| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_000913 | 3,799,290 | 0 | T→C | 100.0% | 3.7 | 3 | K8R (AAA→AGA) | waaU | lipopolysaccharide core biosynthesis |
| Rejected: E-value exceeds prediction threshold. | ||||||||||
| Reads supporting (aligned to +/- strand): new base (1/1): ref base (1/0): total (2/1) | ||||||||||
TTATTACGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATATTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCT > NC_000913/3799227‑3799411 | ttattaCGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTCTGTGAAAAGTTCCTAAGCGCATTTTTATAc > 3:478893/1‑94 (MQ=255)ttattaCGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTCTGTGAAAAGTTCCTAAGCGCATTTTTATAc < 4:478915/94‑1 (MQ=255) gATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATATTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTTTCATATCTTTTGAttct > 2:415511/1‑150 (MQ=255) | TTATTACGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATATTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCT > NC_000913/3799227‑3799411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |