BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	= 437880	279 (0.190)	517 (0.290) +ATAT	136/186	7.2	57.2%	intergenic (‑184/+238)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
*	?	CP016816	437881 =	438 (0.240)	517 (0.290) +ATAT	136/186	7.2	57.2%	intergenic (‑185/+237)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 987 total aligned reads displayed.

GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008

gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAATTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGATGCAAAGCAAATAACTCCATATTACGTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑a                                                                                                                                            >  1:1637351/1‑128 (MQ=255)

gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAACCCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑a                                                                                                                                            >  2:2553455/1‑128 (MQ=255)

    cTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑a                                                                                                                                      >  2:1684286/1‑128 (MQ=255)

    cTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑a                                                                                                                                      >  2:1120604/1‑128 (MQ=255)

     ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑at                                                                                                                                     >  2:1629987/1‑128 (MQ=255)

     ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑at                                                                                                                                     >  2:528893/1‑128 (MQ=255)

      tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAACCCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑ata                                                                                                                                    >  1:1319508/1‑128 (MQ=255)

      tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGATTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑ata                                                                                                                                    >  2:2748560/1‑128 (MQ=255)

      attttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACATCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑ata                                                                                                                                    >  1:499834/3‑128 (MQ=255)

       tttttaGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGATATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑agat‑‑aaaa                                                                                                                                   >  2:3717032/2‑125 (MQ=255)

       aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTACATATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atat                                                                                                                                   >  1:2700009/1‑128 (MQ=255)

        tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atata                                                                                                                                  >  2:1424042/1‑128 (MQ=255)

        tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atata                                                                                                                                  >  2:1321609/1‑128 (MQ=255)

         aactacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatat                                                                                                                                 >  2:3073567/12‑128 (MQ=255)

                aaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatata                                                                                                                      <  1:2896644/124‑1 (MQ=255)

                 ttGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatat                                                                                                                     >  1:3340180/1‑128 (MQ=255)

                   gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatat                                                                                                                   >  2:3394401/1‑128 (MQ=255)

                   gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatat                                                                                                                   >  1:1000692/1‑128 (MQ=255)

                   gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAACCAAACCAAAAACCACCATATAACCTATAGAGATAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatat                                                                                                                   <  1:1709968/128‑1 (MQ=255)

                    tAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTTTTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTTA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatata                                                                                                                  <  2:2289484/128‑1 (MQ=255)

                     aattttAATTTTTAATAAATATTATAAATAAAAAATGTTTATTTAAAAAAAATATTTTATTAAATTAATCAAATCAAAAACATCCATATTTAATATAGAGTTAT‑‑T‑‑‑‑T‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatat                                                                                                                 <  2:1090964/125‑1 (MQ=255)

                      aGTTTAATTTTTAATAAATATTATATATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATGAATCAAATAAAAAACCTCAATATTAAATATAGAGTTAA‑‑T‑‑‑‑t‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatata                                                                                                                <  2:881556/128‑1 (MQ=255)

                        tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatata                                                                                                              >  2:1867695/1‑128 (MQ=255)

                         tttttttttAATAAATATTATAAATAAAAATTTTATTTATAAAATAAATATTTTTTTAAATGTAGCAAATCCAAAACCTCAATATAACATATAGAGATAA‑‑T‑‑‑‑T‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatat                                                                                                             <  2:852741/124‑1 (MQ=255)

                         ttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatat                                                                                                             <  1:68825/128‑1 (MQ=255)

                         ttCATTTTAAAAAAATATTATAAATAAAAAATTTATTTTTAAAAAAAATATTTTATTAAAACAATCAAACAAAAAACCTCCATATAAACAATAGAGATAA‑‑A‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatat                                                                                                             <  1:3934231/128‑1 (MQ=255)

                          taaTTTTTAATAAATATTATATATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATTAATCAAAGCAAAAACCTCCATATTACATATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatata                                                                                                            <  2:1382086/126‑1 (MQ=255)

                          tCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatata                                                                                                            <  1:3028755/128‑1 (MQ=255)

                           atttttttATATATATTATATATATAAATTTTTTTTTTAAAATAAATATTTTATTAAATGAATCAAATAAAAAAAATATATATTTAATATATAGTTAA‑‑T‑‑‑‑T‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatata‑‑t                                                                                                         <  2:153541/126‑1 (MQ=255)

                            aTTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATATATATTTTATTAAATGTATCTAATAAAAAAACTCAATATTAACTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatata‑‑ta                                                                                                        <  2:3900584/128‑2 (MQ=255)

                            aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatatgca                                                                                                          >  1:1089382/1‑125 (MQ=255)

                            aTTTTTAATAAATATAAGAAATAAAAATTCTATATTTAAAATAAATATTTTAGTAAAAGAAGCAAATAAAAAACCTCAAAAATACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑g                                                                                                      <  1:1561307/128‑1 (MQ=255)

                                ttAATAAATATTAGAAAAAAAAATTGTATTTTTAAAATAAAAATTTTATGAAAACAACCAAACCAAAAACATCCATATTACCTATAGAGATAA‑‑A‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatata‑‑tatata                                                                                                    <  1:2214339/128‑6 (MQ=255)

                                 taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACGTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑TC‑AAGc                                                                                                >  1:2519748/1‑128 (MQ=255)

                                 taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTAAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatatgcaagctc                                                                                                     >  2:3823926/1‑120 (MQ=255)

                                  aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatatgatagagat                                                                                                    >  1:3856569/1‑119 (MQ=255)

                                  aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑‑‑AT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGAt                                                                                             <  2:3552700/128‑1 (MQ=255)

                                  aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatata‑‑tatattaa                                                                                                  >  1:1872943/1‑121 (MQ=255)

                                    taaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGAt                                                                                             <  1:2129568/128‑1 (MQ=255)

                                     aaataTTATAAATAAAAATTTTATTTTTAAAATAAATATTTTATTAAAATAATAAAATAAAAAAACTACATATAATCTATAGAGTTAA‑‑TTA‑‑T‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGa                                                                                              <  2:2348498/128‑1 (MQ=255)

                                      aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGAt                                                                                             >  1:946031/1‑128 (MQ=255)

                                      aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatatatatatatata‑‑taagcaagagat                                                                                              >  2:597026/1‑117 (MQ=255)

                                      aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑atat‑‑atatata‑‑‑‑tatat                                                                                                                       >  1:3219603/1‑105 (MQ=255)

                                        tattatAAATATAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCTAAAAAATCCATAATAAATATATATTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGc                                                                                         <  1:872883/128‑1 (MQ=255)

                                         ataataaaTAAAAATTTTATTTTTAAAATAAATATTTTATTAAATGAAGCAAATCAAAAACCTCGATATTACCTATAGAGTTTA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCa                                                                                        <  2:2421675/123‑1 (MQ=255)

                                             gataTAAAATTTTTTTTTTTAAAATATATATATTAGTAAACGAATCAAATCAAAAAACTGTATTTTAACTATAGAGATAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATaaa                                                                                    <  1:3554267/125‑1 (MQ=255)

                                               aaTAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCTCCATATTACATATAGAGTTAA‑‑TTA‑‑T‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATaaa                                                                                    <  1:3098213/128‑1 (MQ=255)

                                                 tAAAAATTTTATTTTTATAATAAATATTTTAGGAAATTAAGCAAATCTAAAAAATAAATATTAACTATAGAGATAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATATTT‑‑GC‑AAGCGATCAGCATAAAAt                                                                                  <  1:1387114/128‑1 (MQ=255)

                                                 tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑TA‑TCAAAGAGATCAGCATaaact                                                                                  >  2:1224859/1‑126 (MQ=255)

                                                 tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAAttg                                                                                >  1:554096/1‑126 (MQ=255)

                                                   aaaaTTGTATTTTTAATATAAATATTTTAGGAAAAGAAGCAAATCAAAAACCTCCATATTAAATATAGAGTTAA‑‑T‑‑‑‑GATAT‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAAt                                                                                  <  1:1815521/128‑1 (MQ=255)

                                                    aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GATAT‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATg                                                                                 >  2:958255/1‑128 (MQ=255)

                                                    aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑TAGAGATCAGCTTAAAATGGTGa                                                                             >  1:2305958/1‑128 (MQ=255)

                                                     aaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGaa                                                                            <  1:534426/128‑1 (MQ=255)

                                                       ttttATTTTTAAAATATATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATAACCTATAGAGTTAA‑‑TTATAT‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTg                                                                              <  2:1484675/125‑1 (MQ=255)

                                                        tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑TAATC‑AAGCGATCCTCATAAAATGGTGaat                                                                           >  2:1815221/1‑127 (MQ=255)

                                                            tttttAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGa                                                                     <  1:2006194/128‑1 (MQ=255)

                                                              tttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑TA‑AATCTATAATCATAATATGGAGAAATTTATATc                                                                   >  2:293894/1‑128 (MQ=255)

                                                                tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGGGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑AC‑AATCGATCATAATAATATGGTGATATTTATATc                                                                   >  2:2668164/1‑128 (MQ=255)

                                                                tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GA‑AATCGCTCAGAATAAAATTGTGATATTTAGATCTg                                                                 >  2:3231255/1‑128 (MQ=255)

                                                                 aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCt                                                                  >  1:427182/1‑128 (MQ=255)

                                                                  aaataaatATTTTATGAAATTAAGCAAAGCAAAAACCTCAATATTTCCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                 <  1:3397012/128‑1 (MQ=255)

                                                                      atatatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                             <  2:1012361/126‑1 (MQ=255)

                                                                      aaataTTTTATGAAATTAACCAAAGCAATAAACTCCATATTAACTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑‑‑AT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑C‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTc                                                         <  2:453742/128‑1 (MQ=255)

                                                                        atatTTTATGTATTGAATCATAGAAAAAACATCTATATTAACTATAGAGTTAA‑‑T‑‑‑‑GATAT‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                             <  1:1144180/128‑1 (MQ=255)

                                                                            tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GATAT‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GA‑AAGAGATCAGAATAAAATGGTGAAATTTATATCTGAGtagttc                                                         >  1:2777858/1‑123 (MQ=255)

                                                                             ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GA‑AAGATATCATCATAAAATTGTGAAATTTATATATGAGTTGCTCTTa                                                      >  2:4012452/1‑128 (MQ=255)

                                                                              tatgAAATGAAGCACAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                     <  1:3732078/125‑1 (MQ=255)

                                                                                taaaaTTAATCAAATAAAAAAACTCAATATAAAATATAGAGATAT‑‑TTA‑‑T‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAt                                                   <  1:628141/126‑1 (MQ=255)

                                                                                  aaaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                               >  1:208043/1‑128 (MQ=255)

                                                                                   aaTGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATATACATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTg                                                <  1:822832/128‑1 (MQ=255)

                                                                                      gAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAg                                             <  1:1927547/128‑1 (MQ=255)

                                                                                          aaaataaaaaaaCTCTATATTAACTATAGTGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAATTGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                       <  2:2205018/122‑1 (MQ=255)

                                                                                            aatcaaaAACCTCAATATTATCTATAGAGTTAATTT‑‑‑‑T‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                       <  1:2636213/125‑1 (MQ=255)

                                                                                             ataaaaaaaCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt                                    <  1:124883/125‑1 (MQ=255)

                                                                                             agcaaaAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATTGTGAAATATATATCTGAGTTTGTCTTAAATTTGTAGTTtttat                                      >  1:3298201/1‑128 (MQ=255)

                                                                                             agcaaaAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGTTCTTAAATTTGTAGATtttat                                      >  1:1609326/1‑128 (MQ=255)

                                                                                              gcaaaAACCTCCATATTACCTCTAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt                                     <  2:767232/128‑1 (MQ=255)

                                                                                              gcaaaAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GATATATATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGAACAGAATAAAATAGTGAAATATAGATCTTAGTTTCTATTAAATTTTTAgatag                                         >  2:2992800/1‑124 (MQ=255)

                                                                                              gcaaaAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GATAT‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATATGAGTTGGTCTTAAATTTGTATTTttta                                       >  1:2861438/1‑128 (MQ=255)

                                                                                               caaaAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GATATATATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑TC‑AAGAGATCATAATAAAATTGTGAAATTTATATATGAGTTTGTATTAAATTTATAtttttt                                        >  1:1492877/1‑128 (MQ=255)

                                                                                                aaaaaCCTCCATATTACATCTAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattta                                   <  2:3962561/128‑1 (MQ=255)

                                                                                                  aaaCCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTtata                                 >  1:31739/1‑128 (MQ=255)

                                                                                                   aaCCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑‑‑AT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta                            >  1:3429428/1‑128 (MQ=255)

                                                                                                      ctacATAATACATATAGATTTAA‑‑T‑‑‑‑C‑‑‑‑‑‑TAAT‑‑ATATTTT‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑TAGCGATCAGCATAAAATGTTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                           <  2:2112188/125‑1 (MQ=255)

                                                                                                        ctatatTACCTATAGAGTTAA‑‑TTA‑‑T‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                           <  2:3310951/126‑1 (MQ=255)

                                                                                                        ccATATTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTATATTTATAGTTtat                           >  2:2800029/1‑128 (MQ=255)

                                                                                                        ccATATTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                           <  1:2397815/128‑1 (MQ=255)

                                                                                                          atatTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATATAGATCTGAGGTGGTCTTAAATTTGGAGTTTTTATTTATAGTTTaaaa                         >  1:3635026/1‑128 (MQ=255)

                                                                                                          atatTACCTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑AA‑AAGATATCAAAAAAAAATTGTGATATTTATATCTGTGTTTCTATTAAATTTGTATTTTATATATATATTTTATaa                         >  2:1918964/1‑128 (MQ=255)

                                                                                                          atatTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTATATTTTTTATATATATTTTATaaat                       >  2:3173613/1‑127 (MQ=255)

                                                                                                             ttACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATATATTTATATATATATATATA‑‑TAATA‑AAGCGATCATGAAAAAATTTATATATTTATCTCTGTGTTGGTAATAAATTTTTTGTTTTTATTTATTTTTtata                          >  2:2866899/1‑128 (MQ=255)

                                                                                                              ttccTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGAGCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGtt                     <  2:3654353/126‑1 (MQ=255)

                                                                                                               aCCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑CAGCGATCAGCAAAAAATGGTGAAATTTATATCTGAGTTGGTATAAAATTTTGTGTTTATATTTATTGTTTATAaaataaat                  >  2:676037/1‑128 (MQ=255)

                                                                                                                ccTATAGAGTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑TA‑AAGAGATAAAATTAAAAAGTTATAATTTATATATGAGTTTTTATTAAATTTTTATTTTATATATATATTTTATaaattaaa                   >  2:2039519/1‑123 (MQ=255)

                                                                                                                     agagTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTTAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTATATAAAGTTAATAAtt              >  1:3976143/1‑128 (MQ=255)

                                                                                                                     agagTTAA‑‑T‑‑‑‑GAT‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GA‑AAGCGATCAGAATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAATTTAATAttt              >  2:1962038/1‑128 (MQ=255)

                                                                                                                                  taatgatatatat‑‑atatata‑‑‑‑tatatatatatatata‑‑t‑‑GC‑AAGCTCTCAGCAAAAAATTGTGATATTTAGATCTGATTTGGTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAATTTAATAATATAg           >  2:3462851/10‑128 (MQ=37)

                                                                                                                                    taatgatatat‑‑atatata‑‑‑‑tatatatatatatata‑‑t‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAt         <  1:2974433/121‑1 (MQ=255)

                                                                                                                                       tgatatat‑‑atatata‑‑‑‑tatatatatatatata‑‑t‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtttt      >  1:74317/5‑128 (MQ=255)

GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑T‑‑‑‑G‑‑‑‑‑‑ATAT‑‑ATATATA‑‑‑‑TATATATATATATATA‑‑T‑‑GC‑AAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.