Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2469147	2469801	655	41 [37]	[31] 43	gtrS	serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

ATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGACATACCAGCATTTACATATGACTTACC  >  NC_000913/2468955‑2469282                                                                                                                                                                                                |                                                                                                                                         atTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCa                                                                                                                                  >  1:452962/1‑200 (MQ=255)  ttttAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCAt                                                                                                                                 <  1:15687/200‑1 (MQ=255)                             cTGTTAGGGGATATCCTTCACTACTTGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTAttt                                                                                                      >  1:69935/1‑200 (MQ=255)                                           ccTTCACTACTTGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATaa                                                                                                                                          <  2:169008/150‑1 (MQ=255)                                                    ctTGTTTCAATACTGTTTTTAGGTGAAATTCGGATATTTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATaa                                                                                                                                          <  4:263826/141‑1 (MQ=255)                                                      tGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTg                                                                                                                               <  2:188725/150‑1 (MQ=255)                                                      tGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTg                                                                                                                               <  2:264117/150‑1 (MQ=255)                                                         ttCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGtat                                                                                                                            <  2:82957/150‑1 (MQ=255)                                                               aCTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTg                                                                                                                               <  4:327866/141‑1 (MQ=255)                                                               aCTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTg                                                                                                                               <  4:137616/141‑1 (MQ=255)                                                               aCTGGTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGAGAAGATATTGGACGCACATACATTGAAACCAAAAAACGACCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTg                                                                                                                               <  4:282569/141‑1 (MQ=255)                                                                      ttAAGTGGAATTCCGATAATTGGAATAGGAGTATTAGGTGAATATCTGGGACCAACATACAATGCAACCAAAAAACACCCGAAATAAAAAATAGTGCGAGTCAAAAAATTAATAAAGCGATAAAAGTATCATTGTATATATCttttgttt                                                                                                               <  2:347222/150‑1 (MQ=255)                                                                       tAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATc                                                                                                                       <  4:570883/141‑1 (MQ=255)                                                                       tAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATc                                                                                                                       <  4:507485/141‑1 (MQ=255)                                                                             gAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTg                                                                                                                               >  4:29271/1‑127 (MQ=255)                                                                             gAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTg                                                                                                                               <  3:29270/127‑1 (MQ=255)                                                                                ttCAGATGAATGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATc                                                                                                                       <  3:214780/132‑1 (MQ=255)                                                                                       gatTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAg                                                                                                                                       >  4:66276/1‑109 (MQ=255)                                                                                       gatTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAg                                                                                                                                       <  3:66271/109‑1 (MQ=255)                                                                                            gAATTGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATc                                                                 >  1:473222/1‑174 (MQ=255)                                                                                                       ttAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAatga                                                                              <  2:69929/150‑1 (MQ=255)                                                                                                            tGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAg                                                                                                                                       >  2:708278/1‑88 (MQ=255)                                                                                                            tGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAg                                                                                                                                       <  1:708345/88‑1 (MQ=255)                                                                                                              aaTATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTg                                                                                                                               <  2:95007/94‑1 (MQ=255)                                                                                                              aaTATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTg                                                                                                                               >  1:95013/1‑94 (MQ=255)                                                                                                                    ttGTACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCCTCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATc                                                                 <  2:473169/150‑1 (MQ=255)                                                                                                                      ggACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTaa                                                                        >  4:399274/1‑141 (MQ=255)                                                                                                                         cGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATa                                                                     >  4:577600/1‑141 (MQ=255)                                                                                                                                      aaaCCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATc                                                                 <  3:364784/132‑1 (MQ=255)                                                                                                                                           aaaaaaCGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGAtt                                                            <  3:399258/132‑1 (MQ=255)                                                                                                                                                            catcatCAAGAGAGTCAAAAAATGAATAAAGCAATaa                                                                                                                                          >  1:78304/1‑37 (MQ=255)                                                                                                                                                            catcatCAAGAGAGTCAAAAAATGAATAAAGCAATaa                                                                                                                                          <  2:78298/37‑1 (MQ=255)                                                                                                                                                                       gagTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGACATAcc                       <  4:19367/141‑1 (MQ=255)                                                                                                                                                                        agTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGACATACCAGCATTTACa             <  2:452911/150‑1 (MQ=255)                                                                                                                                                                           cAAAAAATGAATAAAGCACTAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAAAGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGAc                            <  3:488229/132‑1 (MQ=255)                                                                                                                                                                           cAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGAc                            <  3:577567/132‑1 (MQ=255)                                                                                                                                                                           cAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTAGCGCCGTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGAc                            <  3:499323/132‑1 (MQ=255)                                                                                                                                                                                 aTGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGACATACCAGCATTTACa             <  4:276008/141‑1 (MQ=255)                                                                                                                                                                                   gAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTGTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGACATACCAGCATTTACATATGACTTAcc  <  2:28896/150‑1 (MQ=255)                                                                                                                                                                                           cAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGACATACCAGCATTTACATATGACTTAc   <  4:44494/141‑1 (MQ=255)                                                                                                                                                                                                aaaGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGACATACCAGCATTTACATATGAc       <  3:72534/132‑1 (MQ=255)                                                                                                                                                                                                |                                                                                                                                         ATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGACATACCAGCATTTACATATGACTTACC  >  NC_000913/2468955‑2469282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.