACGCGTCCGGTAGCTTCAGTTGGGTTGTATATTCCTGGCGGCTCCGCCCCGCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTAAAAAAGTGGTGCTGTGCTCACC > 1:100230/1‑200 ACCTTCCACACTGCGCAAAAACTGCCGCCGGTAGATGTAGAAACGCAGCCAGGCGTGCGTTGCCAGCAGGTCACGCGTCCGGTAGCTTCAGTTGGGTTGTATATTCCTGGCGGCTCCGCCCCGCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTACAAAAGTGGTGCTTTGCTCACCGCC > 1:393594/1‑200 CCTTCCACACTGCGCAAAAACTGCCGCCGGTAGATGTAGAAACGCAGCCAGGCGTGCGTTGCCAGCAGGTCACGCGTCCGGTAGCTTCAGTTGGGTTGTATATTCCTGGCGGCTCCGCCCCGCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTAAAAAAGTGGTGCTGTGCTCACCGCCG > 1:446734/1‑200 CTTCCACACTGCGCAAAAACTGCCGCCGGTAGATGTAGAAACGCAGCCAGGCGTGCGTTGCCAGCAGGTCACGCGTCCGGTAGCTTCAGTTGGGTTGTATATTCCTGGCGGCTCCGCCCCGCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTAAAAAAGTGGTGCTGTGCTCACCGCCGC > 1:316635/1‑200 GTTGCCAGCAGGTCACGCGTCCGGTAGCTTCAGTTGGGTTGTATATTCCTGGCGGCTCCGCCCCGCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTAAAAAAGTGGTGCTGTGCTCACCGC > 4:626308/1‑141 TTGCCAGCAGGTCACGCGTCCGGTAGCTTCAGTTGGGTTGTATATTCCTGGCGGCTCCGCCCCGCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTAAAAAAGTGGTGCTGTGCTCACCGCC > 4:525383/1‑141 GCAGGTCACGCGTCCGGTAGCTTCAGTTGGGTTGTATATTCCTGGCGGCTCCGCCCCGCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTAAAAAAGTGGTGCTGTGCTCACC < 3:237470/132‑1 GCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTAAAAAAGTGGTGCTGTGCTCACCGCCGCCGACGTTAAACACGTCCTGCACACCGCACAGCTGCGCCGCATAAAGGATCTCATCGGCAATCGGCGCCGGTGGGCACAGCACCACTTTTTTACAGCCCGCAATACTCGCCGGAGTCGCCA > 1:649749/1‑200 CTGTAAAAAAGTGGTGCTGTGCTCACCGCCGCCGACGTTAAACACGTCCTGCACACCGCACAGCTGCGCCGCATAAAGGATCTCATCGGCAATCGGCGGCGGTGAGCACAGCACCACTTTTTTACAGCCCGCAATACTCGCCGGAGTCGCCAGCATTAATACCGTTGAGAAGAGCGGGGCGGAGCCGCCAGGAATATACA > 1:223606/1‑200 GTGCTGTGCTCACCGCCGCCGACGTTAAACACGTCCTGCACACCGCACAGCTGCGCCGCATAAAGGATCTCATCGGCAATCGGCGGCGGTGAGCACAGCACCACTTTTTTACAGCCCGCAATACTCGCCGGAGTCGCCAGC > 4:202671/1‑141 ggCGACGTTAAACACGTCCTGCACACCGCACAGCGGCGCCGCAGAAAGGATCTCATCGGCAATCGGCGGCGGTGAGCACAGCACCACTTTTTTACAGCCCGCAATGCTCGCCGGAGTCGCCAGCATTAATACCGTTGAGAAGAGCGGGGC < 2:815681/148‑1 ACGTTAAACACGTCCTGCACACCGCACAGCTGCGCCGCATAAAGGATCTCATCGGCAATCGGCGGCGGTGAGCACAGCACCACTTTTTTACAGCCCGCAATACTCGCCGGAGTCGCCAGCATTAATACCGTTGAGAAGAGC < 4:455498/141‑1 GAAACCTTCCACACTGCGCAAAAACTGCCGCCGGTAGATGTAGAAACGCAGCCAGGCGTGCGTTGCCAGCAGGTCACGCGTCCGGTAGCTTCAGTTGGGTTGTATATTCCTGGCGGCTCCGCCCCGCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTAAAAAAGTGGTGCTGTGCTCACCGCCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2091382‑2091589‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccgaCGTTAAACACGTCCTGCACACCGCACAGCTGCGCCGCATAAAGGATCTCATCGGCAATCGGCGGCGGTGAGCACAGCACCACTTTTTTACAGCCCGCAATACTCGCCGGAGTCGCCAGCATTAATACCGTTGAGAAGAGCGGGGCGGAGCCGCCAGGAATATACA < NC_000913/2091646‑2091482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |