| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | 437881 = | 271 (0.300) | 150 (0.200) | 48/206 | 33.4 | 42.1% | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | = 437886 | 189 (0.250) | intergenic (‑190/+232) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 379 total aligned reads displayed.
TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTT > CP016816/437759‑438013 | aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatat > 1:1839604/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatata > 2:87776/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatata > 1:1553543/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATAATACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatata > 1:1229033/1‑128 (MQ=255) tttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatata > 2:309588/1‑128 (MQ=255) tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatata > 1:990617/1‑128 (MQ=255) tAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatata > 1:419856/1‑128 (MQ=255) aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatat < 1:57519/128‑1 (MQ=255) gTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatata < 1:940573/128‑1 (MQ=255) ttttaatattCATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATAACCTATAGAG‑‑‑‑ATA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatat < 2:778203/120‑1 (MQ=255) ttGTAAGTTTAATTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCCATATTAACTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatat < 1:789418/128‑1 (MQ=255) tGTTAGTTTCATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAATCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatata < 1:1779593/128‑1 (MQ=255) tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatata > 1:361924/1‑128 (MQ=255) ttattatttaTTTTTAATAAATATTATAAATATAAATTTTATTTTTAAAATATATATTTTATTAATTTAATCAAAGAAAAAACATCCATATTTCATATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatat < 1:757176/119‑1 (MQ=255) gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatat > 2:350803/1‑128 (MQ=255) gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatat > 2:731374/1‑128 (MQ=255) tttttttGATTTTTAATAAATATTTTAAATATAAATTTTATTTTTAAAATAAATATTTTTTTAAATGAATCACAGCTAAAAACTCCATATTAAATATATAG‑‑‑‑TTA‑TT‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑atatatatatatatatatata < 1:142118/124‑1 (MQ=255) tAAGTTTTATTTTTAATAAATATTATATATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatata < 1:282909/128‑1 (MQ=255) tAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatata > 2:1056913/1‑128 (MQ=255) tAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGCAAAAACATACATATTAAATATATAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatttaaatatatata > 2:202776/1‑128 (MQ=255) aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatcatta < 2:1766049/128‑6 (MQ=255) ttttCTTTTTTAATATATATTATAAATAAAATTTTTATTTTTAAAATATATATTTTATTATATTAAGAAAAGAAAAAACCTCCATATTAAATATAGAG‑‑‑‑TTT‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatat < 1:251043/127‑1 (MQ=255) ttttAATTTTTAATATATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGATATTAAGAAAACAAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatat < 1:345853/127‑1 (MQ=255) gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGAAAAGCAAAAAACTACATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatat > 2:839310/1‑128 (MQ=255) tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAATCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatata < 2:70604/128‑1 (MQ=255) ttCATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTTGTAAATGAAGCAAAGAAAAAAACTCCATATTACATATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑atatatatatatatatatatatatat < 1:4397/128‑1 (MQ=255) taaTTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATATAAAAACTCCATATTACATATAGAG‑‑‑‑ATA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatatata < 1:1804043/126‑1 (MQ=255) tCATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATATTATTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatatata < 2:1432462/128‑1 (MQ=255) cATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGTAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatatata‑‑‑‑‑‑‑‑t > 2:125574/1‑128 (MQ=255) ttttAAAAAAAATAATAAATAAAAATACTAAATATAAAAAAAATATTTTATTATATTTAGCAAATCTAAAACCTATATATTAACTATATAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatatata‑‑‑‑‑‑‑‑tata < 1:847837/128‑4 (MQ=255) ttAATAAATATTAGAAATATAAATTCTTTTTTTATAATAAATATATTATGAAATTAATCAAATAAAAAACCTCTATATTACCTATAGAG‑‑‑‑TTT‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatatatgcaagcg < 2:277682/128‑8 (MQ=255) taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatatata‑‑‑‑‑‑‑‑tatatgc > 2:1828503/1‑122 (MQ=255) aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAACCCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatatata‑‑‑‑‑‑‑‑tatatatg > 1:226526/1‑121 (MQ=255) ataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATc < 2:664117/128‑1 (MQ=255) taaataTTATAAATAAATATTTTATTTTTTAAATAAATATTTTATTATATGAAGATAATCTAAAAACTCTATATTATCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑atatatatatatatatatatatatata‑‑‑‑‑‑‑‑tatgcaagcg < 1:1708290/128‑10 (MQ=255) taaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑atatatatatatatatatatatatata‑‑‑‑‑‑‑‑tattctagcg > 1:1976986/1‑119 (MQ=255) aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GAAAGAGATCa > 2:440625/1‑128 (MQ=255) aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑ACAAGCGATCa > 2:1697318/1‑128 (MQ=255) aaataataaaTAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGACGCACATCAAAAAACACTATATAACCTATAGAG‑‑‑‑ATA‑AT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATaaa < 1:1284009/121‑1 (MQ=255) tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGc < 2:419856/128‑1 (MQ=255) ataatataTAAAAATTGTATTTTTAAAATATATATTTTATTATATTAATAAAATAAAAAAAATCAATATTTTATATAGAG‑‑‑‑ATA‑ATTA‑‑‑‑‑‑T‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAg < 1:1084846/121‑1 (MQ=255) atTAGAAAAAAAAATTGTATTTTTAAAATAAATATTATAGGAAATCAAGCATAGCAAAAACCTCAATATTACCTATAGAG‑‑‑‑ATA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATa < 2:881761/128‑1 (MQ=255) ttATAAATAAAAAATGTATTTATAAAAAAAATATTTTACCAAATCAACCAAACAAAAAACCTCCAAATTACCAATAGAT‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑ATATATATATATATATAAATATAAATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCACCAt < 1:1457719/128‑1 (MQ=255) ttAGATATAAAAATTGTATATTTAAAATAAATATTTTATTAAATTAATAAAATCTAAAACCTCCATATTATCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCAt < 2:232794/128‑1 (MQ=255) tatataTAAAAATTGTATTTTTAAAATAAATATATTAGGAAATTAACCATAGATAAAACCTCTAAATAATCTATATAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAAt < 2:476007/123‑1 (MQ=255) tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATAT‑T‑TATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGAGAGCAGCATata > 1:1953628/1‑126 (MQ=255) aGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAATCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATaa < 1:636052/128‑1 (MQ=255) tataTAAAAATTTTATTTTTAAAATATATATTTTATGAAATGAATCAAAGCAAAAAACTCCATATTAACTATAGAG‑‑‑‑TTA‑TT‑‑‑‑‑‑‑‑GAT‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATa < 1:1017542/125‑1 (MQ=255) gAAATAAAAATTGTATTTTTAATAAAAATATTTTAGGAAATTAATAAAATAAAAAAACTATATATTATCTATAGAT‑‑‑‑TTA‑ATTA‑‑‑‑‑‑T‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATa < 2:455923/128‑1 (MQ=255) aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATAtg‑‑‑‑‑‑‑‑t‑‑g > 2:82796/1‑106 (MQ=255) aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAAt > 2:1526782/1‑128 (MQ=255) ttGTATTTTTAAAATAAATATTTTAGTAAATTAAGCAAATCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAAt < 2:1202269/128‑1 (MQ=255) gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCTATCAGAATAAAATTGTGaa > 1:88066/1‑128 (MQ=255) aTTTTTATAATATATATTTTATTAAATTAATCAAATAAAAAAAATCCATATAATATATAGAGATATTTATATA‑‑‑‑‑‑‑T‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGaa < 2:601852/128‑1 (MQ=255) aaataaatATTTTAGTAAATTACTCAAATCAAAAACATCAATATTAACTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATc < 2:1839604/128‑1 (MQ=255) aaataaatATTTTAGTAAATGAATCAAAGCAAAAACCTCAATATTAACTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt < 2:1791326/128‑1 (MQ=255) ataaataTTTTAGTAAATTAATAAAATCAAAAAACTCCATATTACATATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt < 2:1675650/128‑1 (MQ=255) atatTTTAGCAAATCAACCAAACAAAAAACCTCCATATTATCTCTAGAG‑‑‑‑TTA‑TT‑‑‑‑‑‑‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt < 2:556253/128‑1 (MQ=255) atTTTAGTAAATTAATCATATCTAAAACCTCCATATTACCTATAGAG‑‑‑‑TTT‑ATTATATATAT‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg < 2:16289/128‑1 (MQ=255) gtaaaTGTATCAAAGCAAAAACCTCAATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa < 2:1341606/126‑1 (MQ=255) aaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑AAAAGCGATCAGAATAAAATGGTGAAATTGATATCTGTGTTTGTCTTAAAtt > 1:917806/1‑128 (MQ=255) aaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GAT‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GAAAGAGATCAGCATAAAATGGTGTAATTTAGATCTGAGTGGGTCTGAAATTTg > 2:1893601/1‑128 (MQ=255) ttattcaaataaaaaaCCTCAATATTAACTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GATATAT‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAtt < 2:933314/117‑1 (MQ=255) tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GAT‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑TCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTGGGTCTTAAATTTGTa > 2:1937565/1‑128 (MQ=255) caagaacataaaaaaCCTCAAAATTAAATATAGAG‑‑‑‑TTA‑TT‑‑‑‑‑‑‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt < 1:1909537/118‑1 (MQ=255) agcaaagcaaAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCACGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTGTTAAATTTGttg > 1:141375/1‑126 (MQ=255) gcaaagcaaaAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTTAGTTGGTATTAAATTTATAGt > 2:1103794/1‑128 (MQ=255) gcaaagcaaaAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GAT‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttt > 2:242138/1‑128 (MQ=255) caaatcaaaAACCTCTATATTACCTATAGAG‑‑‑‑TTA‑TT‑‑‑‑‑‑‑‑GAT‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtttt < 1:1674443/128‑1 (MQ=255) aaagcaaaAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAATATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt > 2:1501862/1‑128 (MQ=255) caaaAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATATATATTT‑‑GAAAGCGATCATCATAAAATGGAGAAATTTAGATCTGAGTTGGTCTTAtatttttatttt > 1:662978/1‑128 (MQ=255) aaaaaaCCTCTATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GAT‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt < 1:1171085/127‑1 (MQ=255) aaaCCTAAATATTACCTATAGAG‑‑‑‑ATA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGttt < 1:731126/128‑1 (MQ=255) aaaCATACATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GAT‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGAGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata < 2:1293352/128‑1 (MQ=255) ccTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GATATATATATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GAAAGAGATCAGCATAAAATTGTTAAATTTATATCTGAGAGTGTCTAATATAtttattttttattt > 2:140311/1‑128 (MQ=255) ccTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑CCACGCGATCACCGAAAAATAGTGAAAAATATATCTCAGTGGGTCTATAATATGTAGATTTTATATATATTTTATAAAgatt > 2:1177632/1‑125 (MQ=255) acTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta < 2:382464/127‑1 (MQ=255) ctacaaatTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat < 2:631489/122‑1 (MQ=255) cTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GAT‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GAAAGCGATCAGCAAATAATGGTGATATTTATATCTGAGTTTGTCTTATATTTGTAGTTTTTATTTATAGttt > 2:1451357/1‑128 (MQ=255) ccATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GATAGAGAGAAGAATAAAATGGTTAAATTTAGATCTGAGTTGGTCTTTAATTTTTATTTTTTATTTATAGttt > 1:1189242/1‑128 (MQ=255) ccATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GAT‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑TAAAGCGATCAGAAATATATTGTGAAATTTAGATCTGTGTTGGTCTTAATTTTCTAGTTTTAATTTAGAGTTtat > 1:1330271/1‑128 (MQ=255) ttACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GAT‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGGTGGTCTTAATTTTGTAGTTTTTATATATATTTTATAATGt > 1:1526425/1‑128 (MQ=255) ttACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑TAAGCAAGCTATCAACAAAAAATTGAGAATTATAGATCTGAGTTGGTGTTAATTTTCTATTTTATATATATATTATAAAAAGt > 1:825987/1‑128 (MQ=255) aCCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaat > 1:1892705/1‑128 (MQ=255) acTATATAG‑‑‑‑TTA‑TT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata < 1:373817/127‑1 (MQ=255) cTATAGAG‑‑‑‑ATA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaataa < 2:1389858/128‑1 (MQ=255) agag‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑GAT‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGAATAAAATGGTGAAATTTAGATCTGAGTTTGTATAAAATTTTTATTTTTTATTTATATTTTATAAAGTTATTAAtt > 1:501601/1‑128 (MQ=255) ttA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑TCAAGCGATCAGCATAAAATTGTGAAATTTATATCTGAGTTTGTCTTAAATTTGTATTTTTTATATATATTTTATAAATTTAATAATTTATAtt > 1:1389858/1‑128 (MQ=255) tgatatatatatatatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑TATATCGCGCTGAATAAAATATTGTTATATATATATGAGTTTTTCTTAAATATTTATTTTTTATATATAGTTTATATAtttatttatttata > 2:1960879/9‑126 (MQ=255) aatgatatatatatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑AAAAGAGATCAAAAAAAAATGTTGAAATTTATATCTGAGTTTGTGTAAATTTTTTAGTTTATATATATATTATATAATGTTAATAATATAGAtt > 2:25408/7‑128 (MQ=16) ttaatgatatatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGCTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtttt < 1:1739140/122‑1 (MQ=255) atatatatatatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑TAAATATATCAAAATAAAATGTTTAAATATATATCTGAGTTTGTATTAAATTTTTATTTTTTATATATATTATATAAATTAAATAATATATAtttt > 1:1570261/5‑128 (MQ=255) tatatatatatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑GCAAGCGATCAGCATAAAATTGTGATATTTATATCTGAGTTTGTCTTAATTTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttttt > 2:1215932/4‑128 (MQ=255) tatatatatatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑GAAAGAGATCATCATAAAATGGTGAAATTTAGATCTGAGTTTGTATTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttttt < 2:1749659/125‑1 (MQ=255) atatatatatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑GCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATATAGATTTTTa > 1:1101765/3‑128 (MQ=255) atatatatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAat < 2:1589567/128‑1 (MQ=255) tatatatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTATATTTTTAGTTTTTATTTATATTTTATATAGTTAATAATTTATATTTTTAata > 1:1600199/1‑128 (MQ=255) atatatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑GCAAGCGATCAGCATAAAATGGATAAATTTAGATCTGAGTTGGTCTTAAATTTTTATTTTTTATTTATATTTTATAAAGTTTATAATTTAGATTTTTAatat > 1:701346/1‑128 (MQ=255) tatatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATAtt > 2:1516351/1‑128 (MQ=255) tatatatatatatatatatata‑‑‑‑‑‑‑‑t‑‑TCAAGCGATCAGCATAAAATTGTTAAATTTATATCTGTGTTGGTCTTAAATTTTTAGTTTTTATTTATATTTTATAAAGTTAATAATttatattttttatatttt > 1:1001540/1‑128 (MQ=255) | TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑‑‑TTA‑AT‑‑‑‑‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATA‑‑‑‑‑‑‑‑T‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTT > CP016816/437759‑438013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |