New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =896 (0.480)568 (0.350) 135/218 11.9 43.8% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 676 (0.420)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1336 total aligned reads displayed.

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGTTAAAAGTAATACTAAAA‑TTATTTAATGTTAATTAAAA  >  CP016816/165122‑165376
                                                                                                                                 |                                                                                                                                  
gATAATATTTTGTTTCATTATTTTTTAGCATTTGTATGAATTAGTAATAAAATAAAAATATTATGTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGc                                                                                                                                    <  1:2689400/128‑1 (MQ=255)
 ataataTTTATTTTAATTAATTTTTAGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTTGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAAAAGCt                                                                                                                                   <  1:2932014/128‑1 (MQ=255)
  taataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAATAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TTCAA‑ATTATTAAAAAATAAATTTGAACTTTTAAAAAATAGcct                                                                                                                                  >  2:2500471/1‑126 (MQ=255)
  taataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtt                                                                                                                                  >  2:1527808/1‑128 (MQ=255)
   aataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAATAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGAttt                                                                                                                                 >  1:760408/1‑128 (MQ=255)
    atattttcgtttaTTAATTTATCGCCCTTTTATGAATTAGTTATAAAATAAAAATATTATATTTTTATATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTTAACTTGTAAAAAAAAGCtttt                                                                                                                                <  2:3400990/116‑1 (MQ=255)
    atatTTAGTTTCATTAATTTATCTCAATTTTATGAATTATTAATAAAAAAAAAATATTATCTTTTTTTATATTTTTTTTATT‑TGCAA‑ATTTTTAAAAAATTAAATTGAACTTGTAAAAAAAAGCtttt                                                                                                                                <  1:412488/128‑1 (MQ=255)
     tatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATAAATTTGAACTTGTAAAAAATAGCttttt                                                                                                                               >  2:1615299/1‑128 (MQ=255)
       tttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttt                                                                                                                             >  2:512600/1‑128 (MQ=255)
       tttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttt                                                                                                                             >  2:752321/1‑128 (MQ=255)
           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttt                                                                                                                         >  1:3042609/1‑128 (MQ=255)
           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttt                                                                                                                         >  1:1216960/1‑128 (MQ=255)
              tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttttt                                                                                                                      >  1:2435799/1‑128 (MQ=255)
                aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGAtttttttttttttttt                                                                                                                    >  2:854600/1‑128 (MQ=255)
                     tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataa                                                                                                               >  1:1385872/1‑127 (MQ=255)
                       tATCGCACATGTAATAATTAGTAAGAAACTAAAACAAATATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTTAACTTGTAAAAAATACCTTTTTTTTTTTTTTTTtataatg                                                                                                             <  1:655496/128‑4 (MQ=255)
                        atagCACTTTAATTAATTATTAAGAAACAAAAACTATTTTCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATCTTTTTTTTTTTTTTTTtataatgg                                                                                                            <  1:1991286/125‑5 (MQ=255)
                          cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttttttttataatttaaa                                                                                                          >  1:468546/1‑118 (MQ=255)
                           gcaattgtttttattattAATAAAATAAAAATATTATTTTTTTTTTTATTTTTTGTTTT‑TTTAA‑ATTTTTTAAAAATTTATTTTTAATTTTAAAAAAT‑‑TTCTTTTTTTTTTTTTTTTTATAATGGaaa                                                                                                       <  2:2383633/116‑1 (MQ=255)
                              cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAatat                                                                                                    >  2:2121555/1‑128 (MQ=255)
                               ttGTATTAATTATTAATAAAATAAAAATATTATATTTTTAGATATTTTTTTTATA‑TTCTA‑ATTTTTAAAAAATTAATTTTTACTTTTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATaa                                                                                                  <  2:682744/128‑1 (MQ=255)
                               ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGAAAAtata                                                                                                   >  2:3055011/1‑128 (MQ=255)
                               attatttaaTTTGTAATAAACTTAAAATATTATATTTTTATTTATTTTTTGTTTA‑TTCAA‑ATTTTTAAAAAATTAATTTTTACTTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAAtata                                                                                                   <  2:2286812/121‑1 (MQ=255)
                                 ttttttatttttAAGAAAATAAAAAAATTTTAATTTTATATATTTTTTGTTTA‑ATCAA‑ATTTTTAAAAAATTAATTTTTAATTTTAAAAAAT‑‑TTCTTTTTTTTTTTTTTTTTATAATGGAAATATaaa                                                                                                 <  2:1265254/117‑1 (MQ=255)
                                  tattaattattaatAAAATAAAAATATTATTTTTTTTTATATTTTTTGTTTATTGAAA‑ATTTTAAAA‑AATTAATTTTAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                               <  1:3102406/128‑1 (MQ=255)
                                   tttaaatattaataaAATAAAAATTTTATATTTTTATATATTTTTTTTATA‑TTCAA‑AATTTTAAAAAATAAATTTGAACTTTTAAAAAAAAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                               <  2:1320332/119‑1 (MQ=255)
                                   aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATTTAAATATAAAt                                                                                                >  1:3536129/1‑128 (MQ=255)
                                         tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATTAAAATAAAAATTTTAgta                                                                                         >  1:3155713/1‑126 (MQ=255)
                                          attaataatcaaaaaataTTTTTTTTTTTTATTTTTTTTTTATA‑TTCAA‑ATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTa                                                                                        <  2:1884642/117‑1 (MQ=255)
                                          attaataaACTAAAAATATTTTATTTTTTTATATTTTTTTTTTT‑TTCAA‑ATTTTTTAAAAATTTAATTGTACATGTTAAAAATTTC‑GTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                         <  1:3474399/126‑1 (MQ=255)
                                          attaaacaacaaaaacttTTATATTTTTATATATTTTTTGTTTT‑TTCAA‑AATTTTTAAAAATTAATTTTAAATTTTAAAAAAAAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                       <  1:3203880/121‑1 (MQ=255)
                                          aGTAAGAAACTAAAAATATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAttt                                                                                     <  1:1888215/128‑1 (MQ=255)
                                           ttaataatataaaaataTTTTATTTTTATATATTTTTTGTATA‑TTCAA‑ATTTTTAAAAAATTAAATTTAAATTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                       <  2:378117/119‑1 (MQ=255)
                                                taaataaaaataTTATATTTTTATTTATTTTTTGTATA‑TTCAA‑ATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑TGTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTttgt                                                                                  <  2:1469391/124‑1 (MQ=255)
                                                aaactaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATTttg                                                                                   >  1:3653069/1‑128 (MQ=255)
                                                aaactaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATttttt‑t                                                                                >  2:2864805/1‑128 (MQ=255)
                                                  aattaaaataTTATATTTTTTTTTTTTTTTTTTATA‑TTAAA‑ATTTTTAAAAAATTTATTTTAAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTATATAATGGAAATATAAATTTTAGGTATTttgt‑t                                                                                <  2:59227/124‑1 (MQ=255)
                                                   ctaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTTGGTATttttt‑ttt                                                                              >  2:3192550/1‑126 (MQ=255)
                                                    taaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATGTAAttttt‑ttta                                                                             >  2:2717354/1‑125 (MQ=255)
                                                    taaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATAAAATTTTTAGTTATttttt‑tttaa                                                                            >  2:927433/1‑124 (MQ=255)
                                                     taaaataTTAATTTTTTACTTTTTTTTTGTTTA‑TTCAATATTTTAAAA‑AAAAAAATTCAAATTTTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTa                                                                           <  1:1145545/127‑1 (MQ=255)
                                                     aaaaataTTATTTTTTTATTTATTTTTTTTTTA‑TTTAA‑ATTTTTTAAAAATTAATTTTTAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTc                                                                             <  1:15800/128‑1 (MQ=255)
                                                      aaaataTTATATTTTTATTAATTTTTTTTATA‑TCTAA‑ATTTTTAAAAAATTAATTTTAATTTTTAAAAAAAA‑‑‑‑TCATTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAg                                                                         <  2:2052510/128‑1 (MQ=255)
                                                       aattattattatTTTTTATTTTTTTTTTATA‑TTCAA‑ATTTTTAAAAAAATAAATTTAACATTTTAAAAAT‑‑TTCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTaa                                                                          <  1:3440122/125‑1 (MQ=255)
                                                        agatttatATTTTTATTTATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTTAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAg                                                                         <  1:3790435/124‑1 (MQ=255)
                                                         ctaTTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTAAAATATAAAATTTAGTAATTTTTT‑TTTATaata                                                                        >  2:1019426/1‑126 (MQ=255)
                                                          tattatCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTTAGGTATTTTTT‑TTAATAAGTa                                                                       >  1:2383950/1‑128 (MQ=255)
                                                           attatATTTTTTTATATTTTTTTTATA‑TTCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCt                                                                    <  1:2037905/128‑1 (MQ=255)
                                                            ttatCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATATTGAAATTATAATtttttgtttttttgt‑tttatatttata                                                                     >  2:311706/1‑117 (MQ=255)
                                                             tatCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTAAAATAAAAATATAAATTTTAGATATttttt‑ttaaaaattataa                                                                    >  1:1470273/1‑116 (MQ=255)
                                                              ttttttttATATTTTTTTTTTATA‑TTCAA‑AATTTTAAAAAATTAAATTTAAATTTTAAAAAAAATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCt                                                                    <  1:3385334/125‑1 (MQ=255)
                                                              atCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTTTAAAAATTAATTTGCTCTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATTTAAATTTTA‑GTATTTTTTGTGTATAAGTTTCTa                                                                   >  2:2784462/1‑128 (MQ=255)
                                                                  ttttATATATTTTTTTTATA‑TTTAA‑ATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTaaaaaa                                                              <  1:534971/128‑1 (MQ=255)
                                                                  ttttAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTAGTTTTTTTTT‑TGACTAATTAAATaaaa                                                                >  2:2964147/1‑128 (MQ=255)
                                                                  ttttAGATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATGTATTTTGT‑TTTATAATTATATaaaaaa                                                              >  2:4473/1‑128 (MQ=255)
                                                                      tattatTTTTTTTTTA‑TATAA‑ATTTTAAAAAAATTTTTTTTTAATT‑TTAAAAATA‑‑TATTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAg                                                          <  2:3244267/125‑1 (MQ=255)
                                                                      atttatTTTTTTTATA‑TTGAA‑ATTTTTAAAAAATTAATTTTAACTTTTAAAAAATA‑‑‑TATTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAg                                                          <  2:3332279/125‑1 (MQ=255)
                                                                       tatatTTTTTTTATA‑TTAAA‑ATTTTTAAAAAAATAATTTTAAATTTTTAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAg                                                          <  1:2295147/127‑1 (MQ=255)
                                                                       gATATTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTTTAAAAAATAG‑‑ATTTTTTTTTTTTTTTTTATAATTTAAAAAAAAATTTAAATTATTTTTT‑TATATAATTATAaaaaaaaaaat                                                          >  1:2630889/1‑125 (MQ=255)
                                                                        atatTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATAAAAATTTTAGTAATTTTTT‑TTTATAATTATATAAAAAAATaaa                                                         >  2:1956974/1‑126 (MQ=255)
                                                                        atatTTTTTGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAAAAAAAATTATAGATATTTTTT‑TGTTTAAGTATATAAAAAAATATaa                                                        >  2:2583640/1‑128 (MQ=255)
                                                                           ttttatGTATA‑TTCAA‑ATTTTTAAAAAATTAATTTTAACTTGTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGa                                                    <  2:1087170/128‑1 (MQ=255)
                                                                            tttttGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATGTAAATAAAAATTTTAGTATTTTTTT‑TTTAAAAGTAAATAAAAAAATATaaat                                                      >  1:2116296/1‑127 (MQ=255)
                                                                            tttttGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGTTATTTTTT‑TTTCTAATTATATAAAAAAATATaatgt                                                     >  1:945293/1‑125 (MQ=255)
                                                                            tttttGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTATGTATTTTTT‑TGTATAAGTATATAAAAAAATAaaaatta                                                    >  1:1283845/1‑125 (MQ=255)
                                                                              ttttttttattaaa‑aTTTTTTAAAAATTAATTTTAAATTTTATAAAATA‑‑TATTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGa                                                    <  1:1009766/116‑1 (MQ=255)
                                                                               ttttattataaaa‑aTTTTAAAA‑AATTAATTTTAAATTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGaaa                                                  <  1:3985687/117‑1 (MQ=255)
                                                                               ttGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTAT‑‑TGTAATTAAAATTTTTAGTTTTTTTTT‑TTAATAATTTTATAAAAAAATA‑AAAGTaaaa                                                 >  1:3311861/1‑128 (MQ=255)
                                                                               ttGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATTTTTT‑TTAATAATTTTCTAAAAAAATATAAAGTaa                                                   >  1:3598077/1‑128 (MQ=255)
                                                                                tttata‑TTCAA‑ATTTTTAAAAAAATAATTTGTAATTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGaaaaa                                                <  2:363030/126‑1 (MQ=255)
                                                                                tGTATA‑TTTAA‑TTTTTTAAAAAATTAATTTTAAATTTTATAAAATA‑‑TATTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGaaaa                                                 <  1:3915845/128‑1 (MQ=255)
                                                                                tGTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATAAAAATTTTATGTTTTTTTT‑TGTATAATTATATAAAAAAATAAAAATTaaaa                                                 >  1:710882/1‑128 (MQ=255)
                                                                                 gTATA‑TGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTAAAATTAAAATTTAAGTTTTTTTTT‑TGTATAATAATATAAAAAAATAAAAAGAaaaaaa                                               >  1:2865191/1‑128 (MQ=255)
                                                                                    ttttgtaa‑aTTTTTAAAAATTTTATTTGAAATTTTAAAAAAT‑‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAa‑t                                             <  1:839056/122‑1 (MQ=255)
                                                                                     tatttaa‑aTTTTTAAAAAATTAATTTGATTTTTTAAAAATTA‑‑‑‑TATTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TAtt                                          <  1:2779001/123‑1 (MQ=255)
                                                                                       tGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAATTTTTAGGTATTTTGT‑TTTATAATTATATAAAAAAATATAAAGGAAAAAA‑TAtt                                          >  1:2249675/1‑128 (MQ=255)
                                                                                         cAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATATTGAAAAATTAAATTTT‑TGTTTTTTTT‑TTTTTAATTTAATAAAAAAAAAAAAATAAAAAAATTATTGt                                        >  2:3456213/1‑128 (MQ=255)
                                                                                           a‑aTTTTTAAAAAATTTATTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGTTa                                      <  1:1611582/128‑1 (MQ=255)
                                                                                             aTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGGTTTTTTTT‑TGTGTAATTTTATAAAAAAATATAAAGTAAAAAA‑TATTTTTa                                      >  1:892228/1‑128 (MQ=255)
                                                                                             aTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAttt                                                                                     >  1:3239166/1‑81 (MQ=255)
                                                                                             aTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATATTGTAAATTTAAATTTTAGTTATTTTGT‑TTTATAATTATATAAAAAAATATAATTAAAAAAA‑TAttttataaa                                   >  1:598269/1‑121 (MQ=255)
                                                                                                   aaaTAATTAATTTTTAATTTTTAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGTTAAAAGTaa                               <  1:3721785/128‑1 (MQ=255)
                                                                                                    aaaaattatttTGAACTTGTAAAAAATAG‑‑GTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGTTAAAAGTAAt                              <  1:1428890/125‑1 (MQ=255)
                                                                                                     aaaattaattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATGGAAATATAAATTTTATTAAATTTTT‑TGAAATATTAAATAAAAAATTAAAAATTAATAAA‑AATTGTTAAATGTAATa                             >  2:1818324/3‑128 (MQ=255)
                                                                                                      aaattaattTTTATTTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGTTAAAAGTAATAc                            <  2:3872069/127‑1 (MQ=255)
                                                                                                      aaattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTTGTTTTTTTTT‑TTTTAAATTAAATAAAAAAAAAAAAAGTAAAAAA‑TTTTTTTAAAATTaaaaa                            >  2:3923410/2‑125 (MQ=255)
                                                                                                       aattaattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATTGAAATATAAATTTTATTTTATTTAT‑TTTATAATTATATAAAAAAATTAAAAGGTAAAAT‑TATtttttattttatttat                           >  1:2552410/1‑116 (MQ=255)
                                                                                                        attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTAGGTATTTTTT‑TGTATAATTTTATAAAAAAATAGAAAGGAAAAAA‑TTTTGTTAATAGTTataata                          >  2:3713625/1‑128 (MQ=255)
                                                                                                        attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATAAAAATTTTAGTTTTTTTTT‑TTTATAATTAAAAAAAAAAATAAAAATTAAAAAA‑TATTTTTAAATTTAATaaaa                          >  2:1188519/1‑125 (MQ=255)
                                                                                                        attaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATATTGTAAATTAAAATTTTTGGTATTTTGT‑TGTAAAATTATATTAAAAAAAATAAAGGAAAAAA‑TATTTTTAAAATTAATaaaaa                         >  1:2174382/1‑124 (MQ=255)
                                                                                                         ttaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTAT‑ATTTAAAAATAAATTTTTTGTATTTTTT‑TGTTAAATTATATAAAAAAATAAAAAATAAAAAA‑AATTTTTAAATTTAATTATaaa                        >  2:1728481/1‑128 (MQ=255)
                                                                                                         ttaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTAAAATTGAAAAATAAATTTAAGGTTTTTTTT‑TTTATAAGTATATAAAAAAAATTAAATGAAAAAA‑TATTTTAAAAAataataaaaa                         >  2:352482/1‑124 (MQ=255)
                                                                                                         ttaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTAATTTTTT‑TTTCAAATTATCTAAAAAAATAAAAAGAAAAAAA‑TATTTTTAAAAGTAAAAATaaa                        >  2:1409624/1‑128 (MQ=255)
                                                                                                          taattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TATTGGAAATAAAATTTTTAGGTTTTTTTT‑TGTATATTTATATAAAAAAATTTAAA‑GAAAAAA‑TTTTTTTaaaatttattaataa                        >  1:3842527/1‑117 (MQ=255)
                                                                                                               tGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTATAAAATGTAAATATAAATTTTAGTTTTTTTTT‑AGTAAAATTAAAATAAAAATTAGAAATGAAAAAA‑TATTGTTAAAATTATTAATAAAa‑taa                   >  2:2218268/1‑126 (MQ=255)
                                                                                                                gAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAATTATAAATTTTAGGTATTTTTT‑TTTATATTTATATAAATAAATATAAATCAAAAAA‑TTTTTTTAAAATTAAATCTAAAA‑TTAttt                >  1:1045500/1‑128 (MQ=255)
                                                                                                                   cTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCAAAAAAAATATAAAGAAAAAAA‑TATTGTTAAAATTAAAAAAAAAA‑TTATTAAAt             >  1:1729418/1‑128 (MQ=255)
                                                                                                                     tttAAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGTTAAAAGTAATACTAAAA‑TTATTTAATg            <  1:134091/126‑1 (MQ=255)
                                                                                                                     tGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTA‑AAGGTAAAATTAAATTTATGTTTTTTTGT‑TG‑GTAATTAAATTAAAAAAAATAAAAGAAAAAA‑ATTTTTTAAAAATAATAAAAAAATTTATTTAAtt            >  2:4021898/1‑127 (MQ=255)
                                                                                                                       tAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTTT‑TTTCTAATTATATAAAAAAATATAAAGGAAAAAA‑TATTTTTAAAATTAATACTAAAA‑TTATTTAATGtt          >  1:1817466/1‑128 (MQ=255)
                                                                                                                                 |                                                                                                                                  
GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAA‑ATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGT‑TGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGTTAAAAGTAATACTAAAA‑TTATTTAATGTTAATTAAAA  >  CP016816/165122‑165376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.