| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 213,341 | 0 | A | G | 42.0% | 119.9 / 25.3 | 81 | G337G (GGA→GGG) | tilS | tRNA(Ile)‑lysidine synthetase |
| Reads supporting (aligned to +/- strand): ref base A (9/38); new base G (34/0); total (43/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.71e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTG > NC_000913/213192‑213488 | gATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGaa < 2:97543/151‑1 (MQ=255) ccTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGAAg > 1:964015/1‑148 (MQ=255) ccTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAgtgt < 2:495566/151‑1 (MQ=255) cACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTa < 1:681513/149‑1 (MQ=255) cACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACa < 1:1020241/151‑1 (MQ=255) cccTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGc < 1:240180/151‑1 (MQ=255) ccTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCt < 2:703858/151‑1 (MQ=255) cTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGGGTAGCGCtt > 2:122249/1‑151 (MQ=255) gTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAgaggtgagctt > 1:1101953/1‑139 (MQ=255) gTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTaa < 1:761515/151‑1 (MQ=255) tACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGTGTACAGCTTAAAGc > 2:374300/1‑151 (MQ=255) cGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGGACAGCTTAATGCgg > 1:774888/1‑151 (MQ=255) gTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGGGTACAGCTTAATGCggg > 1:3255/1‑151 (MQ=255) tGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGGGGACAggctaaaggggg > 1:941026/1‑137 (MQ=255) cgTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGatat < 2:399945/151‑1 (MQ=255) gTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTTAAGCTTAATGCgggggggggaatt > 2:526346/1‑144 (MQ=255) gTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCATCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGAGGACAGCTTAATTAGGGGGGCGag > 2:950222/1‑147 (MQ=255) ttGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTc < 2:329223/150‑1 (MQ=255) aTCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGGACAGCTTAATGCGGGGGGGGGTATTCGCCCTc > 1:738665/1‑151 (MQ=255) aTCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCGGGGGAGTGTGAAGCATAATGGGGGGGGCGATAttttccc > 2:960467/1‑144 (MQ=255) ccGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTACAGCTTAAAGCGGGGGGGGATATTCGcccccc > 1:235450/1‑150 (MQ=255) cGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGTAAAGCTTAATTCGGGGGGCGATATTCGCCCTcc > 1:821494/1‑149 (MQ=255) gACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCGGGGAAGGGGACAGCCTAAAGTGGGGGGGGAGATTTGCCCTcc > 2:106294/1‑148 (MQ=255) aCGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGTGTACAGCTTAATGCGGGGGGCGATATTCGCCCTCcgc > 1:1051871/1‑149 (MQ=255) aCGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTGCAGCTTAATGCGGGAGGCGGTATTTGcccccc > 2:411054/1‑147 (MQ=255) tATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCCGGGGAGGGGACAGCTTAATTCGGGGGGGGATATTTGCCCCCCCCGTg > 1:698572/1‑148 (MQ=255) tCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGTGTACAGCTTAATGCGGGGGGGGATATTTGCCCTcc > 1:1083269/1‑141 (MQ=255) tCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTACAGCTTAATGCGGGGGGCGGTATTCGCCCTCcgc > 1:1165469/1‑143 (MQ=255) cAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACg < 2:1145768/151‑1 (MQ=255) gTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGaa < 1:1171306/151‑1 (MQ=255) tCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGAGTACAGCTTAATGCGGGGGGCGATATTCGCCCCCCGCGCGCAG‑ACg > 2:369191/1‑148 (MQ=255) gCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCGGGGGGGTGTAAAGATTTATTCTGGGGGCGGTATTCGCCCTCCGCGGGc > 1:533398/1‑141 (MQ=255) aaCTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGt < 2:398374/151‑1 (MQ=255) aaCTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGt < 1:1075459/151‑1 (MQ=255) aCTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTc < 2:938204/151‑1 (MQ=255) gtggtgGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGTAAAGGTTAATTCGGGGGGCGGTTTTCGCCCTCCGCGTGCAG‑ACGAAG‑GGGTCAgc > 2:351482/1‑151 (MQ=255) gtggtgGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAgc < 2:442920/151‑1 (MQ=255) ggATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGTAACGCTTTAAGCGGGGGGGGGTATTTGGCCCCCCCGCGCAg‑aagaaagggttaggggg > 1:89331/1‑137 (MQ=255) aTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAATGGACAACTTAATGCGGGGGGCGATATTCGCCCTCCCCGGGCAG‑ACGCAG‑CGGGGAGCGGGCGTTTCaa > 1:736338/1‑150 (MQ=255) aTCCGTCACCGGGCAAAGCGAAAACATTGGGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCaaa < 2:1103628/151‑1 (MQ=255) ccGTCCCCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACGGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAg < 2:589025/150‑1 (MQ=255) cACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGTGTTCAGCCTCATGCGGGAGGGCGCATTCGCCCTCCCCGGGCAG‑ACGGAG‑CGGGCAGCGTGCGTTTTAAAGCGcc > 2:932142/1‑150 (MQ=255) cACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCa < 2:1100171/151‑1 (MQ=255) gggCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGTGTAAAGCTTAAAAGGGGAGGCGATATTTGCCCTCCGCGAGGAA‑ACAAAA‑CGGTCAGCGTGCGGTTTAAAgcgc > 1:356951/1‑145 (MQ=255) cAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGGGGGGGGGGTGCAGCTTCAAGCGGGGGGGGGTATTCTCCCCCCGCGGGCAG‑CAGACG‑CGGTGAGCGGGCGGTTCTAAacggccgg > 2:827117/1‑141 (MQ=255) aaaGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGTACAGCTTAATGCGGGGGGGGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGGCAGCGGGCGTTTCAAAACGCCCGGAtt > 1:734269/1‑148 (MQ=255) cGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGTGTACAGCTTAATTCGGGGGGGGATATTTGCCCCCCCCCTGCAG‑ACGAAG‑CGGTCAGCGTGGGTTTTCAAGCGCCCGGATttctgc > 1:33826/1‑149 (MQ=255) cGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGGACAGCTTAATGCGGGAGGGGAAATTTGCCCTCCCCGTGCAG‑ACGAAG‑CGGGCAGCGTGCGGTTCAAAGCGCCAGGATtgctg > 1:58936/1‑148 (MQ=255) cGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTACAGCTTAAAGCGGGGGGCGAAATTCGCCCTCCGCGGGCAG‑ACGAAA‑CGGGCAGCGGGCGGTTTAAAACGCCCGGAtt > 1:297573/1‑144 (MQ=255) aaaaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTAAAGCTTAATGCGGGAGGCGGTATTTGCCCCCCGCGTGCAG‑ACGAAG‑CGGGCAGCGGGCGTTTTAAAGGGCCAGGGTTGCTGGat > 1:412246/1‑149 (MQ=255) aCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGCGGGGAGTGGACAGCCTTATGCGGGGGGCGGCATTTGCCCCCCGCCGGGAGAACGAA‑‑CGGGCGGCGGGGGGTTTAAAGCGCCCGGATttctgcctct > 2:39933/1‑144 (MQ=255) cATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTc < 2:392486/151‑1 (MQ=255) aTTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGGGTACAGCTTAATGCGGGGGGGGGTATTTGCCCCCCGCGTGCAG‑ACGAAA‑CGGGCAGCGGGCGGTTTAAAACGCCCGGATTGCTGCATAtt > 1:494795/1‑147 (MQ=255) aTTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAA‑CGGGCAGCGTGCGGTTCAAAACGCCAGGAATGCTGCATATTGt > 1:943015/1‑149 (MQ=255) aTTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCg < 2:560996/151‑1 (MQ=255) aTTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCg < 1:274458/151‑1 (MQ=255) tgtgCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCgg < 2:54392/150‑1 (MQ=255) tgtgCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCgg < 1:868645/150‑1 (MQ=255) gtgCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCggg < 1:324803/150‑1 (MQ=255) cGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAGGGGAAAGCTTAATGCGGGAGGCGGTATTTGCCCCCCGCGTGCAG‑ACGAAG‑CGGTCAGCGGGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTa > 1:1074219/1‑150 (MQ=255) gTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGTGGGGAGAGTAACGATTAATACGGGGGGGGATATTTGGCCCCCGCGTGCAG‑ACGAAG‑CGGGCAGGGGGGGGTTCAAAGCGCCCGGGGTGGTGCACATTGTCggggg > 2:25324/1‑145 (MQ=255) ggCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAAcg < 1:747683/150‑1 (MQ=255) gCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAAcggc < 1:526487/151‑1 (MQ=255) cAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGAGTACCGCTTAATGCGGGAGGCGATATTCTCCCTCCCCGGGCAG‑ACGAAA‑CGGGCTGCGTGGGTTTCAAAGCGCCAGGATTGGTGCATATTGTTGGGC‑GTGAaggcg > 1:632778/1‑151 (MQ=255) cAGACGTGGCTGCAACCGCTGGAAGTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGGGGCGTTATTCGCCCTCCGCGGGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAAcggc < 2:756493/150‑1 (MQ=255) aCGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGa < 1:522588/150‑1 (MQ=255) aCGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGAc < 2:1091384/151‑1 (MQ=255) aCGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGAc < 1:960733/151‑1 (MQ=255) cGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACg < 1:703552/151‑1 (MQ=255) gTGGCTTCAACCGCTGGAATTACCGGCGGGGGCGGGGAGTGGAACCACTAATTCGGGGGGCGATAATCGCCCCCCGCGTGGAA‑GAGAAGACGGT‑ACCGGGGGGTTCTAAGGGGCAGGATTACTGGCTTTTTTCGGGCGGTAAcgggggcg > 2:250945/1‑148 (MQ=255) ttCAACCGCTGGAATTACCGGCGGGGCTGGGGAGTGTACAGCTTAAATCTGGGGGGGAAATTTGCCCCCCCCATGCAG‑ACGAAG‑CGGTGAGGGGGCGTTTCAAAGTGCCACGGATGCTGCATATTTTTGGGG‑GGAACGGCGGGCGTAAgg > 1:679936/1‑149 (MQ=255) tCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACGTAAGCt < 2:52939/150‑1 (MQ=255) cAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACGTAAGCTaa < 2:744887/151‑1 (MQ=255) ccGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACGTAAGCTAAAGa < 1:913267/151‑1 (MQ=255) ccGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAAGGCGGGGGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGGCGGGC‑GTAACGGCGGACGTAAGCTAAAg < 2:709951/150‑1 (MQ=255) cTGGAATTACCGGCGGGGCTGGGGAGTGTTCCGGCTAATGCGGGGGGGGATATTTCCCCCCCGCGTGGCG‑ACGAAA‑CGGGCAGCGTGCGTTTTCAAGCGCCAGGGTTGCTGCATATTGTCGGGC‑GGAAAGGGGGGCGGAAAATAaaaaaa > 1:148721/1‑150 (MQ=255) ggAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACGTAAGCTAAAGAAAAt < 2:746906/150‑1 (MQ=255) ccGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACGTAAGCTAAAGAAAATCTGGCaa < 1:798420/150‑1 (MQ=255) ggcggGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAagag < 1:5543/151‑1 (MQ=255) tGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCg > 1:545051/1‑150 (MQ=255) tGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGt > 1:451289/1‑151 (MQ=255) gggAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTg < 2:820026/151‑1 (MQ=255) | GATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAG‑ACGAAG‑CGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGC‑GTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTG > NC_000913/213192‑213488 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |