BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,735,003	A→G	T9A (ACA→GCA)	xylR →	xylose divergent operon transcriptional activator

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_000913	3,735,003	0	A→G	100.0%	286.2	202	T9A (ACA→GCA)	xylR	xylose divergent operon transcriptional activator
Reads supporting (aligned to +/- strand): new base (42/69): ref base (45/46): total (87/115)
Fisher's exact test strand distribution p-value = 1.17e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.36e-02

Only 100 of 208 total aligned reads displayed.

GTATGATGGATGTACCGACCTTCTGGCAGTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCT  >  NC_000913/3734804‑3735200

gTATGATGGATGTACCGACCTTCTGGCAGTATATCGTTAAAGGTGCGATTTTGTTGCTGGTAGTATGGATGGACTCCGCAACCACACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATca                                                                                                                                                                                                       >  1:649757/1‑200 (MQ=255)

      tggatgTACCGACCTTCTGGGAGTATATCGTGAAAGGGGAGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGTAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTAc                                                                                                                                                                                                 <  1:155985/200‑1 (MQ=255)

      tggatgTACCGACCTTCTGGCAGTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTAc                                                                                                                                                                                                 >  1:5980/1‑200 (MQ=255)

      tggatgTACCGACCTTCTGGCAGTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTAc                                                                                                                                                                                                 >  1:731025/1‑200 (MQ=255)

      tggatgTACCGACCTTCTGGCAGTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTAc                                                                                                                                                                                                 >  1:715822/1‑200 (MQ=255)

      tggatgTACCGACCTGCTGGCAGTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTAc                                                                                                                                                                                                 <  1:262952/200‑1 (MQ=255)

           gTACCGACCTTCTGGCAGTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTAACGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTc                                                                                                                                                                                            >  1:280077/1‑200 (MQ=255)

                          cAGTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGcc                                                                                                                                                                             <  1:781865/200‑1 (MQ=255)

                            gTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTc                                                                                                                                                                                            <  1:744936/183‑1 (MQ=255)

                                          gTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGgtag                                                                                                                                                             >  1:187328/1‑200 (MQ=255)

                                               aTTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGaa                                                                                                                                                        <  1:252868/200‑1 (MQ=255)

                                                         tGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAgggg                                                                                                                                              <  1:684300/200‑1 (MQ=255)

                                                          ggCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTg                                                                                                                                                                                               >  2:245801/1‑150 (MQ=255)

                                                              gTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCAt                                                                                                                                                                                                    >  4:550433/1‑141 (MQ=255)

                                                              gTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCa                                                                                                                                                                                           >  2:158263/1‑150 (MQ=255)

                                                              gTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCa                                                                                                                                                                                           >  2:785872/1‑150 (MQ=255)

                                                              gTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAatat                                                                                                                                         <  1:639719/200‑1 (MQ=255)

                                                              gTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACAt                                                                                                                                                                                                    >  4:425782/1‑141 (MQ=255)

                                                              gTATGGATGGACTCCGCAACCAAACGCCGGTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTGAACGTGACCGCATCGCAt                                                                                                                                                                                                    >  4:289975/1‑141 (MQ=255)

                                                              atATGGATGGACTCCGCAACCAAACGCCGTGCTTGATTTTGATAAAAATTTTCTCAAAGCCAGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAatat                                                                                                                                         <  1:762904/199‑1 (MQ=255)

                                                               tATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTcga                                                                                                                                                                                          <  2:78277/150‑3 (MQ=255)

                                                                atggatggACTACGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGGATTACCGGGTTTGAGATTTTGCATGAGTCAGCAGGAAAAGAACCATGGTTACTAAACGTCACCGAATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAatatat                                                                                                                                       <  1:206176/200‑3 (MQ=255)

                                                                 tggatggaCTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTa                                                                                                                                      >  1:421998/1‑200 (MQ=255)

                                                                     tggaCTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAgg                                                                                                                                  <  1:35579/200‑1 (MQ=255)

                                                                         cTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAAt                                                                                                                                                                                         >  4:449439/1‑141 (MQ=255)

                                                                          tCCGCAACCAAACGCCGTTCTTGATTTTGATAACAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTAc                                                                                                                                                                                                 <  3:73907/132‑1 (MQ=255)

                                                                          tCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTAc                                                                                                                                                                                                 <  3:338707/132‑1 (MQ=255)

                                                                          tCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTAc                                                                                                                                                                                                 <  3:489506/132‑1 (MQ=255)

                                                                           ccGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGc                                                                                                                                                                                       <  4:497646/141‑1 (MQ=255)

                                                                                aCCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATa                                                                                                                                                                                  >  4:157707/1‑141 (MQ=255)

                                                                                aCCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATa                                                                                                                                                                                  >  4:7985/1‑141 (MQ=255)

                                                                                aCCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATg                                                                                                                                                                         >  2:166168/1‑150 (MQ=255)

                                                                                aCCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATa                                                                                                                                                                                  >  4:601998/1‑141 (MQ=255)

                                                                                aCCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATg                                                                                                                                                                         >  2:676139/1‑150 (MQ=255)

                                                                                 ccAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTCAACGTCACCGCATCACATTACTGTTCAATGCCAATaa                                                                                                                                                                                 >  4:463510/1‑141 (MQ=255)

                                                                                 ccAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACTGCATCGCATTACTGTTCAATGCCAATAAATCTTATGa                                                                                                                                                                        >  2:424226/1‑150 (MQ=255)

                                                                                 ccAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCgg                                                                                                                      >  1:329308/1‑200 (MQ=255)

                                                                                   aaaCGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGaa                                                                                                                    <  1:356534/200‑1 (MQ=255)

                                                                                            tCTTGATTTTGTTAAAAATTTTCTCAAAGCCGGTTAAGTATTACCTGTTTTGAGGTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGTATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGgtag                                                                                                                                                             <  2:749394/150‑1 (MQ=255)

                                                                                               tGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGtagtag                                                                                                                                                          <  2:652554/150‑1 (MQ=255)

                                                                                                    ttGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGAc                                                                                                                                                                       <  3:574212/132‑1 (MQ=255)

                                                                                                    ttGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGAc                                                                                                                                                                       <  3:425766/132‑1 (MQ=255)

                                                                                                      gATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCg                                                                                                                                                                     >  3:26863/1‑132 (MQ=255)

                                                                                                           aaaTTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATTACCGGCCGGTAGTAGAAGGCGTCgggg                                                                                                                                              >  2:258331/1‑150 (MQ=255)

                                                                                                            aaTTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGgt                                                                                                                                                               <  3:235395/132‑1 (MQ=255)

                                                                                                              ttttCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCg                                                                                                                                                    <  4:625009/141‑1 (MQ=255)

                                                                                                                 tctcAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCcgc                                                                                      >  1:103516/1‑200 (MQ=255)

                                                                                                                   tcAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGaa                                                                                                                                                        <  3:289639/132‑1 (MQ=255)

                                                                                                                     aaagggggTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGGTTACTAAACGTCGCCGCGTCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAgg                                                                                                                                                      <  3:466331/126‑1 (MQ=255)

                                                                                                                      aaGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAg                                                                                                                                   <  2:741732/150‑1 (MQ=255)

                                                                                                                         ccGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAatat                                                                                                                                         <  4:354559/141‑1 (MQ=255)

                                                                                                                            gTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTa                                                                                                                                      <  4:579754/141‑1 (MQ=255)

                                                                                                                               aCGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACaa                                                                                                                          >  2:51353/1‑150 (MQ=255)

                                                                                                                               aCGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATaa                                                                        >  1:95460/1‑200 (MQ=255)

                                                                                                                                cGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAgg                                                                                                                                  >  4:56252/1‑141 (MQ=255)

                                                                                                                                cGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAAt                                                                                                                         >  2:20565/1‑150 (MQ=255)

                                                                                                                                   aTTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGTGAATATTTACAGGCGTCACAATCgg                                                                                                                      >  2:164042/1‑150 (MQ=255)

                                                                                                                                   aTTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATc                                                                    <  1:164054/200‑1 (MQ=255)

                                                                                                                                    ttACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATAttt                                                                                                                                       <  3:306104/132‑1 (MQ=255)

                                                                                                                                         ggTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAgg                                                                                                                                  <  3:333391/132‑1 (MQ=255)

                                                                                                                                         ggTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGAc                                                              <  1:616386/200‑1 (MQ=255)

                                                                                                                                         ggTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGAc                                                              <  1:460161/200‑1 (MQ=255)

                                                                                                                                         ggTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAgg                                                                                                                                  <  3:189171/132‑1 (MQ=255)

                                                                                                                                         ggTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGAc                                                              <  1:676204/200‑1 (MQ=255)

                                                                                                                                         ggTTGTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAgg                                                                                                                                  <  3:156247/132‑1 (MQ=255)

                                                                                                                                          gTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATc                                                                                                                        >  4:247628/1‑141 (MQ=255)

                                                                                                                                          gTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACt                                                             >  1:430892/1‑200 (MQ=255)

                                                                                                                                               gAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATAttt                                                                                                          <  2:233470/150‑1 (MQ=255)

                                                                                                                                                   ttttGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGgag                                                    <  1:769620/200‑1 (MQ=255)

                                                                                                                                                   ttttGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGgag                                                    <  1:487726/200‑1 (MQ=255)

                                                                                                                                                   ttttGCATGATTCAGCAGGAAAAAAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGCGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGgag                                                    <  1:365283/200‑1 (MQ=255)

                                                                                                                                                         aTGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCg                                              <  1:786620/200‑1 (MQ=255)

                                                                                                                                                            aTTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATTCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAagaaga                                                                                             >  2:499631/1‑150 (MQ=255)

                                                                                                                                                             ttCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGat                                                                                                              <  3:378609/132‑1 (MQ=255)

                                                                                                                                                                agcagGAAAAGAACCATGTTTACTAAACGTCACAGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTc                                                                                         <  2:115262/150‑1 (MQ=255)

                                                                                                                                                                 gcagGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATAttt                                                                                                          <  3:247617/132‑1 (MQ=255)

                                                                                                                                                                 gcagGAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGcc                                      >  1:167995/1‑200 (MQ=255)

                                                                                                                                                                    ggAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAAGATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCagcg                                                                                     >  2:598770/1‑150 (MQ=255)

                                                                                                                                                                     gAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACt                                  >  1:137100/1‑200 (MQ=255)

                                                                                                                                                                     gAAAAGAACCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATAAAGGAc                                                              >  1:533493/1‑172 (MQ=255)

                                                                                                                                                                           aaCCATGTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCAAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCAt                                                                              <  2:779556/150‑1 (MQ=255)

                                                                                                                                                                            aCCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTcgacga                           >  1:516214/1‑200 (MQ=255)

                                                                                                                                                                               aTGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCAGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTTGACGACaa                        >  1:220175/1‑200 (MQ=255)

                                                                                                                                                                                 gTTTACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATaa                                                                        <  2:772230/150‑1 (MQ=255)

                                                                                                                                                                                    tACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGaa                                                                                                                                                        <  4:32245/67‑1 (MQ=255)

                                                                                                                                                                                    tACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGaa                                                                                                                                                        >  3:32244/1‑67 (MQ=255)

                                                                                                                                                                                    tACTAAACGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCAt                                                                              >  4:558085/1‑141 (MQ=255)

                                                                                                                                                                                          aCGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGc             >  1:87959/1‑200 (MQ=255)

                                                                                                                                                                                           cGTCACCGCATCGCATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCa            <  1:47991/200‑1 (MQ=255)

                                                                                                                                                                                           cGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTCTGCCCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACACTCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGAc                                                              <  2:301808/150‑1 (MQ=255)

                                                                                                                                                                                                   cATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTcaca                                                                                                                           <  4:107085/81‑1 (MQ=255)

                                                                                                                                                                                                   cATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTcaca                                                                                                                           >  3:107081/1‑81 (MQ=255)

                                                                                                                                                                                                   cATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCgctgg    >  1:386292/1‑200 (MQ=255)

                                                                                                                                                                                                   cATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGAATTGATAAACTCAAGGa                                                               >  4:221605/1‑141 (MQ=255)

                                                                                                                                                                                                    aTCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGAGAATATTTACAGGCGTCACAATCGGAATGAGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGAc                                                              <  4:414132/141‑1 (MQ=255)

                                                                                                                                                                                                     tCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGTGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATaaaa                                                                      >  3:449033/1‑132 (MQ=255)

                                                                                                                                                                                                     tCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGgag                                                    >  1:555717/1‑150 (MQ=255)

                                                                                                                                                                                                     tCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGgag                                                    <  2:555659/150‑1 (MQ=255)

                                                                                                                                                                                                     tCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCgctggct  >  1:205328/1‑200 (MQ=255)

                                                                                                                                                                                                     tCACATTACTGTTCAATGCCAATAAAGACTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGgag                                                    <  2:190675/150‑1 (MQ=255)

GTATGATGGATGTACCGACCTTCTGGCAGTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGATTTTGATAAAAATTTTCTCAAAGCCGGTTACGTATTACCGGTTTTGAGTTTTTGCATGATTCAGCAGGAAAAGAACCATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCT  >  NC_000913/3734804‑3735200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.