Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,777,535	C→T	T46M (ACG→ATG)	lldP →	L‑lactate permease

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_000913	3,777,535	0	C→T	100.0%	328.6	87	T46M (ACG→ATG)	lldP	L‑lactate permease
Reads supporting (aligned to +/- strand):  new base (36/51):  ref base (0/0):  total (36/51)

GTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGACGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGATCTCGGTGAAAACCGGGCAGTTTGACATCATTCGCTCGTCTA  >  NC_000913/3777338‑3777717                                                                                                                                                                                                      |                                                                                                                                                                                       gtgACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATgg                                                                                                                                                                                      >  1:800981/1‑200 (MQ=255)                 cAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGTTCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGc                                                                                                                                                                      <  1:777740/200‑1 (MQ=255)                   aCAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCg                                                                                                                                                                    >  1:796769/1‑200 (MQ=255)                           aTTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTg                                                                                                                                                            >  1:577682/1‑200 (MQ=255)                                     gtgCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCtata                                                                                                                                                  >  1:99607/1‑200 (MQ=255)                                      tgCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATaa                                                                                                                                                 <  1:625523/200‑1 (MQ=255)                                      tgCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATaa                                                                                                                                                 <  1:654545/200‑1 (MQ=255)                                      tgCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATaa                                                                                                                                                 <  1:412024/200‑1 (MQ=255)                                      tgCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATaa                                                                                                                                                 <  1:810886/200‑1 (MQ=255)                                      tgCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATaa                                                                                                                                                 <  1:203518/200‑1 (MQ=255)                                       gCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACCAAACTACGATCCCGCCGGGAACACCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTTGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATaaa                                                                                                                                                >  1:511396/1‑200 (MQ=255)                                            gACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGcc                                                                                                                                           >  1:663524/1‑200 (MQ=255)                                            gACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCACATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGcc                                                                                                                                           >  1:540578/1‑200 (MQ=255)                                              cTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCgg                                                                                                                                         >  1:250400/1‑200 (MQ=255)                                                   ggAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGGTAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTTATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATgg                                                                                                                                                                                      <  2:226715/150‑1 (MQ=255)                                                      gaCCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAAc                                                                                                                                 <  1:231963/200‑1 (MQ=255)                                                      gaCCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAAc                                                                                                                                 >  1:217295/1‑200 (MQ=255)                                                            cAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATgg                                                                                                                                                                                      >  4:74035/1‑141 (MQ=255)                                                               ttaagctcaGGCAACCAAACTACGCTCCCGCCGGGAATATCTGGCTCTCCAGTCTGGTAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCGTGTTAAGCTCAAACTGAAAGAATACGTCGCCTCCTCGTGGATGGTGGCAATCGccc                                                                                                                                                                          <  2:737591/145‑1 (MQ=255)                                                                    ctctGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATc                                                                                                                                                                              <  4:77661/141‑1 (MQ=255)                                                                    ctctGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCggt                                                                                                                   <  1:717092/200‑1 (MQ=255)                                                                              aaaaCTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCg                                                                                                                                                                    <  4:106769/141‑1 (MQ=255)                                                                              aaaaCTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGt                                                                                                         <  1:576467/200‑1 (MQ=255)                                                                               aaaCTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGc                                                                                                                                                                            >  3:28535/1‑132 (MQ=255)                                                                                  cTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGc                                                                                                                                                                >  4:403489/1‑141 (MQ=255)                                                                                       aTCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCg                                                                                                                                                                    <  3:428399/132‑1 (MQ=255)                                                                                        tCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATaa                                                                                                                                                 <  2:761087/150‑1 (MQ=255)                                                                                             ccgTGAATATCTGGTTTTCCAGTCTGATAGCATCGCTTCCCATCGTGTTTTTCATCTTGGCGCTGATTAAGCTCAATCTGAAAGGATACGTAGCCGCCTCGTGTATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGc                                                                                                                                            <  2:650062/150‑1 (MQ=255)                                                                                             ccgGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGc                                                                                                                                            <  2:114936/150‑1 (MQ=255)                                                                                                ggAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTgg                                                                                       >  1:235902/1‑200 (MQ=255)                                                                                                 gAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATaa                                                                                                                                                 <  4:610411/141‑1 (MQ=255)                                                                                                   atatCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGc                                                                                                                                                                      <  2:731595/118‑1 (MQ=255)                                                                                                   atatCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGc                                                                                                                                                                      >  1:731662/1‑118 (MQ=255)                                                                                                   atatCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGccc                                                                                    >  1:163880/1‑200 (MQ=255)                                                                                                   atatCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGccc                                                                                    >  1:473937/1‑200 (MQ=255)                                                                                                         ggCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCATGGCTTTGCTGTTCTATAAAATGCCgg                                                                                                                                         <  4:277957/141‑1 (MQ=255)                                                                                                             ttCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAATTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGa                                                                          >  1:504830/1‑200 (MQ=255)                                                                                                             ttCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGa                                                                          <  1:746529/200‑1 (MQ=255)                                                                                                               ccAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGc                                                                                                                                            <  3:167238/132‑1 (MQ=255)                                                                                                                  gTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCt                                                                                                                       >  2:563471/1‑150 (MQ=255)                                                                                                                  gTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCatt                                                                     >  1:804858/1‑200 (MQ=255)                                                                                                                  gTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCatt                                                                     >  1:664552/1‑200 (MQ=255)                                                                                                                    cTGATAGTATCGCTTCCAGTCCTGTAGTTATTCTTTGCGCTGATTAAGCGCAGGCTGGAAGGATACATCACCGCCTCATGGGTGGAAGCAATCGACCGTGCCGTGACTTTGCTGTTCTATAAAATGCCGGTc                                                                                                                                       <  3:74435/132‑1 (MQ=255)                                                                                                                    cTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCattat                                                                   <  1:92026/200‑1 (MQ=255)                                                                                                                      gATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCggt                                                                                                                   >  2:19831/1‑150 (MQ=255)                                                                                                                      gATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGAGCATTATTg                                                                 >  1:270281/1‑200 (MQ=255)                                                                                                                        tAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTgg                                                                                                                          >  4:511853/1‑141 (MQ=255)                                                                                                                        tAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCggtgg                                                                                                                 <  2:346187/150‑1 (MQ=255)                                                                                                                               gCTTCCCATCCTGTTTTGCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATgg                                                                                                          <  2:250248/150‑1 (MQ=255)                                                                                                                                cTTCCTATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGCCGCCGCCTCGCGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATATAATGCCGGTCGCCAACgggccg                                                                                                                           >  3:233727/1‑130 (MQ=255)                                                                                                                                cTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGt                                                                                                         >  2:257451/1‑150 (MQ=255)                                                                                                                                cTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGt                                                                                                         <  2:448663/150‑1 (MQ=255)                                                                                                                                 ttCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGATGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCggtgg                                                                                                                 <  4:283901/141‑1 (MQ=255)                                                                                                                                    ccATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTc                                                   <  1:210276/200‑1 (MQ=255)                                                                                                                                      aTCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGc                                                                                                                                            >  3:410058/1‑109 (MQ=255)                                                                                                                                      aTCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGc                                                                                                                                            <  4:410074/109‑1 (MQ=255)                                                                                                                                        ccTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATgg                                                                                                          <  4:612957/141‑1 (MQ=255)                                                                                                                                         cTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGACGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTGTATaa                                              >  1:583121/1‑200 (MQ=255)                                                                                                                                           gTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGa                                            >  1:483018/1‑200 (MQ=255)                                                                                                                                                   tcttTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGATCTCGGTg                                    >  1:758026/1‑200 (MQ=255)                                                                                                                                                    cttTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGcc                                                                                     <  2:549436/150‑1 (MQ=255)                                                                                                                                                      ttGCGCTGATTGAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGCCAATCTCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGt                                                                                            <  4:386357/141‑1 (MQ=255)                                                                                                                                                      ttGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGt                                                                                            <  4:28019/141‑1 (MQ=255)                                                                                                                                                             gATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTCTGGTTTCTTCTACgc                                                                                              >  3:5004/1‑131 (MQ=255)                                                                                                                                                             gATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGcc                                                                                     >  4:169992/1‑141 (MQ=255)                                                                                                                                                             gATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTGGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCGAACGCGCTGGCCGCggtgg                                                                                                                 >  3:15675/1‑113 (MQ=255)                                                                                                                                                                 aaGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATc                                                                        <  2:217283/150‑1 (MQ=255)                                                                                                                                                                   gCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATcgc                                                                               >  4:587049/1‑141 (MQ=255)                                                                                                                                                                     tCAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGc                                                                                      <  3:600235/132‑1 (MQ=255)                                                                                                                                                                      cAAACTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCattat                                                                   <  2:279602/150‑1 (MQ=255)                                                                                                                                                                       aaaCTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGATCTCGGTGAAAACCGGGCAGTTTGAcat                <  1:290445/200‑1 (MQ=255)                                                                                                                                                                       aaaCTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGATCTCGGTGAAAACCGGGCAGTTTGAcat                <  1:555736/200‑1 (MQ=255)                                                                                                                                                                       aaaCTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCGTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGATCTCGGTGAAAACCGGGCAGTTTGAcat                <  1:621330/200‑1 (MQ=255)                                                                                                                                                                        aaCTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGATCTCGGTGAAAACCGGGCAGTTTGAcatc               >  1:673127/1‑200 (MQ=255)                                                                                                                                                                         aCTGAAAGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGc                                                                <  2:313547/150‑1 (MQ=255)                                                                                                                                                                         aCTGAAAGGATACGTCGCCGCCTCGGGGATGGTGGCAAGCGCGCTTGCCGTGGGTTTGCTGTGCTATAATGTGCCGTTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGc                                                                <  2:425657/150‑1 (MQ=255)                                                                                                                                                                              aaGGATACGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGACGGTCGCTAACGAGCTGGCCTCGGGGGTTTATGGTTTCTTCTACGGGGTGTGGCCCATCGCGGGGATCATTATTGAAGCgg                                                           >  2:755833/1‑150 (MQ=255)                                                                                                                                                                                  gtACGTCGCGGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATAGTTTCTTCTGCGGGTTGTGGCCCATCGCGTGGATCATTATTGc                                                                <  4:233737/140‑1 (MQ=255)                                                                                                                                                                                    aCGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAg                                                              <  4:192595/141‑1 (MQ=255)                                                                                                                                                                                     cGTCGCCGCCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGATCTCGGTGAAAACCGGGCAGTTTGACATCATTCGCTCGTCTa  >  1:64445/1‑200 (MQ=255)                                                                                                                                                                                       tCGCCTGCTCGTGGATCGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCatta                                                                    <  3:141278/132‑1 (MQ=255)                                                                                                                                                                                        cgccgcCTCGTGGATGGTGGCACTCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCattat                                                                   <  3:184745/132‑1 (MQ=255)                                                                                                                                                                                        cgccgcCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCattat                                                                   <  3:28248/132‑1 (MQ=255)                                                                                                                                                                                        cgccgcCTCGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCattat                                                                   <  3:418690/132‑1 (MQ=255)                                                                                                                                                                                             ccgcGTGGATGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAGAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAg                                                              <  3:13329/129‑1 (MQ=255)                                                                                                                                                                                             ccTCGTGGATGGTGGCAATCGCCCTTGCCGTTGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGa                                            <  2:788037/150‑1 (MQ=255)                                                                                                                                                                                              cTCGTGGATGGTGGCAATCGCCCTTGCCTTGGCTTTGCTGTTCTAGAACATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGAt                                           <  2:4332/150‑1 (MQ=255)                                                                                                                                                                                                      |                                                                                                                                                                                       GTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGACGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGATCTCGGTGAAAACCGGGCAGTTTGACATCATTCGCTCGTCTA  >  NC_000913/3777338‑3777717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.