| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 437880 | 406 (0.110) | 1478 (0.320) +ATAT |
183/188 | 1.7 | 74.9% | intergenic (‑184/+238) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | 437881 = | 502 (0.100) | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
Only 100 of 2318 total aligned reads displayed.
TGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437753‑438007 | gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Ga > 1:10013190‑M1/1‑127 (MQ=255) gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATGTTTAAAAT‑AAATATTTTAGGAAATGAATCAAAGAAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Ga > 2:2291187‑M1/1‑127 (MQ=255) aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gat > 1:6691729‑M1/1‑126 (MQ=255) aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gat > 2:2628037‑M1/1‑126 (MQ=255) aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gat > 2:3433311‑M1/1‑126 (MQ=255) aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gat < 2:9786571‑M1/128‑3 (MQ=255) ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatat > 1:472250‑M1/1‑122 (MQ=255) ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAG‑TTA‑‑AT‑‑Gatatat > 2:8622994‑M1/1‑122 (MQ=255) aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatat > 1:150470‑M1/1‑120 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Tatatatata > 2:960496‑M1/1‑119 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACATCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatata > 2:1520153‑M1/1‑119 (MQ=255) tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatata > 1:7739935‑M1/1‑115 (MQ=255) tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatata < 2:8023999‑M1/128‑14 (MQ=255) tGTAGTT‑TAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAAAATCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatat > 2:6477813‑M1/1‑114 (MQ=255) aaaaataagttTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatat > 1:8390130‑M1/6‑112 (MQ=255) aGTTTTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatat < 1:759751‑M1/128‑17 (MQ=255) aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatat > 1:2761122‑M1/1‑112 (MQ=255) aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatat > 1:6888203‑M1/1‑112 (MQ=255) ttaATTTTCATTTTTAATAAATATTAGATATAAAAAATTTATTTTTAAAAT‑AAATATTATATGAAATTAATCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑TT‑‑Tatatatatatatatatatat < 2:6004607‑M1/127‑21 (MQ=255) tAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatcatta < 2:1346539‑M1/128‑22 (MQ=255) aaGTTTCATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGTAAATTAATAAAAGCAAAAAACTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatat < 2:5777307‑M1/128‑23 (MQ=255) gTTTCATTTTTAATAAATATAAGATATAAATATTTTATTTTTAAAAT‑AAATATTTTATGTAATGAATAAAAGAAAAAAAATCAATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatat < 2:7852853‑M1/128‑25 (MQ=255) tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTATTAAATGAAGCAAATCAAAAAACTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatgtatatatatatatatatatata < 1:9918721‑M1/128‑26 (MQ=255) tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAACGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatata > 2:3885880‑M1/1‑103 (MQ=255) tttaTTTTTTATATATATTAGATATATAATTTTTATTTTTATAAT‑AAATATTTTTTGAAATTAATAAAAGATAAAAACTCCATATTAAATATAGAG‑TTA‑‑TT‑‑T‑‑‑‑‑‑atatatatatatatatatatatatat < 1:1286914/125‑1 (MQ=255) ttCATTTTTAATAAATATTAGATATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCACAGCAAAAACCTCCATATTAACTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatat < 1:8147646‑M1/128‑27 (MQ=255) tCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatata < 1:1022230‑M1/128‑28 (MQ=255) tttttttATAAATATTATAAATAAAAATTTTATTTTTAAAAT‑ATATATTTTATTATATGAATAAAATAAAAAAAATCTATATTACATATATAG‑TTA‑‑TT‑‑T‑‑‑‑‑‑atatatatatatatatatatatatatata < 1:6480575/127‑2 (MQ=255) aTTTTTTATAAATATTAGAAATAAATATTTTATTTTTTATAT‑ATATATTTTAGTTTTTGTTGATCATAAATATCATCAATATATCTTATAGAT‑ATA‑‑TT‑‑T‑‑‑‑‑‑atatatatatatatatatatatatttata < 1:5802578/128‑2 (MQ=255) aTTTTTAATATATATAATAAATAAAAATTGTATTTTTATATT‑AAATATTTTATTAAATGAATCAAATAAAAAAAATCAATATAAAATATATAG‑TTA‑‑AA‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatata < 2:2109374/128‑2 (MQ=255) aTTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAAT‑AAATATTTTAGTATATGAATCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatata < 1:4538445‑M1/128‑30 (MQ=255) tttttAATATATATTAGAAATAAAAATTGTATTTATAAAAT‑AAATATTTTAGTAAATGAATCTAAGAAAAAAAATAAATATTACCTATAGAG‑TTA‑‑TT‑‑Tatatatatatatatatatatatatatatat < 1:7235852‑M1/128‑31 (MQ=255) tttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatat > 1:9682126‑M1/1‑98 (MQ=255) ttttAATAAATATTATATATAAAAATTTTTTTTTTAAAAT‑AAATATATTTTTAAATGTATCAAAGAAAAAACCTCAATATTACATATATAG‑ATA‑‑AT‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatata < 1:4118198/128‑4 (MQ=255) tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatataaatataaaa > 1:7391355‑M1/1‑96 (MQ=255) tttAATAAATATTAGAAATAAAAATAGTATTTTTAAAAT‑AAATATTTTATTAAAACAAGCAAACCAAAAACCTCCATATTACCTATAGAG‑ATA‑‑AT‑‑Gatatatatatatatatatatatatatatatat < 2:7313617‑M1/128‑33 (MQ=255) ttAATAAATATTAGAAATAAAAATAGTATTTTTAAAAT‑AAATATTTTATGAAATTAATAAAATAAAAAACATCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatg < 2:7506787‑M1/128‑34 (MQ=255) taataaATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatga > 1:2397604‑M1/1‑94 (MQ=255) taataaATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatat > 1:1118899‑M1/1‑94 (MQ=255) aatatataTTATAAAAAAAAATTTTATATTTAAAAT‑ATATATTTTATTAAATTAATAAAATAAAAAAACAAAATATTACATATAGAG‑ATA‑‑AT‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatatatgca < 2:4292421/128‑8 (MQ=255) taaataTTATAAATAAAAAAATTATTTTTAAAAT‑AAATATATTATGAATTTAATAAAATAAAAAAACTCCATATTAACTATAGAG‑TTA‑‑AT‑‑T‑‑‑‑‑‑atatatatatatatatatatatatatatatatgcaag < 2:6963788/128‑10 (MQ=255) aataTTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatgcaagcgat > 1:6295424‑M1/1‑89 (MQ=255) aataTTAGAAATAAAAAATGTATTTTTAAAAT‑AAATATTTTATTAAATGAAGAAAATCAAAAAACTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatatgcaag < 2:6302098‑M1/128‑40 (MQ=255) atatTAGAAATAAAAATAGTATATTTAAAAT‑AAATATTTTATGAAATGAAGAAAAGCAAAAACCTCCATATTACCTATAGAG‑ATA‑‑AT‑‑Tatatatatatatatatatatatatatatatatatcattaa < 2:10259799‑M1/128‑41 (MQ=255) tatTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgcacgcgct > 2:6619551‑M1/1‑87 (MQ=255) tatTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatataataaatatct > 1:9349883‑M1/1‑87 (MQ=255) atTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTATTAAATGTATCAAAGCAAAAACCTCCATATTATCTATAGAG‑TTA‑‑TT‑‑Tatatatatatatatatatatatatatatatatgcaagcgatc < 1:9167223‑M1/128‑43 (MQ=255) atTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATAAAAGCGATctgaa > 2:9336677/1‑124 (MQ=255) atTAGAAATAAAAATTGTATTTTTAAAAC‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatataaaaaagctaac > 1:2942640‑M1/1‑86 (MQ=255) ttAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatattcaagatat > 1:3976264‑M1/1‑85 (MQ=255) ttAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Tatatatatatatatatataaatatatatatataagaaatatat > 1:6134265‑M1/1‑85 (MQ=255) aGATATAAAAATTTTATTTTTAAAAT‑AAATATTTTATGAAATGAATCAAATAAAAAACCTCAATATTAACTATAGAG‑ATA‑‑AT‑‑Tatatatatatatatatatatatatatatatatgcaagcgatcagc < 2:901906‑M1/128‑46 (MQ=255) aGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgaaagcgatcagc > 2:7135495‑M1/1‑83 (MQ=255) aGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCTATCAGCATat > 2:5262374/1‑127 (MQ=255) gAAATAAAAATTTTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGAAAAAAACTCCATATTACCTATAGAG‑TTT‑‑AT‑‑Tatatatatatatatatatatatatatatatatgcaagcgatcagca < 2:4466651‑M1/128‑47 (MQ=255) aaaatatgtatttTTAAAAT‑AAATATTTTAGATAATCAAGCAAAACAAAAACCACCATATAAACTATATAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgcaagcgatcagcataaaa < 1:3328286‑M1/122‑52 (MQ=255) aaaTTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATGCAATCGATCAGCATAAAATGGTGAAATTTAGa > 1:8557487/1‑128 (MQ=255) aaTAGTATTTTTAAAATAAAATATTTT‑TGAAATTAATCAAAACAAAAAAAACTATATAAACTATATAGATTATTATA‑T‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATgg < 1:4958440/128‑1 (MQ=255) ttctATTTATAAAAT‑AAATATATTATTAAATCAATCAAATAAAAAACATCCAAAATAAATATAGAG‑ATA‑‑AT‑‑G‑‑‑‑‑‑ATATATATATATATAAATATATATATATGCAAGAGATCAGCATAAAATGGTGAAAt < 2:1691422/125‑1 (MQ=255) ttGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgcaagcgatcagcataaaattgtg > 1:7960527‑M1/1‑72 (MQ=255) tGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatataaaatctatcagaaaaaaaaagcaa > 1:5341532‑M1/1‑71 (MQ=255) ttttttttAAAAT‑AAATATTTTATTAAATTATGAAAATAAAAAAAATATATATAAAATATATAG‑TTA‑‑ATTAT‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt < 1:3740777/125‑1 (MQ=255) tATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatattctcgctatcatcataaaattgttaaa > 2:2456149‑M1/1‑69 (MQ=255) tATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtta > 2:3756713‑M1/1‑69 (MQ=255) atttcctaaaat‑aTTTATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatattaaagcgataagcataaaatattga > 1:350244‑M1/7‑69 (MQ=255) aTTTTTAAAAT‑AAATATTTTATGAAAAGAAGCAAATCAAATAAATCCATATTACCTATAGAG‑ATA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaat < 2:3265657‑M1/128‑61 (MQ=255) tttttAAAAT‑AAATATTTTAGTAAATGAAGAAAAGAAAAAAAATCCATATTAAATATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaattta < 2:882936‑M1/128‑62 (MQ=255) ttAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgaaatcgataagcataatattgtgaaatatag > 2:1129860‑M1/1‑64 (MQ=255) ttAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatagataaaagcgaacagcataaaattctcaaattt > 2:6169710‑M1/1‑64 (MQ=255) at‑aaataTTTTATTAAATTAAGAAAATAAAAAAACTCCATATTAAATATAGAG‑ATA‑‑AT‑‑GATATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATc < 2:3601666/128‑1 (MQ=255) at‑aaataTATTAGGAAATGAATCAAAGAAAAAACCTCCATATTACATATAGAG‑TTA‑‑TT‑‑Gatatatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaatttagatc < 2:1941500‑M1/128‑70 (MQ=255) t‑aaataTTTTAGTAAATGAATCAAAGCAAAAACCTCCATATTAACTATAGAG‑TTA‑‑AA‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTg < 2:10402642/128‑1 (MQ=255) aataTTTTAGCTAATTTATCAAATCAAAAACCTCGATATTAACTATAGAG‑TTA‑‑TT‑‑Tatatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaatttagatctgagt < 2:2871023‑M1/128‑73 (MQ=255) tttAGGAAATGAAGCAAAGCAAAAACCTCCAAATTACCTATAGAG‑TTA‑‑AT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa < 1:6016069/128‑1 (MQ=255) ttactaaatgaagCAAACCAAAAAACTACATATTACCTATAGAG‑TTA‑‑AT‑‑atatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaatttagatctgagttggtctta < 1:5153790‑M1/123‑79 (MQ=255) tAGTAAATGAAGAAAATCAAAAAACTCAATATTAACTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaatttagatctgagttggtctt < 2:838314‑M1/128‑80 (MQ=255) aGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgcaagcgatcagcataatatggtgaattatagagctgagttggtctta > 1:1852138‑M1/1‑48 (MQ=255) tattaagcaaataaaaaaACTAAATATTAACTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaatttagatctgagttggtcttaaatt < 1:8959405‑M1/124‑85 (MQ=255) aaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatacaagcgctcaccaaaaaatggagatatttagatctgagtttgtattaaatt > 2:7650832‑M1/1‑44 (MQ=255) tcaaatcaaaaACCTCCATATTTACTATAGAG‑TTA‑‑AT‑‑Tatatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaatttagatctgagttggtcttaaatttgtagt < 2:5097361‑M1/127‑91 (MQ=255) gcaaagcaaaAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATGAAAGAGATAAACAAAAAATATTGATATTTATATCTGAGTTTTTCTATAATTTTTAGatttt > 2:3096169/1‑128 (MQ=255) agcaaaAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatttgcaagcgatcagaataatatggtgaaatttatatctgagttggtgatatatttgtttttttt > 1:5580140‑M1/1‑34 (MQ=255) caaaAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatgcaagcgatcatcataaaattgtgaaatttagatctgatttggtattaaatttttagtttttatat > 1:2536991‑M1/1‑32 (MQ=255) aaaaCATCTATATTAAATATAGAT‑TTA‑‑AT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGtt < 1:10385810/128‑1 (MQ=255) aaactatatattatatttagag‑ttA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgctagcgatcagcataaaatggtgaaatttagatctgagttggtcttaaatttgtagtttttatttat < 2:4063316‑M1/121‑101 (MQ=255) aCCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatatgcaagctatcatcataaaattgtgaaatttagatctgagtttgtctaaaatttttatttattattta > 1:3137026‑M1/1‑27 (MQ=255) aCCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATTCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGatt > 1:8741110/1‑128 (MQ=255) ccTCCATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgcaagctatcagcataaaattgtgaaatttatatctgagtttctcttatatttatagtttttatatatag > 2:9179170‑M1/1‑26 (MQ=255) tCCATATTACCTATAGAG‑TTA‑‑AT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTATATTTGTAGTTTTTATTTATAGTTTATAAAGt > 2:4868374/1‑128 (MQ=255) cATATTACCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaatatagatctgagatgctcttaaagttgtagtttttatttttagttta > 1:4358886‑M1/1‑22 (MQ=255) atatTACCTATAGAG‑TTA‑‑AT‑‑GAT‑‑‑‑ATATATATATATATATATATATATATATGCACGCGCTCAGCATAAAATGGTGATATTGATATCTGAGTGGCTCTAATATTTATAGTTTTTATTTATAGTTtattc > 2:544123/1‑126 (MQ=255) atatTACCTATAGAG‑TTA‑‑AT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATTCAAGCGATCAGAAAAAAATGGTGATATTTAGATGTGAGTTGGTATTATATTTGTAGTTTTTATTTATATTTtaataat > 1:2023455/1‑123 (MQ=255) tACCTATAGAG‑TTA‑‑AT‑‑GAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATATAATAGTTATATTTATATCTGATTTAGTAATAAATATATATTTTTTATTTATATTAAATAAAGta > 2:6761519/1‑127 (MQ=255) aCCTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatgcaagagatcataataaaattgtgatatttatatctgagtttgtgttaaatatgttgtttttatttatagtttataaagt > 1:2196861‑M1/1‑16 (MQ=255) ccTATAGAG‑TTA‑‑AT‑‑Gatatatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaatttagatctgagttggtcttaaatttgtagtttttatttatagtttatatag > 1:1661867‑M1/1‑15 (MQ=255) agag‑TTA‑‑AT‑‑GAT‑‑‑‑ATATATATATATATATATATATATATATACAAGAGATCATCATAAAATTGAGAAATTTAGATCTTATTTTGTCTAAAATTTTTATTTTTTATATATAGTTTATATAGTtaataaat > 2:10101446/1‑126 (MQ=255) ag‑TTA‑‑AT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa < 2:8200048/128‑1 (MQ=255) ttA‑‑AT‑‑Gatatatatatatatatatatatatatatataagaaagcgatcagcataaaatggtgaaatttagatctgagttggtcttaaatttgtagtttttatttatagtttataaaggtaataattta < 2:5591457‑M1/128‑123 (MQ=255) t‑‑Gatatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaatttagatctgagttggtcttaaatttgtagtttttatttatagtttataaagttaataatttagatt > 2:4683239‑M1/1‑2 (MQ=255) gatatatatatatatatatatatatatatatatgcaagcgatcagcataaaatggtgaaatttagatctgagttggtcttaaatttgtagtttttatttatagtttataaagttaataatttagattt < 1:7054827‑M1/128‑128 (MQ=255) | TGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAAT‑AAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑TTA‑‑AT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437753‑438007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |