BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	165253 =	545 (0.600)	107 (0.140)	47/218	35.8	18.5%	intergenic (+217/‑325)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
*	?	CP016816	= 165249	466 (0.590)	107 (0.140)	47/218	35.8	18.5%	intergenic (+213/‑329)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 617 total aligned reads displayed.

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAGAAA‑GGAAAAAATAT‑TGTTAAAA‑GTAATACTAAAATTATTTAATGTTAATTAA  >  CP016816/165122‑165374

gATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑Gc                                                                                                                                      >  1:523598/1‑128 (MQ=255)

gATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑Gc                                                                                                                                      >  1:1400069/1‑128 (MQ=255)

   aataTTTAGTTTCATGAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑ttt                                                                                                                                  >  2:1828312/1‑128 (MQ=255)

   aataTATAGTTTCATTAATTTATCGCACTTTTATGAATTAGTATGAAACTAAAACTATTATCTTTATAGATATTTTTTTTATATGCAAATTTTTAAAAAATTAAATATAACTTGAAAAAAA‑TA‑AC‑ttt                                                                                                                                  >  1:406186/1‑128 (MQ=255)

     tatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑ttttt                                                                                                                                >  2:233750/1‑128 (MQ=255)

           gTTTCATTTATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAAATTGTAAAAAA‑AA‑GC‑tattttttaca                                                                                                                          <  2:69909/128‑4 (MQ=255)

            tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑tttttttttttt                                                                                                                         >  1:1905646/1‑128 (MQ=255)

              tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑tttttttttttttt                                                                                                                       >  2:972819/1‑128 (MQ=255)

               cATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑ttttttttttttttt                                                                                                                      >  2:17397/1‑128 (MQ=255)

                   aaTTTTTCGCACTTGTATGAATTATTAATAAACTAAAACTATTATCTTTTTATATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑gttttttttttttttttta                                                                                                                  <  2:679550/128‑2 (MQ=255)

                     tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑ttttttttttttttttttaaa                                                                                                                >  2:157568/1‑125 (MQ=255)

                     tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑tttttttttttttttttaaaa                                                                                                                >  2:244927/1‑124 (MQ=255)

                      ttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTtataat                                                                                                               >  2:1530258/1‑126 (MQ=255)

                        atccgaCTTGTATTCAATAGTAACCAAATAAAACAATTTTCTTTTTATATATTTTTTGTATATGCAAATTTTTAAAAAAATAAATTGAAATTTTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTATAATg                                                                                                            <  1:1874698/123‑1 (MQ=255)

                          cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTATAAttta                                                                                                          >  1:478287/1‑125 (MQ=255)

                            cACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑ttttttttttttttttttatatgtaaat                                                                                                         >  1:1757899/1‑118 (MQ=255)

                              cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTtataatttaaataa                                                                                                       >  1:1259894/1‑118 (MQ=255)

                              cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑ttttttttttttttttttttttttatttaa                                                                                                       >  1:1671730/1‑117 (MQ=255)

                              cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTtataatttaaatat                                                                                                       >  2:531489/1‑118 (MQ=255)

                               ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑ttttttttttttttttttttaaaataaaaaa                                                                                                      >  2:661414/1‑116 (MQ=255)

                               ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTTTA‑AATTTAAat‑at                                                                                                    >  2:640181/1‑128 (MQ=255)

                               ttGTATGAATTAGTAAGAAAATAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATAAATTTGAAATTGTAAAAAA‑TA‑GC‑‑‑TTTATTTTTCTTTTTTTATAATGTAAAt‑ata                                                                                                   >  2:300459/1‑128 (MQ=255)

                                tttatttaatattAACAAAATTAAAATATTATTTTTTTTTTAATTTTTTTTTTATTTAAATTTTTAAAAAATTAAATTTAAATTGTTAAAAA‑TA‑G‑‑GTTTTTTTTTTTTTTTTTTATAATGGAAAt‑ata                                                                                                   <  2:1002323/116‑1 (MQ=255)

                                   aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TATATTTTTTTTTTATTATTTAAttaaataaaaaa                                                                                                  >  1:425941/1‑117 (MQ=255)

                                      aaTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATGAAATT‑AAAATttttt                                                                                            >  1:357171/1‑127 (MQ=255)

                                        ttAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTATAAAAAA‑TA‑TC‑TTTTTTTTTTTTTTTTTAAAAAAT‑TAAAT‑AAAAATTTTat                                                                                           >  2:1209822/1‑127 (MQ=255)

                                          aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTattta                                                                                        >  2:1854861/1‑124 (MQ=255)

                                           ttAAGAAAATAATAATATTTTTTTTTTAGATATTTTTTGTTATTTCAAATTTTTAAAAAATTAATTTTAACATGTTAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTAt                                                                                       <  2:119189/127‑1 (MQ=255)

                                           gTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTT‑‑TAATTTAAAT‑ATAAATTTTattttt                                                                                       >  1:1003842/1‑123 (MQ=255)

                                            taataaaaaaaaactaATATCTTTTTTTATATTTTTTTTTTAATAAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAA‑TA‑TC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTAt                                                                                       <  2:1136104/119‑1 (MQ=255)

                                            taataaAATAAAAATATTTATTTTTTATATTTTTTTTTTTTTATCTAATTTTTTAAAAATTAATTTTTACTTGTAAAAAA‑TATTT‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGt                                                                                         <  1:1115992/128‑1 (MQ=255)

                                            tAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGTTAttt                                                                                     >  1:1201466/1‑128 (MQ=255)

                                              ataaaatataactaTTATCTTTTATTATATTTTTTTTATTTGCAAATTTTTAAAAAATTAATTTTTAATTTTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTAtttt                                                                                    <  2:429552/126‑1 (MQ=255)

                                               ttaaataaaaataTTATATTTTTATATATTTTTTTTATATTCAAATTTTTTAAAAAATAATTTTAAATTTTAAAAAA‑TA‑‑‑‑TGTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTttg                                                                                   <  1:684078/123‑1 (MQ=255)

                                                aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTAAAATTAAAAT‑AAAAATATTaataattttt                                                                                   >  2:1406378/1‑119 (MQ=255)

                                                  actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GCTTTTTTTTTTTTTTTTTTTTATAATGAAAAT‑TAAAATTTTaataattttt                                                                                   >  1:1729348/1‑119 (MQ=255)

                                                  actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTAAAATTTAAAT‑AAAAATTTTATTTATtttttt                                                                                 >  2:471640/1‑128 (MQ=255)

                                                   ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTAGTTATttttttt                                                                                >  1:124526/1‑127 (MQ=255)

                                                    ttaaaataATATTTTTTTTTATTTTTTTTTTATATTCAAATTTTTAAAAAATTAATTTTTAATTTTAAAAAA‑TA‑TC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTtgttgt                                                                               <  2:1555300/126‑1 (MQ=255)

                                                         ctaTTTTTTTTTTATATATTTTTTTTAAATTCAAATTATTAAAAAATTTATTTTTAATTTTTAAAAT‑TA‑TC‑‑TTTTTTTTTTTTTTTTTTATAATTGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAg                                                                         <  2:1039366/128‑1 (MQ=255)

                                                         ctaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATTGAAAT‑ATAAATTTTATTTAATTTGTTTTAT‑aatt                                                                        >  2:925561/1‑126 (MQ=255)

                                                         atattatTTTTTTATATTTTTTTTGTATATTCAAATTTTTAAAAAATTAATTTGAAATTGTAAAAAA‑T‑‑‑T‑TCTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGt                                                                        <  1:1708625/127‑1 (MQ=255)

                                                         atattatCTTTTTTTATATTTTTTTTATATTCAAATTTTTAAAAAATAAATTTTAACTTGTAAAAAA‑AA‑GC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAg                                                                         <  2:1644683/127‑1 (MQ=255)

                                                          tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTTGTTATTTTTTTTTAT‑AATTa                                                                       >  2:192486/1‑128 (MQ=255)

                                                           ttttattttttATTTTTTTTTTTTTTATTTAAATTTTTTATAAATTTATTTGAAATTGTAAAAAA‑TA‑‑T‑ATTTTTTTTTTTTTTTTTTATAATTGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTa                                                                       <  2:1355365/122‑1 (MQ=255)

                                                            ttttatttttATAATTTTTTTTTATATTCAAATTTTTAAAAAATTAAATATAAATTTTAAAATA‑TA‑‑‑‑TCTTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTAGGTATTTTGTTGTAT‑AAGTAT‑c                                                                    <  2:1964475/123‑1 (MQ=255)

                                                            ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATTGAAAT‑ATAAATTTTATGTATTTTTTTTTAT‑AATTAta                                                                     >  2:1106959/1‑127 (MQ=255)

                                                            ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTAATTTATTTTGTTTTAT‑AATTAta                                                                     >  1:284721/1‑127 (MQ=255)

                                                             tatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTTTTTAATTAAAAT‑ATAAATTTTATTTATttttttttaaaattat                                                                       >  2:1462576/1‑118 (MQ=255)

                                                             tatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTATTTTTT‑TATTGGAAAT‑ATAAATTTTAGGTTTTTTTATGTAT‑AATTaat                                                                     >  1:1528934/1‑126 (MQ=255)

                                                                   tttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTATTTATTTTTTTTACT‑AATTAT‑ATaaaaaa                                                             >  1:1158483/1‑128 (MQ=255)

                                                                     tAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTAAAATTTAAAA‑ATAAATTTTATGTATTTTATTTTAT‑AATTAT‑ATAAAAAAAt                                                           >  2:27327/1‑128 (MQ=255)

                                                                       tttatTTTTTTTTTATTTAAATTTTTAAAAAAATAATTTTAATTTTTAAAAAA‑AA‑‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAg                                                         <  1:906199/126‑1 (MQ=255)

                                                                       tttatTTTTTTTATATTAAAATTTTTAAATAAATTATTTTAATTTTTAAAAAATTT‑TT‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTaaaaaaa                                                            <  2:486474/126‑1 (MQ=255)

                                                                       gttatTTTTTTTATATGTAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAA‑TA‑‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAg                                                         <  2:1887303/126‑1 (MQ=255)

                                                                        ttatTTTTTTTTTATGTAAATTTTTAAAAATTTTATTTTTAATTGTAAAAAA‑‑A‑TT‑GTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAg                                                         <  1:1561626/127‑1 (MQ=255)

                                                                        atatTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTT‑‑TAATGTAAAT‑ATAAATTTTAGTTTTTTTTTTTTAA‑AATTAT‑ATAAAAAAATaaa                                                        >  2:1069624/1‑126 (MQ=255)

                                                                          atTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTATTTTTTTTTTTTTAT‑AATTAT‑Aaaaaaaaaaaaaa                                                       >  1:1605013/1‑123 (MQ=255)

                                                                          atTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTATATAATGGAAAT‑ATAAATTTTAGGTATTTTTTTTTCT‑AAGTTT‑CCAAAAAAATAGaa                                                       >  2:1762687/1‑128 (MQ=255)

                                                                            tttttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTTTATATTGTAAAT‑ATAATTTTTATTTTTTTTTTTTATT‑AATTAA‑AAAAAAAAATATaaa                                                      >  1:1929747/1‑128 (MQ=255)

                                                                              tttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTATATTGTAAAT‑ATAAATTTAAGTTATTTTTTTTTAT‑AATTTT‑AAAAAAAAATAAAAA‑gta                                                  >  1:1327794/1‑126 (MQ=255)

                                                                               ttGTATATTCAAATTTTTAAAAAATTAATTTTTAATTGTAAAAAA‑TA‑TC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAGAAA‑GGaa                                                 <  2:1623279/128‑1 (MQ=255)

                                                                                tGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTATTTATTTTGTTTTAT‑AATTAT‑ATAAAAAAATATAAA‑GTaaa                                                >  2:1483369/1‑128 (MQ=255)

                                                                                  tataTTCAAATTTTTAAAAAAATAATTTTAAATTTTAAAAAA‑TT‑TC‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAGAAA‑GGaaaa                                               <  2:1594738/128‑1 (MQ=255)

                                                                                    tttttaaaTTTTTAAAAAATTAATTTTAAATT‑TTTAAAA‑TT‑TT‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAAAAA‑GGAAAAAat                                            <  1:98310/123‑1 (MQ=255)

                                                                                    tatGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTAAAATGTAAAT‑ATAATTTTTAGTTTTTTTTTTTTTT‑AATTTT‑GTAAAATAATATAAA‑Gaaaaaatt                                            >  2:341128/1‑126 (MQ=255)

                                                                                      tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTAAAATTTAAAT‑ATAAATTTTATTTATTTTGTTTTAT‑AATTTT‑ATAAAAAAATATAAA‑TAAAAAAatat                                          >  2:591051/1‑128 (MQ=255)

                                                                                      tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTAAATTTTAAAT‑AAAAAATTTATTAATTTTTTTTTGT‑AAGTAT‑ATAAAAAAAT‑TAAA‑ATAAAAAataatt                                        >  2:573490/1‑125 (MQ=255)

                                                                                        cAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTTTTTAATGTAAAA‑ATAAATTTTTTTTATTTTTTTTTAA‑AATTAT‑AAAAAAAAATa‑aaa‑ataaaaaataatt                                        >  1:758164/1‑125 (MQ=255)

                                                                                         aaaTTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAATTTTTAGTTATTTTTTTGTAT‑ATTTAT‑ATAAAAAAATAAAAA‑GTAAAAAAAAt‑ttta                                     >  2:390164/1‑125 (MQ=255)

                                                                                           aTTTTTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑‑‑TTTTTTTTTTTTTTTTATAATTGAAAT‑ATAATTTTTAGTAATTTTTTTTTCA‑AAGTAA‑ATAAAAAAATAAAAA‑TTAAAAAATAT‑T‑TTaaaa                                 >  1:1060429/1‑128 (MQ=255)

                                                                                            ttttTAAAAAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTTTAT‑‑TGGAAAT‑ATAAATTTTAGTTATTTTTTTGTAT‑AAGTAT‑ATAAAAAAATTTAAT‑GTAAAAAATAT‑TTTTaaa                                  >  2:51569/1‑128 (MQ=255)

                                                                                               ttaaaaaaTTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTATTTTTTTTTTTGTAT‑AATTAT‑ATAAAAAAAAAAAAA‑GAAAAAAATAT‑TTTAaaaa                                 >  1:567035/3‑128 (MQ=255)

                                                                                                ttaaaaatttattTGAATTTTTTAAAAA‑TT‑G‑‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAGAAA‑GGAAAAAATAT‑TGTTAAAA‑GTa                             <  1:244927/123‑1 (MQ=255)

                                                                                                taaaatatttatttTAATTTTTTAAAAA‑TT‑TC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAGAAA‑GGAAAAAATAT‑TGTTAAAA‑Gt                              <  2:751945/122‑1 (MQ=255)

                                                                                                 aaaaaaTTAATTTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑AAAAATTTTATTTATTTTTTTTTAT‑AATTAT‑ATAAAAAAAAATAAA‑ATAAAAAATAT‑TTTTaaattaa                              >  2:1424343/1‑124 (MQ=255)

                                                                                                    aaattaattTTAATTTTTAAAAAA‑‑A‑TC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAGAAA‑GGAAAAAATAT‑TGTTAAAA‑GTAATAc                         <  2:1710132/127‑1 (MQ=255)

                                                                                                     aattaattTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAATTTTTAGGTTTTTTTTTGTAT‑AATTTT‑AAAAAAAAATAAAAA‑GTAAAAAATAT‑TTTTAAAA‑TTaaaaat                        >  1:1353129/1‑124 (MQ=255)

                                                                                                     aattaattTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTAGGTATTTTGTTGACT‑AATTAT‑CAAAAAAAATAAAAA‑GTAAAAAATAT‑TTTTATAA‑TTAATACt                        >  1:1492295/1‑128 (MQ=255)

                                                                                                     aattaattTGAACTTGTAAAAAA‑TA‑GC‑‑‑‑TTTTTTTTTTTTTTTTATATTGTAAAT‑TTAAATTTTAGGTATTTTTTTTTAT‑ATATAA‑ATAAAAAAAAAAAAA‑GTAAAAAA‑AT‑TTTTAAAA‑TTaaaaaata                      >  1:1299401/1‑122 (MQ=255)

                                                                                                     aattaattTGAACTTGTAAAAAA‑TA‑GC‑‑‑‑TTTTTTTTTTTTTTTTATAATTGTAAT‑TTAAATTTTTTGTATTTTTTTTTAT‑AATTTTAATAAAAAAAT‑TAAA‑TGAAAAAATAT‑TTTTTAAA‑TTtataaat                       >  2:85331/1‑125 (MQ=255)

                                                                                                      attaattTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGTTATTTTTTTGTAT‑AAGTTT‑AAAAAAAAATAAAAA‑GGAAAAAATAT‑TTTTAAAT‑TTAATaat                        >  1:877946/1‑126 (MQ=255)

                                                                                                      attaattTGAACTTGTAAAAAA‑TA‑GC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTTTGTTTTTTTTTTTAT‑AA‑TTT‑AAAAAAAAATATAAATGTAAAAAATAT‑T‑TTAAAA‑GTTAttaaaaa                     >  1:1778099/1‑122 (MQ=255)

                                                                                                        taattTGAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTATATTGTAATT‑TTAAATTTTAGTTTTTTTTTTGGGT‑ATTAAA‑AAAAAAAAATAAAAA‑GAAAAAAATTT‑TTTTAAAT‑TTAATaaaaa                      >  1:1636016/1‑124 (MQ=255)

                                                                                                        taattTGAACTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTAAAATTTAAAT‑ATAAATTTTAGTTATTGTGTTGAAT‑AAGTAT‑CTAAAAAAAATAAAA‑GGAACAAATAT‑TTTTAACT‑GAAAGACTaaa                     >  2:1254017/1‑128 (MQ=255)

                                                                                                        taattTGAACTTGTAAAAAA‑TA‑GC‑‑‑‑TTTTTTTTTTTTTTTTAAAATGGTAATAAAAAATTTTAGG‑ATTTTTTTTTATAAATTTT‑AAAAAAAAATAAAAA‑GAAAAAAAATT‑TATTaaaataaaaaaaaaa                      >  1:103292/1‑117 (MQ=255)

                                                                                                         aattTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTTTTTAAATTAAAA‑ATAAATTTTAAATATTTTTTTGAAG‑TATTAT‑TCAAAAAAATATAAA‑ATAAAAAAAATATTTTAAAATGTAATaat                        >  2:1314026/1‑126 (MQ=255)

                                                                                                            tttttattttataaaa‑TA‑TT‑TTTTTTTTTTTTTTTTTTTATAATTGAAAT‑ATAAATTTTAGTTATTTTGTTGTCT‑AAGTAT‑ATAAAAAAATAGAAA‑GGAAAAAATAT‑TGTTAAAA‑GTAATACTAAAat                   <  2:897426/116‑1 (MQ=255)

