| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,423,297 | 0 | G | C | 46.7% | 67.9 / 37.1 | 61 | intergenic (+103/+126) | yhdZ/rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| Reads supporting (aligned to +/- strand): ref base G (6/26); new base C (28/0); total (34/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.45e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTC > NC_000913/3423150‑3423445 | aaaTCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCgg < 1:705363/149‑1 (MQ=255) cAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGTCGTCCTTCCCTCCACCCTCCagggc > 1:302072/1‑146 (MQ=255) cAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCTCCcgg > 2:453129/1‑146 (MQ=255) agagCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGTCCCGCCCCCCCCCCCCCCGGCCGtt > 2:471851/1‑150 (MQ=255) gTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTc < 1:895179/150‑1 (MQ=255) gTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCCCCCGGCCGtt > 2:835005/1‑145 (MQ=255) gAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAc < 2:379305/151‑1 (MQ=255) ttATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCCCCCGCCCCCCCCCCGGCGGCTGCTTTCCAAAG‑ATCAAAAcc > 2:664164/1‑151 (MQ=255) aTCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCTCCCGGCCGTTGCTTCGCAAAG‑TTCAAATCCGc > 2:102047/1‑151 (MQ=255) aTCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCg < 1:847533/150‑1 (MQ=255) cGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGTCCCGCCCCCCCCCCCCCCGGCCGGTGCTTTGCCAAA‑TTTAAATTCGccc > 1:606486/1‑149 (MQ=255) cGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTc < 1:318813/151‑1 (MQ=255) cAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCCCCCGGCCGTTGCTTCGCAACG‑TTTAAAACCGCcccc > 2:786275/1‑151 (MQ=21) cAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCTCCCCCCCCCCCCCCGGCCGCTTCTTCTCAACG‑TTTAAATcccccccc > 1:365153/1‑151 (MQ=255) aGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCCCCCCCCCGGCCGGTGCTTCTCAAAG‑TTTCAATCCGCccccc > 2:207433/1‑150 (MQ=21) aaTCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCcggcgg < 2:833492/151‑1 (MQ=255) aTCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGTCCTGCCCGCCCCCCTCCCGGCCGTTGCTTTGCAAAC‑TTTAAAACCGCTccc > 1:434313/1‑145 (MQ=255) aTCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCTCCCCCCACCCCCCCGGCCGTTTCTTCGCAAAG‑TTCCAATTCCCTCCccgcgg > 2:131022/1‑150 (MQ=255) cATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGGCCTTCCCGCCCCCCCCCCGGCCGGTGCCTTGCAAAG‑TTCTAAAACCCCCCCCGCGGGttt > 1:240954/1‑151 (MQ=255) cATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCCCCCCCCCCGCCGGTGCTTTGCAACG‑TTTAAATCCCCCCCccgcggggtt > 2:587640/1‑147 (MQ=18) tAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCCCCCCCCCGGCCGGTGCTTCGCAACG‑TTCAAATCCCCTCCCCGCGGGGTTGt > 2:438875/1‑150 (MQ=18) ttGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGTCCTGCCCGCCACCCCCCCGGCCGTTGCTTCGCCCCC‑GTCCAATCCGCcccccccgccttttt > 1:17886/1‑136 (MQ=255) aTGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCCCCCCCCCCCCGGCCGTTGCTTTGCAAAG‑TTCAAATCCCCCCCCCGCGGGTTTTTCCT‑Ac > 2:879669/1‑148 (MQ=18) tAGTTCGAAAAGCAAAAAGGCCTTCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGga < 2:313469/150‑1 (MQ=255) aGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGgaga < 2:411006/151‑1 (MQ=255) tCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCACCCCCCCGGCCGGTGCTTCGCCACG‑TTCAAATCCGCCCCCCGCGGGGTTTTTCT‑TCTCGGGggag > 2:990242/1‑149 (MQ=17) cGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCGCCACCCCCCCGGCCCGTGCTTCTCCACA‑TTCAAATCCCCCCCCCGCGGGTTTTTCCT‑ACTCCGGagag > 2:127209/1‑148 (MQ=255) gAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTTCCCCCCCCCCCCCCGGGCGTTTCTTTCCAACC‑TTCAAATCCCCCCCCCCCCGACTTGTTCT‑ACTCggggggggggt > 1:930543/1‑143 (MQ=255) aGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTTCCCGCCACCCCCCCGGCCCTTTCTTTGCAACC‑TTTAAAACCCCCCCCCGCGGATTTTTGCT‑ACTCCGGCGAgtggt > 2:16429/1‑145 (MQ=17) gCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCCCCACCCCCCCGGCCGTTGCTTCGCCAAC‑TTCAAAACCGCCCCCCGCGGGTTTTTCCT‑TCTCGGGggaggggttacc > 2:691190/1‑142 (MQ=17) aaaaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTTCCCGCCACCCCCCCGGGCGTTGCTTCGCAACG‑TTCTAATCCCCCCCCCGCGGGTTTTTCCC‑CCTCGGGGGGgtggtttccgcc > 2:444220/1‑142 (MQ=255) aaaaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGCTTATGGCGGGCGTCCTGCCCCCCACCCCCCCGGCCGTTGCTTCGCAACG‑TTCAAAACCCCCCCCCGCGGGTTTTTCCT‑CCTCGGGAGAGGGTTCAcc > 2:782273/1‑148 (MQ=17) aaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGacaaa < 2:491331/151‑1 (MQ=255) aaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGacaaa < 1:27895/151‑1 (MQ=255) aaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGaaaaa < 1:87249/151‑1 (MQ=255) aGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGacaaac < 2:386816/151‑1 (MQ=255) ggCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGGGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTGCACCGacaaaca < 2:136001/151‑1 (MQ=255) gCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGGCCCGCCCGCCCCCCTCCGGGCCGGTGCTTCGCCAAC‑TTCCAAAACGCCGCCCGCGGATTTGTCCT‑TCCCGGGGGAGGGGTTACCGaccaa > 1:143488/1‑148 (MQ=255) ccATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTTCCCCCCCCCCCCCCGGCCGGTGCTTCGCAACG‑TTTAAATCCCCCCCCCGCGGGGTTTTCCT‑ACTCCGGAGAGGGTTCACCGacaaaa > 2:397806/1‑147 (MQ=14) ccATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAaacaac < 1:562891/151‑1 (MQ=255) ccTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGa < 2:115678/150‑1 (MQ=255) tttCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCCCCCGGCCGTTGGTTCGCAACG‑TTCAAATACGCCCCCCGCGGGGTTTTTCT‑ACTCGGGGGAGGGTTTACCCacaaacaaaa > 2:313276/1‑144 (MQ=14) ttCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑a < 1:561192/149‑1 (MQ=255) cTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGGCCTCCCCCCCCCCCCCCGGGCCGCTGCTTCGCAACC‑TTCAAATCCGCTCCCCGCGGGGTTTTTCT‑ACCCCGGGGAGGGTTTACCCACAAAAAAACGAa‑aaaaaaaaa > 1:817105/1‑147 (MQ=255) cTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTTCCCGCCCCCCCCCCGGGCGGTGCTTCTCAAAGTTTTAAATCC‑CTCCCCGGGGGGTTTTTCT‑ACTCGGGGGGGGGTTTACCGCCAAACAACAGaa‑aaaaaaaa > 1:624667/1‑146 (MQ=9) cTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCTCCCGCCACCCCCCCGGCCGTTGCTTCGCAACG‑TTCAAATCCCCCCCCCGCGGGGTTTTCCT‑ACTCCGGAGAGGGTTTACCGACAAACAACAGAT‑Aaaaaaaaa > 2:17373/1‑147 (MQ=14) tCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCa < 2:78787/150‑1 (MQ=255) tCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCa < 1:660179/150‑1 (MQ=255) cGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGt < 2:96992/151‑1 (MQ=40) gCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCTCCGGGCCCGTGGTTCGCAACG‑TTCAAATCCGCTCCCCGCGGGTTTTTTCT‑TCTCGGGGGGGGGTTCACCGACAAACAACAGAA‑AAAAAAAAAAGCCCAgcc > 1:988131/1‑149 (MQ=14) gatttgatGTCTGGCAGTTTATGGCGGGCGTGCCCCCCCCCCCCCCCCGCGCCGTTGTTTTTCAACG‑CTTCAATTCGCATCCTCCGGGCTTGCCCT‑AACCGGGCGAGCGGTGTACGACCAACCACAAATAAAAAAAAAAGGcccgac > 2:323857/1‑144 (MQ=255) ttgatGTCTGGCAGTTTATGGCGGGCGGCCTTCCCCCCCCCCCCCCGGCCGCTGCTTTGCAACC‑TTCCAATACGCGCCCCGCGCGTTTTTCCTAATTCGGGGGGGGTTCCCCCGCCAAAAACCAGA‑‑AAAACaaaaaagccacccctcc > 1:275862/1‑135 (MQ=255) tgatGTCTGGCAGTTTATGGCGGGCGTCCCGCCCCCCCCCCCCCCGGCCGGTGCTTCGCAACG‑TTCAAATTCCCTCCCCGCGGGGTTGTCCT‑ACTCCGGGGAGGGTTCACCCACAAACAACAAAT‑AAAACAAAAAGACCAGTCTTCCGa > 2:234424/1‑149 (MQ=11) gatGTCTGGCAGTTTATGGCGGGCGGCCCGCCCGCCCCCCCCCGGGCCGTTGCTTCCCAACG‑TTTAAAACCCCTCCCCGCGGGTTTGTCCT‑ACTCGGGAGAGTGGTTACCGACAAACAAAAAAT‑AAAAAAAAAAGCCCAGTCTTCCGAc > 2:435270/1‑149 (MQ=255) gTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGTCTTCCGACTGAg < 1:166185/150‑1 (MQ=38) ggCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGTCTTCCGACTGAGCCttt < 2:624772/151‑1 (MQ=35) tATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGtttt < 1:377421/150‑1 (MQ=38) gcgggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTg < 1:95094/151‑1 (MQ=38) ccTTCCCTCCACCCTCCTTGCCCTTGCTTCGCAACG‑TTCAAATCCACTCCCCACGGATTTATCCT‑ACTCTAAATAGTATTCACCGACAAACAACATAT‑AAAACAAAAAACCCATTCTTCCTACTTATCCTTTTCTTTTATTTTATTTCtcc < 1:302264/151‑3 (MQ=2) ccTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg < 1:24023/151‑1 (MQ=40) cTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg > 1:805530/1‑150 (MQ=40) ccACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTccc < 2:520647/151‑1 (MQ=40) cACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCt < 1:891961/151‑1 (MQ=40) ccGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACtctc < 2:960488/151‑1 (MQ=40) | AAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACG‑TTCAAATCCGCTCCCGGCGGATTTGTCCT‑ACTCGGGAGAGTGTTCACCGACAAACAACAGAT‑AAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTC > NC_000913/3423150‑3423445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |