New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1615598 =	67 (1.100)	3 (0.050)	3/286	11.3	4.8%	coding (795/882 nt)	yneJ	putative DNA‑binding transcriptional regulator
	?	NC_000913	= 1625301	54 (0.920)					intergenic (+10/+34)	ydeJ/dcp	inactive PncC family protein/dipeptidyl carboxypeptidase II
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

ATATAGTCATAAGTCATCGGAACATCACTATATAGAGCATATTAACCGCAAGAACTATCAAAAATAGCTCATTGATATCCCTGTCTTGCCGAGTCAGGCACATCCAGCAGTTGAATAAATGCCTCGAGCGGACGTGTTTTCGCACCACGACGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1615753‑1615598 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagGCCAGCCTGGTTATAGCAGTAATTGCAGCAGCTGGGCGAGGGCAAACCTCACCGCTAAAGCTAATACCGTTTCGCAGTCGCCAGCAAAATGCATAACCGCAGTGTAGTTCTGGCCTTTAATATGCCACGCAAACCAGACGGTACCC  <  NC_000913/1625301‑1625156                                                                                                                                                                                                                                                                                                                ATATAGTCATAAGTCATCGGAACATCACTATATAGAGCATATTAACCGCAAGAACTATCAAAAATAGCTCATTGATATCCCTGTCTTGCCGAGTCAGGCACATCCAGCAGTTGAATAAATGCCTCGAGCGGACGTGTTTTCGCACCACGAC                                                                                                                                                         <  2:820368/151‑1   ATAGTCATAAGTCATCGGAACATCACTATATAGAGCATATTAACCGCAAGAACTATCAAAAATAGCTCATTGATATCCCTGTCTTGCCGAGTCAGGCACATCCAGCAGTTGAATAAATGCCTCGAGCGGACGTGTTTTCGCACCACGACGC                                                                                                                                                       <  1:766846/151‑1   ATAGTCATAAGTCATCGGAACATCACTATATAGAGCATATTAACCGCAAGAACTATCAAAAATAGCTCATTGATATCCCTGTCTTGCCGAGTCAGGCACATCCAGCAGTTGAATAAATGCCTCGAGCGGACGTGTTTTCGCACCACGACGC                                                                                                                                                       >  1:791697/1‑151     AGTCATAAGTCATCGGAACATCACTATATAGAGCATATTAACCGCAAGAACTATCAAAAATAGCTCATTTATATCCCTGTCTTGCCGAGTCAGGCACATCCAGCAGTTGAATAAATGCCTCGAGCGGACTTGTTTTCGCACCACGACGCC                                                                                                                                                      <  2:739543/150‑1     AGTCATAAGTCATCGGAACATCACTATATAGAGCATATTAACCGCAAGAACTATCAAAAATAGCTCATTGATATCCCTGTCTTGCCGAGTCAGGCACATCCAGCAGTTGAATAAATGCCTCGAGCGGACGTGTTTTCGCACCACGACGCC                                                                                                                                                      >  1:917059/1‑150                       CATCACTATATAGAGCATATTAACCGCAAGAACTATCAAAAATAGCTCATTGATATCCCTGTCTTGCCGAGTCAGGCACATCCAGCAGTTGAATAAATGCCTCGAGCGGACGTGTTTTCGCACCACGACGCCAGGCCAGCCTGGTTATAGC                                                                                                                                   >  2:681998/1‑151                                                                                                        CCAGCAGTTGAATAAATGCCTCGAGCGGACGTGTTTTCGCACCACGACGCCAGGCCAGCCTGGTTATAGCAGTAATTGCAGCAGCTGGGCGAGGGCAAACCTCACCGCTAAAGCTAATACCGTTTCGCAGTCGCCAGCAAAATGCATAACC                                                  <  1:925939/151‑1                                                                                                                     AAATGCCTCGAGCGGACGTGTTTTCGCACCACGACGCCAGGCCAGCCTGGTTATAGCAGTAATTGCAGCAGCTGGGCGAGGGCAAACCTCACCGCTAAAGCTAATACCGTTTCGCAGTCGCCAGCAAAATGCATAACCGCAGTGTAGTTCT                                     <  2:141941/151‑1                                                                                                                                                        GCCAGGCCAGCCTGGTTATAGCAGTAATTGCAGCAGCTGGGCGAGGGCAAACCTCACCGCTAAAGCTAATACCGTTTCGCAGTCGCCAGCAAAATGCATAACCGCAGTGTAGTTCTGGCCTTTAATATGCCACGCAAACCAGACGGTACCC  >  1:195737/1‑151                                                                                                                                                        GCCAGGCCAGCCTGGTTATAGCAGTAATTGCAGCAGCTGGGCGAGGGCAAACCTCACCGCTAAAGCTAATACCGTTTCGCAGTCGCCAGCAAAATGCATAACCGCAGTGTAGTTCTGGCCTTTAATATGCCACGCAAACCAGACGGTACCC  <  2:627169/151‑1                                                                                                                                                                                                                                                                                                                ATATAGTCATAAGTCATCGGAACATCACTATATAGAGCATATTAACCGCAAGAACTATCAAAAATAGCTCATTGATATCCCTGTCTTGCCGAGTCAGGCACATCCAGCAGTTGAATAAATGCCTCGAGCGGACGTGTTTTCGCACCACGACGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1615753‑1615598 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagGCCAGCCTGGTTATAGCAGTAATTGCAGCAGCTGGGCGAGGGCAAACCTCACCGCTAAAGCTAATACCGTTTCGCAGTCGCCAGCAAAATGCATAACCGCAGTGTAGTTCTGGCCTTTAATATGCCACGCAAACCAGACGGTACCC  <  NC_000913/1625301‑1625156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.