                                                                                                             tGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTTT‑TAATGAAATT‑AAAAATTTTTTGTTTTTTTTTTAAA‑AATTAT‑ATAAAAAAA‑AAAAA‑AAAAAAAAAAT‑TTTTAAAA‑ATAAAAAAAAAattat                >  1:617734/1‑128 (MQ=255)

                                                                                                              gAACTTGTAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTATGTATTTTTTTGTCT‑AATTAT‑ATAAAAAAATATAAA‑TGAAAAAATTT‑TTTTAAAT‑TTAATTATAAAattta                >  2:1680100/1‑126 (MQ=255)

                                                                                                                aattGTAAAAAA‑TT‑G‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAGAAA‑GGAAAAAATAT‑TGTTAAAA‑GTAATACTAAAATTAttt              <  1:1819285/126‑1 (MQ=255)

                                                                                                                aCTTGTAAAAAA‑TA‑GC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTTTTTATTTTTTTTTAT‑AATTAT‑ATAAAAAAATAAAAA‑TTAAAAAATAT‑TTTTAAAA‑TTAATAATAAAATTATTTa             >  2:1909970/1‑128 (MQ=255)

                                                                                                                    tttaaaaa‑TA‑TC‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAGAAA‑GGAAAAAATAT‑TGTTAAAA‑GTAATACTAAAATTATTTAAt           <  1:196806/125‑1 (MQ=255)

                                                                                                                     tAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTTTAAAATTGAAAT‑ATAAATTTTTGGTTTTTTTTTGTAT‑AATTAT‑CAAAAAAAATATAAA‑GTAAAAAATAT‑TTTTAAAA‑GTAAAAAAAAAtttatttatag          >  1:446859/1‑125 (MQ=255)

                                                                                                                     tAAAAAA‑TA‑GC‑‑TTTTTTTTTTTTTATTTAAAAAAGAAAAT‑ATAAATTTTTTTTTTTTTTTTTTAT‑AAGTTA‑AAAAAAAAAAAAAAA‑AAAAAAAATAT‑TTTTAAAA‑AAAATAAAAAAAATTTTTaaatt         >  1:814973/1‑125 (MQ=255)

                                                                                                                      ataaaa‑TA‑TT‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAGAAA‑GGAAAAAATAT‑TGTTAAAA‑GTAATACTAAAATTATTTAATGt         <  1:230890/126‑1 (MQ=255)

                                                                                                                      aaaaaa‑TA‑GC‑TTTTTTTTTTTTTTTTTTT‑T‑ATTTAAAT‑ATAAATTTTTTTTTTTTTTTTTTTT‑AATTTT‑ATAAAAAAATATAAA‑TTTAAAAATAT‑TTTTTTAA‑TTATTAATAAAATTATTTATTGtta       >  2:1943666/1‑128 (MQ=255)

                                                                                                                         aaa‑TA‑GC‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAAGTATTTTGTTGTAT‑AATTAA‑ATAAAAAAATATAAA‑TGAAAAAATAT‑TTTAATAA‑GTAATAATAAAATTAATTAATTttaa      >  2:1793985/1‑128 (MQ=255)

                                                                                                                         aaa‑TA‑GC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTTGGTTTTTTGTTGTAA‑AATTAT‑ATAAAAAAATATAAA‑TTAAAAATATT‑TGTTATAT‑TTAATAATATAATTATTTAATTttatt     >  2:793743/1‑126 (MQ=255)

                                                                                                                               ggC‑TTTTTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTTGTTATTTTTTTTTAA‑AATTAT‑AAAAAAAAAATAAAA‑GTATAAAAAAT‑TGTTAAAA‑TTAATAATTATATTATTTTATTtaaattaa  >  1:928278/2‑128 (MQ=255)

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAA‑TA‑GC‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCT‑AAGTAT‑CTAAAAAAATAGAAA‑GGAAAAAATAT‑TGTTAAAA‑GTAATACTAAAATTATTTAATGTTAATTAA  >  CP016816/165122‑165374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.