New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 117946 =3692 (1.210)127 (0.050) 82/212 21.6 4.0% intergenic (+67/+792) JCVSYN2_00460/JCVSYN2_00465 ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
?CP016816 = 117942 3029 (1.180)intergenic (+63/+796) JCVSYN2_00460/JCVSYN2_00465 ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 3761 total aligned reads displayed.

AAAGGAAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTT  >  CP016816/117814‑118069
                                                                                                                                |                                                                                                                                   
 aaGGAAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGcaacaa                                                                                                                                     <  2:4036192/128‑1 (MQ=255)
  aGGAAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAACCTAAATAAATAATTTTATAAGCAATACCTCTCGGTATTGCTTTTTTTTAAAAATACAAATTTTAAACAGCAACAa‑‑‑t                                                                                                                                 >  2:5938679/1‑128 (MQ=255)
      aaTTGAATAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAGCAGCAACAA‑‑‑tatta                                                                                                                             <  1:2153422/128‑1 (MQ=255)
       aTTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑t                                                                                                                           >  2:2910865/1‑128 (MQ=255)
       aTTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑t                                                                                                                           >  2:5829593/1‑128 (MQ=255)
       aTTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑t                                                                                                                           >  1:3718496/1‑128 (MQ=255)
             gagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattat                                                                                                                     >  1:5018078/1‑128 (MQ=255)
             gagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattat                                                                                                                     <  2:4795516/128‑1 (MQ=255)
               gaagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattagta                                                                                                                   >  2:6412044/1‑128 (MQ=255)
                 agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattattatt                                                                                                                 <  2:5253125/128‑1 (MQ=255)
                  gaaTTAAAAAAAGAGTACGATAGTAAAAATAAAAAACTAAATAAATAATATTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattattatta                                                                                                                <  1:1001780/128‑1 (MQ=255)
                  gaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAt‑‑‑tatta‑ttattattatta                                                                                                                <  2:5586850/128‑1 (MQ=255)
                  gaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattattatta                                                                                                                <  1:1228788/128‑1 (MQ=255)
                  gaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattattatta                                                                                                                >  1:3579935/1‑128 (MQ=255)
                   aaTGATAATAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAACGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattattattat                                                                                                               <  1:2987748/128‑1 (MQ=255)
                   aaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattattattat                                                                                                               <  2:255425/128‑1 (MQ=255)
                     tGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattattattatta                                                                                                             <  2:1444623/128‑1 (MQ=255)
                      gAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattattattattat                                                                                                            >  1:1839912/1‑128 (MQ=255)
                      gAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattattattattat                                                                                                            >  1:741760/1‑128 (MQ=255)
                        aaaaaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TAtta‑ttattattattattatta                                                                                                          >  1:6088820/1‑128 (MQ=255)
                         aaaaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTAAAAAAGAAAATA‑‑‑TATTA‑TTATTATTATTATtaataa                                                                                                         >  2:3904270/1‑128 (MQ=255)
                           aaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTattaatt                                                                                                       >  1:4395515/1‑128 (MQ=255)
                            aaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑tatta‑ttattattat                                                                                                                  <  2:2412319/116‑1 (MQ=255)
                            aaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTattaatta                                                                                                      <  2:5388694/128‑1 (MQ=255)
                             agagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTAt                                                                                                     <  2:2172143/128‑1 (MQ=255)
                              tagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATAACTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATc                                                                                                    <  1:2716526/127‑1 (MQ=255)
                                gTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCaa                                                                                                  <  2:4912491/128‑1 (MQ=255)
                                gTACGAGAGTAAAAATAAAAAACTAAATAAATAA‑TTTATTAACAATTCCATAAAGTAATTCATTTTTAATAAAAAAAAAATTTTAAAACACAAACA‑‑‑TATTATTTATTTTTA‑TATTatttattaataat                                                                                                 >  1:6466412/1‑123 (MQ=255)
                                 tACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAg                                                                                                 <  2:2318094/128‑1 (MQ=255)
                                   cGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCa                                                                                               >  2:5696279/1‑128 (MQ=255)
                                   cGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCa                                                                                               <  2:3213346/128‑1 (MQ=255)
                                    gagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCat                                                                                              >  1:334999/1‑128 (MQ=255)
                                    gagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCat                                                                                              <  1:3087801/128‑1 (MQ=255)
                                    gagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGAAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAATCat                                                                                              >  1:886071/1‑128 (MQ=255)
                                     agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAATCata                                                                                             >  1:5460092/1‑128 (MQ=255)
                                     agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTAATATTATTAATAATCAAGCata                                                                                             >  1:3479401/1‑128 (MQ=255)
                                     agagTAAAAATAAAAAACTAAATAAATAATTTAATAAGCAATACCTCAAGGTAATGCTTTTTTAAAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TATTTATTATTATTCTTATTTATCAAGCtta                                                                                             >  1:4290275/1‑128 (MQ=255)
                                      gagTATAAATAAATAACTAAATATATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCTACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCatat                                                                                            <  2:5042421/128‑1 (MQ=255)
                                      gagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCatat                                                                                            >  2:1829637/1‑128 (MQ=255)
                                       agTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑‑‑‑TA‑TTATTATTATTATTATTAATTATCAAGCATATAAAt                                                                                        <  2:4286960/128‑1 (MQ=255)
                                          taaaataaaaaACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAAt                                                                                        <  1:6348149/127‑1 (MQ=255)
                                          aaaaataaaaaACTAAATAAATAATTTTATAATCAATAAATTAATTTATTTATTTTTTATAATAATACAAATTTTAAACATCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAAt                                                                                        <  1:5566286/128‑1 (MQ=255)
                                          aaaaataaaaaACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAAt                                                                                        <  2:3628812/128‑1 (MQ=255)
                                          aaaaataaaaaACTAAATAAATAATTTTATAAGCAATAACTCAATGTAATGCTTTTTTATAAAAATACAAATATTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAAt                                                                                        <  1:4744952/128‑1 (MQ=255)
                                              ataaaaaACTAAATAAATAATTTTATAATCAATACCTCAACGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTaa                                                                                    <  1:2864264/128‑1 (MQ=255)
                                                aaaaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAata                                                                                  <  1:5947698/128‑1 (MQ=255)
                                                 aaaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAatat                                                                                 <  2:6313441/128‑1 (MQ=255)
                                                    aaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGat                                                                              <  2:4541647/128‑1 (MQ=255)
                                                    aaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGat                                                                              <  1:1120001/128‑1 (MQ=255)
                                                            aaataaTTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAt                                                                      <  1:5693157/128‑1 (MQ=255)
                                                             aataatTTTATAATCAAAACATAAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAtt                                                                     <  2:4172158/128‑1 (MQ=255)
                                                               taatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAtttt                                                                   <  2:4395515/128‑1 (MQ=255)
                                                                       taAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGAtt                                                           <  2:1105902/128‑1 (MQ=255)
                                                                         aGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATg                                                                                <  2:6630331/105‑1 (MQ=255)
                                                                             aTAACTCAATTTATTTCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGAATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATg                                                     <  2:3524481/128‑1 (MQ=255)
                                                                              tACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGa                                                    <  2:2047772/128‑1 (MQ=255)
                                                                               accttgaGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAtt                                                                     <  1:998801/104‑1 (MQ=255)
                                                                               acatCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGaa                                                   <  2:332050/125‑1 (MQ=255)
                                                                               aCCTCAAGGTATTGATTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGaa                                                   <  2:3109635/128‑1 (MQ=255)
                                                                                  tCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTaa                                                         <  2:5177471/119‑1 (MQ=255)
                                                                                   cAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAAc                                               >  1:2409830/1‑128 (MQ=255)
                                                                                    aaGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACg                                              <  1:1954116/128‑1 (MQ=255)
                                                                                    aaGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACg                                              <  2:3020316/128‑1 (MQ=255)
                                                                                     aGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGa                                             >  1:1319947/1‑128 (MQ=255)
                                                                                      ggTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAATCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAg                                            >  2:3784423/1‑128 (MQ=255)
                                                                                        tATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTg                                                              >  1:6230510/1‑108 (MQ=255)
                                                                                        tATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGtt                                          >  2:2682323/1‑128 (MQ=255)
                                                                                        tATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑‑‑‑TA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTa                                       <  2:733551/128‑1 (MQ=255)
                                                                                         aTTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGttt                                         <  2:5483287/128‑1 (MQ=255)
                                                                                         aTTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGttt                                         <  1:3918769/128‑1 (MQ=255)
                                                                                          ttGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTATGTGATTAAAATGAAAAACTAGtttt                                        >  1:5834917/1‑128 (MQ=255)
                                                                                           tGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTa                                       <  1:1460622/128‑1 (MQ=255)
                                                                                             cTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAat                                     <  1:3222647/128‑1 (MQ=255)
                                                                                             cTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAat                                     <  1:4886397/128‑1 (MQ=255)
                                                                                               tttttATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATTATATACCTATTTTAGGTGATTATAATGAAAAACGAGTTTTAatat                                   >  2:608970/1‑128 (MQ=255)
                                                                                                ttttATAAAAATACAAATTTTAAACAGCATCAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAAtata                                  <  2:875660/128‑1 (MQ=255)
                                                                                                 tttATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATaa                                 <  2:1220413/128‑1 (MQ=255)
                                                                                                     taAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGAt                             >  2:2799088/1‑128 (MQ=255)
                                                                                                        aaaTACAAATTTTAAACAGCAAAAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTa                          <  2:1714142/128‑1 (MQ=255)
                                                                                                          aTACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATATATTTAATATGATATACCTATTTTAGTTGATTAAAATGAAAAACGAGTTTTAATATAAATATTTaaa                        >  2:3432877/1‑128 (MQ=255)
                                                                                                          aTACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaaa                        <  1:4507610/128‑1 (MQ=255)
                                                                                                          aTAAAAATTTTAATCATCAACAA‑‑‑TATTA‑TTATTATTTTTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaaa                        <  2:1948748/128‑1 (MQ=255)
                                                                                                            aCAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAaac                      >  1:1580284/1‑128 (MQ=255)
                                                                                                            aCAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAaac                      >  1:4639058/1‑128 (MQ=255)
                                                                                                             cAAATTTTAAACAGCAACAATATTATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaaa                        <  2:1593111/128‑1 (MQ=255)
                                                                                                                  tttAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAg                <  1:6608140/128‑1 (MQ=255)
                                                                                                                   ttAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACTAGTTTTAATATAAAGATTTAAAACAACAAGc               >  1:169572/1‑128 (MQ=255)
                                                                                                                    tAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAATCt              >  1:4042734/1‑128 (MQ=255)
                                                                                                                    tAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCt              >  2:6517059/1‑128 (MQ=255)
                                                                                                                    tAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAAAGAGTTTTAATATAAAGATTTAAAACAACAAGCt              >  1:2069830/1‑128 (MQ=255)
                                                                                                                          gCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACt        >  2:621987/1‑128 (MQ=255)
                                                                                                                            aacaa‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTCAATATAAAGATTTAAAACAACAAGCTGAAACtat      >  1:5232358/1‑128 (MQ=255)
                                                                                                                            aacaa‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGCTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat      >  1:2566633/1‑128 (MQ=255)
                                                                                                                              caa‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat      >  1:3813592/1‑126 (MQ=255)
                                                                                                                               aa‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAtt   <  2:1320717/128‑1 (MQ=255)
                                                                                                                               aa‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAtt   >  1:5117266/1‑128 (MQ=255)
                                                                                                                               aa‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAtt   <  1:5335726/128‑1 (MQ=255)
                                                                                                                               aa‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAtt   >  2:4659526/1‑128 (MQ=255)
                                                                                                                               aa‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACATATTTTAGTTGATTAAAATGaa                                                   >  1:4157797/1‑80 (MQ=255)
                                                                                                                                a‑‑‑tatTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAttt  >  1:2282862/1‑128 (MQ=255)
                                                                                                                                |                                                                                                                                   
AAAGGAAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTA‑TTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTT  >  CP016816/117814‑118069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.