| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,538,109 | 0 | A | C | 43.6% | 130.0 / 32.6 | 78 | G219G (GGT→GGG) | nanM | N‑acetylneuraminic acid mutarotase |
| Reads supporting (aligned to +/- strand): ref base A (40/4); new base C (0/34); total (40/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.12e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGC > NC_000913/4537964‑4538249 | ccGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCttt > 2:134522/1‑151 (MQ=255) gCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑At > 2:916868/1‑151 (MQ=255) cAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑Att > 2:622402/1‑151 (MQ=255) cAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑At < 2:139413/150‑1 (MQ=255) aaaaCCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑Att < 2:28160/150‑1 (MQ=255) aaaaCCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTc > 1:12801/1‑151 (MQ=255) ccGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTc‑aca > 1:862930/1‑150 (MQ=255) cGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑c < 2:905627/151‑1 (MQ=255) gCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑ccgccg > 1:1144075/1‑151 (MQ=255) ctccATCTGGTGATGAGCCGGGAGCAAGCTTATTCCATTTTAATTTATTACCGGTGAAATCAAGTTAAAATACGGCTTCCGTTCGCAATCCTGTTTTGGCTTCGCC‑TTTAATAAG‑CCGGGTTTTATCCCCTTT‑ATTC‑ACAA‑Ccgccgc < 2:1133127/146‑1 (MQ=255) aTCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGcc > 1:5939/1‑151 (MQ=255) atgaGACGGGAGCAAGCTTATTCCATTTTAAATTATTCCCGGTAAAATCAAGTTAAAATCCGGCATCCTTTCGCAATCCGGTTTTGGTTTCGCA‑TTTAATAAG‑CCAGGTTTTACCCCTTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTa < 1:1144530/151‑1 (MQ=255) gagaCGGGAGCAAGTTTTTTCCATTTTAAATTATTCCCGGTAAAATAAATTTAAAATACGGCACCCGTTCGCAACCCTGTTTTGGCTCCCCC‑ATAAATAAG‑CCAGTTTTTATCCCTTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTAc < 2:834885/150‑1 (MQ=255) gCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGAtt > 2:409035/1‑151 (MQ=255) cAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTc > 2:862070/1‑151 (MQ=255) aaGCTTATTCTATTTAAAATTATTCCCGGTAAAATAAAGTTAAAATACGGCACCCTTCCGCAATCCTGTTTTGGCTTCGCC‑ATAAAAAGG‑CCAGGTTTTATCCCCTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTc < 2:1164386/150‑1 (MQ=255) aaGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCg > 2:1029462/1‑151 (MQ=255) gtttATTCCATTTTAAATTATTCCGGGTGAAATCAAGTTCAAACACGGCATCCGTCCGCAATCCTGTTTGGGCTTCGCC‑ATTAATAAG‑CCAGTTTTTACCCCCTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGc < 1:11047/148‑1 (MQ=255) cTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGcc > 1:333356/1‑150 (MQ=255) ttATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGcc > 2:595635/1‑149 (MQ=255) tATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGc > 1:780473/1‑151 (MQ=255) ccATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGt > 1:745628/1‑149 (MQ=255) cATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAAc > 2:921329/1‑151 (MQ=255) ttttAAATTATTCCCGGTAAATTCAAGTTAAAACACGGCATCCGTTCGCATTTCTGGTTTGGTTTCCCA‑ATTAATAGC‑CCAGGTTTTACCCCTTTT‑ATTC‑AAAA‑CCGCCGCGCCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACt < 2:89139/150‑1 (MQ=255) tttaAAATTATTACCGGTAAAATAAAGTTAAAATACGGCATCCGTTCGCAACCCGGTTTGGGTTTCGCC‑ATAAATAAG‑CCAGGTTTTATCCCTTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTa < 2:40384/147‑1 (MQ=255) ttAAATTATTACGGGTGAAACAAATTTAAAATCCGCCATCCGTCCGCAATCCTGTTTTGGCTCCGCC‑ATAAAAAAG‑CCAGTTTTTACCCCCTTT‑ATCC‑CCAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTcc < 2:436830/150‑1 (MQ=255) ttAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTCCCGTACCAGGGCGATTCGCCAGCGTAACTcc > 1:755577/1‑150 (MQ=255) aaaTTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCAtt > 2:641321/1‑151 (MQ=255) cgggtaaaacaaaGTTAAAATAGGGCACCCTTTCGCAACCCGGTTTGGGCTTCGCC‑ATAAAAAAG‑CCAGTTTTTACCCCCTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGtt < 1:231934/139‑1 (MQ=255) ccGGTGAAATCAATTTAAAATACGGCATCCTTTCGCAACCCTGTTTTGGCTTCGCC‑ATAAAAAAG‑CCGGTTTTTATCCCCTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTgtgt < 1:827551/149‑1 (MQ=255) ccGGTAAAATCAATTTCAATTCCGGCACCCTTTCCCAATCCTGGTTTGGTTCCCCC‑ATTAATAAC‑CCGGTTTTTATCCCCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTgtgt < 1:231333/149‑1 (MQ=255) taaaaTCAAGTCAAATTACGGCATCCGTCCTCAATCCTTTTTTTGTTTCGCC‑TTTAAAAAG‑CCAGGTTTTATCCCTTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAgg < 1:464644/148‑1 (MQ=255) aaaaCAAGTTAAATTACGGCATCCGTTCGCAATCCGGTTTTGGCTTCGCC‑ATTAAAAAG‑CCAGGTTTTATCCCCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGa < 1:947794/150‑1 (MQ=255) aaaTCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGAt > 1:870448/1‑151 (MQ=255) aaTCAAGTTCAAATACGGCATCCGTTCACAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATc > 1:377848/1‑151 (MQ=255) cAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaa > 2:1096687/1‑150 (MQ=255) gTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaaa > 1:155079/1‑148 (MQ=255) ttCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGac > 1:187387/1‑151 (MQ=255) cAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGaca > 2:897122/1‑150 (MQ=255) aaatcgggCACCGGTTCGCAATCCTGTTTGGGCTTCGCA‑ATTAAAAGG‑CCAGTTTTTACCCCCTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGac < 1:1064024/142‑1 (MQ=255) tACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGacaac > 1:98620/1‑148 (MQ=255) cGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGaa > 2:1018061/1‑150 (MQ=255) ggCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAAc > 1:795050/1‑151 (MQ=255) ggCACCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCCCCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGaa < 1:910769/149‑1 (MQ=255) ccGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTAtt > 1:422868/1‑151 (MQ=255) ccGTTCGAAACCCTGTTTTGGTTTCGCC‑TTAAAAAAG‑CCAGTTTTTACCCCCTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGaaa < 1:223890/145‑1 (MQ=255) tCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTga > 2:243179/1‑149 (MQ=255) gCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTgaaga > 1:522473/1‑150 (MQ=255) cgaaccccggTTTGGGTTCCCC‑AAAAAAAAACCCAGTTTTTACCCCGTTT‑ATCC‑AAAC‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGaa < 2:860425/131‑1 (MQ=255) cccaTCCCGGTTTGGCCTCCCCTATTAAAAAG‑CCTGTTTTTATCCCCTTT‑ATCC‑AAAC‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTga < 2:264305/145‑1 (MQ=255) atccttggtttggttTCCCC‑ATAAAAAAC‑CCGGGTTTTACCCCTTTT‑TTCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTgaaga < 2:337366/143‑1 (MQ=255) acccTGGTTGGGCAACACC‑TTTAATCGG‑CCATGTTTTATCCCTTTT‑ATCC‑ATAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaat < 1:191228/148‑1 (MQ=255) tcttgttttGCCTCCCCC‑ATTAAAAAG‑CCGTGTTTAGCCCCTTTT‑ATTC‑ACAC‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTga < 2:351065/137‑1 (MQ=255) ccTGTTTTGTTTTCGCC‑ATAAATAAC‑CCAGTTTTTACCCCTTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaata < 1:853167/149‑1 (MQ=255) ccTGTTTTGGCTTCCCC‑ATAAAAAAG‑CCAGTTTTTACCCCCTTT‑TTCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaataat < 2:165160/151‑1 (MQ=255) ccTGTTTGGGCTCCCCC‑TTTAAAAGG‑CCGGTTTTTACCCCCTTT‑TTTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaata < 1:354917/149‑1 (MQ=255) tggtttggttCCGCA‑ATAAAAAAG‑CAGGTTTTTACCCCCTTA‑ATCC‑ACAC‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaataat < 1:914227/149‑1 (MQ=255) tttGGTTTCGCC‑ATTAATAAC‑CCGGGTTTTATCCCCTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTgaag < 1:895137/139‑1 (MQ=255) tttGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAAtcttct > 1:84438/1‑151 (MQ=255) ggCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCt > 1:440263/1‑151 (MQ=255) ggCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCt > 2:466942/1‑151 (MQ=255) ggCTCCGCC‑ATTAAAAAC‑CCAGTTTTTATCCCCTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAaataa < 2:969522/142‑1 (MQ=255) gtatcctcattaaataaA‑CCAGGTTTTATCA‑CTTT‑ATTCAAAAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTg < 1:133335/137‑1 (MQ=255) gttccccctttAATAAG‑CCAGGTTTTATCCCTTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCt < 2:397389/141‑1 (MQ=255) tccccc‑ATTAAAAAC‑CCAGTTTTTACCCCTTTT‑TTCC‑AAAC‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCtt < 2:1144046/145‑1 (MQ=255) tCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCttttt > 2:358053/1‑151 (MQ=255) cccc‑ATTAATAAG‑CCAGGTTTTATCCCCTTT‑ATCC‑AAAC‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCtttt < 1:1160103/147‑1 (MQ=255) cGCC‑ATAAAAAAG‑CCGGTTTTTATCCCTTTT‑TTCC‑AAAC‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCtttttt < 2:413100/151‑1 (MQ=255) gCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCAATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTg > 2:241912/1‑151 (MQ=255) cgc‑ATTAAAAAA‑GCCGGTTTTTTCCCCTTTAATTC‑AAAT‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCtttttt < 1:86164/149‑1 (MQ=255) c‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTc > 1:999616/1‑151 (MQ=255) aataaG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCaaa > 2:700436/1‑150 (MQ=255) aagaG‑CCGGGTTTTTTCCCCCTT‑CTTC‑CCAATCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCaa < 2:143424/146‑1 (MQ=255) aG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGt > 2:50093/1‑151 (MQ=255) aG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGt > 1:334117/1‑151 (MQ=255) ccAGGTTTTTCCCCTTTT‑ATCC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTg < 2:78667/150‑1 (MQ=255) cAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTg > 1:1043660/1‑149 (MQ=255) aGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGc > 2:602612/1‑151 (MQ=255) | CCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC‑ATTAATAAG‑CCAGGTTTTATCACCTTT‑ATTC‑ACAA‑CCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGC > NC_000913/4537964‑4538249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |