| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,376,349 | 0 | A | C | 39.2% | 130.2 / 16.1 | 81 | T106P (ACC→CCC) | ycjR | putative TIM alpha/beta barrel enzyme |
| Reads supporting (aligned to +/- strand): ref base A (36/12); new base C (0/31); total (36/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.62e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCACCGCCTGCGGTGGCTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTATCTCGAACCGTTAAACCGCTATC > NC_000913/1376200‑1376487 | ccaccGCCTGCGGTGGCTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTAc > 2:212081/1‑151 (MQ=255) ccGCCTGCGGTGGCTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCtt > 1:787751/1‑151 (MQ=255) gCCTGCGGTGGCTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTcc < 1:156790/151‑1 (MQ=255) ccTGCGGTGGCTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTGCCTTCCg < 2:384954/151‑1 (MQ=255) ggTGGCTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTAc > 1:7916/1‑151 (MQ=255) gTGGCTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGAAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTAcc > 1:1163609/1‑151 (MQ=255) cTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTAccgccg > 1:970356/1‑151 (MQ=255) cTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGCGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTAccgccg > 1:1203089/1‑151 (MQ=255) gACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATTTTTACCTTCCGCTTACCGCCGATg < 1:676151/150‑1 (MQ=255) cGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGAcc > 2:1123270/1‑151 (MQ=255) ggatggatGGGCGGCTTTAGGGAGGAGCGTCGTCTTAATGGCTTAAAGCAGAGCGGGCGCATTCGCGAAGGGGTGGGAGAAGTGGGGGGTAAAGGCATCGTG‑TGCCCGGGTGGGTGGGGGATGTTTCCCTGCGGGTTGCCGCCGATGACCt < 2:204525/151‑1 (MQ=255) tggatTGGCGTTTTTATCGAGGAGCGTCGTTTTAATGCCTTAAAGCAGATCGGCCGCATTCTCGAAGCGCTGGAGGAGGTGGGGGGTAAGGCCATCTTC‑GTTCCGGCTGCGGGGGGAATGTTTACCTTCCGCTTACCGCCGATGACCTcg < 2:805228/150‑1 (MQ=255) tggatTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTcgc > 2:836475/1‑151 (MQ=255) ggatTGGCGGTTTTATCGAAGGGCGTCGTTTTAATGGCTAAAAGCAGATCGAGCGCATTCACGAAGGGCGGACAGAGGGGGGCGGTAAGGGCATCGCC‑GTTCGGGCTGGGTGGGGCATGTTTACCTTCCCCTTCCCGCCGATGACCTcg < 2:903357/149‑1 (MQ=255) ggCGACTTTATCGAAGAGCGTCGTCTTAATGGTTAAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTa < 1:1151925/151‑1 (MQ=255) gACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGcc > 1:380083/1‑151 (MQ=255) gACTTTATCGAAGAGCGTCGTCTAAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGc < 1:387860/150‑1 (MQ=255) tttATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTgg > 1:356368/1‑151 (MQ=255) ttATCGAAGGGCCTCGTCTTAATGGTTTAACGCAGTCCGCCCCCCTCCTCGAGGCCATGCAAAACGTGGCAGGTAAAGGCAGCCTC‑TTCCCGGTTGCGTGGGGATTTTTTACTTCCCGTTTACCGCCGATGACCTCGCCGCGTAGCCt < 2:164009/148‑1 (MQ=255) ttATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTgg > 2:645454/1‑150 (MQ=255) aTCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACg > 1:806675/1‑151 (MQ=255) aTCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACg > 1:1087477/1‑151 (MQ=255) aTCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCGGGCAGAGGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGAc < 1:223626/150‑1 (MQ=255) ccGAAGGGCGCCTTCTTAAGGGCTAAAAGCAGATGGGGCGCATTCCCGAGGCGTTGGCAGAAGTGGGCGAAAAGGCCTTCGTC‑GTCCCGCCTGCGTGGGGCATTTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGAc < 2:348353/148‑1 (MQ=255) gAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCg > 1:648967/1‑151 (MQ=255) gAAGAGCGTCGTCTTAATGGCTAAAAGCAGATCGAGCGCTTTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTCCCTCCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGa < 1:96438/146‑1 (MQ=255) aaGGGCGGCGTCTTAATGGCTGAAAGAAGATCGCGCGCATTCTGGAAGCGCGGGCAGAAGTGGGCGGTAAGGGCACCGTC‑GTTCCGGCTGCGTGGGGATGGTTTCCCTCCCGCTTCCCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGa < 2:1163511/151‑1 (MQ=255) aaGAGCGTCGTCTTAATGGCTTAAAGAAGATCGAGCGCTTTCTCGAAGGGCGGGCAGAAGTGGGCGGAAAGGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACg < 2:490732/147‑1 (MQ=255) gCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGc > 1:889687/1‑151 (MQ=255) gCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGc > 1:1172606/1‑151 (MQ=255) cgtcgtcgtAATGGCTTAAAGCAGATCGAGCGAATTCTCGAAGCGCTGGCAGAAGTGGGAGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGATTACCTTCCGCTTACCGCCGATCGCCTCGCCGCGGAGCCTGGACGGCGAcc > 2:437049/1‑148 (MQ=255) gtcgtcTTAAGGGCTAAAGGAAGATCGGGCGCTTCCTCGAAGCGCTGGCAGAAGGGGGCGGAAAGGGCATCGTC‑GTCCGGGTTGGGTGGGGCATGTTTCCCTCCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGAcc < 2:897146/147‑1 (MQ=255) gtcTTAATGGCTAAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCaaaa < 1:886792/150‑1 (MQ=255) aTGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGgtg > 2:1082435/1‑149 (MQ=255) tGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGgtgagt > 1:653137/1‑151 (MQ=255) ttAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGAtt > 2:367235/1‑151 (MQ=255) tAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTc > 1:733598/1‑151 (MQ=255) aaaGCAGGCCGCGCGTTTTCGCGAAGCGCGGGCAGAAGTGGGCGGTAAAGACCTCGTC‑GTTCCGGCTGCGGGGGGCATTTTTCCTTCCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGAt < 2:437386/148‑1 (MQ=255) aaaGCAGCTCGAGCGCATTCTCGAAGCGCTGGAAGAAGTGGGCGGTAAGGGCATCGTC‑GTTCCGGCTGCGGGGGGTTTGTTTCCCTTCCCCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGgtgagtga < 1:90054/147‑1 (MQ=255) aaaGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGGGGGGGGCATGTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGAtt < 2:877646/149‑1 (MQ=255) aaGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTccc > 1:885073/1‑151 (MQ=255) aGATCGGGCGCATTCTCGGAGCGCTGGCAGAGGGGGGCGTTAAGGGCTTCGTC‑TTTCCGGCTGTGTGGGGATTGTTTCCCTCCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCt < 2:196690/148‑1 (MQ=255) aGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGAAAAGGCATCGTC‑GTCCCGGCTGCGTGGGGCATGTTTACCTCCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTgcg < 2:180351/151‑1 (MQ=255) gagcgggcgcATTCTCGAGGCGCGGGCAGAAGTGGGCGGTAAAGGCATCTTC‑GTTCGGGCTGCGTGGGGCATGTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTgcg < 2:1182075/144‑1 (MQ=255) acggccgtaTTCTCAAAGCGCTGGCTGAAGTGGG‑GGAAAATGGTGGTTCAGTTCGGCAGGCGTGGGAAATTTTTCCCTACGATTTGCCGCCGATGGCCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGcgcg < 1:1111595/142‑1 (MQ=255) gAGCGCATTCTCGAGGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑TTCCCGGCTGCGTGGGGCATGTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGt < 2:69643/149‑1 (MQ=255) gAGCGCATTCCCGAAGCGCTGGAAGAAGTGGGCGGTAAAGGCACCGTC‑GTTCCGGCTGCGTGGGGCATTTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGt < 1:572949/149‑1 (MQ=255) aGCGCATTCTCGAGGGCTTGGCAGAGTTGGGCGATAAAGGCATCGTC‑GTTCGGGTTGCGGGGGAAGTGTTTCCCTCCCGTTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTa < 2:476209/149‑1 (MQ=255) aGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACt > 1:570179/1‑151 (MQ=255) aGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTCCGTGGGGCATGTTTACCTTCCGATTACCGCCGACGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGCGAGTGATTCCCTGCGCGTAc > 1:357252/1‑150 (MQ=255) acATTCTCAAAGCGTTGGAAGAAGTGGGCGGAAAAGGCATCGTC‑TTCCCGGCTGCGGGGGGCATTTTTTCCTTCCGTTTCCCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGa < 1:400237/150‑1 (MQ=255) tctcGAAGCGCTGGCAGAGGTGGGCGGTAAAGGCATCGGC‑GTTCCGGCGGGGTGGGGCATTTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACa < 2:325483/150‑1 (MQ=255) tctcGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAAc > 1:1179100/1‑149 (MQ=255) tcGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAgg > 1:800642/1‑150 (MQ=255) tcGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAgg > 2:215094/1‑150 (MQ=255) gaggcgcTGGCAGAAGTGGGGGGTAAAGCCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGt < 1:687988/146‑1 (MQ=255) gAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTcg > 1:1063085/1‑151 (MQ=255) ggaagaggggggTGGTAAAGGCACGGTC‑TTTCCGGCTGCGTGAGCCATTTTTCCCTCCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTcgccg < 1:567315/137‑1 (MQ=255) ggCAGAAGGGGGCGGAAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTCCCTTCCGTTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGt < 1:907969/151‑1 (MQ=255) gAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCg > 1:1138586/1‑151 (MQ=255) gAAGTGGGCGGTAAAGGCATCGTC‑GTCCCGGCGGCGGGGGGCATGTTTCCCTTCCGTTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTa < 1:564808/148‑1 (MQ=255) aGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCgg > 2:265137/1‑150 (MQ=255) gTGGGCGGTAAGGGCATCGTC‑GTTCCGGCGGCGTGGGGCATGTTTCCCTCCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGaa < 2:866933/151‑1 (MQ=255) ggCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCg < 1:902274/151‑1 (MQ=255) ggCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCg < 1:811920/151‑1 (MQ=255) ggggTAAGGGCTTCGTC‑GTCCCGGCGGCGTGGGGCTTTTTTCCCTCCCGGTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCgt < 2:112992/149‑1 (MQ=255) gCGGTAAAGGCATCGTC‑TTTCCGGCTGGGTGGGGCATTTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCgt < 1:229116/151‑1 (MQ=255) aaaGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCgtggtg < 2:1087424/150‑1 (MQ=255) aaaGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGgtgt > 1:416552/1‑151 (MQ=255) aaGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGCACCGTGgtgt > 2:946788/1‑150 (MQ=255) aaGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGgtgt > 1:46694/1‑150 (MQ=255) ggcttcgccttccgggCTGCGTGGGGCATGTTTCCCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTAt < 1:851021/136‑1 (MQ=255) caccgtc‑gtCCCGGCTGCGTGGGGCATGTTTCCCTTCCCCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTAtct < 2:363179/147‑1 (MQ=255) accgtggtccgggCTGGGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTAtct < 2:1061549/138‑1 (MQ=255) cgtc‑gtTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTATCTCGa > 2:997686/1‑150 (MQ=255) gtc‑gtTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTATCTCGAAc > 1:442123/1‑151 (MQ=255) ccggtggCGTGGGGTATGTTTCCCTCCCCTTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTATCTCGAACCGtt < 2:1169598/143‑1 (MQ=255) ggCTGCGTGGGGCATGTTTCCTTCCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTATCTCg < 2:1087532/140‑1 (MQ=255) gCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTATCTCGAACCGTTAAAcc > 2:1253886/1‑151 (MQ=255) ggggCATTTTTCCCTCCCGCTTCCCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTATCTCGAACCGTTAAACCGCTAt < 2:187010/149‑1 (MQ=255) ggggAATTTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTATCTCGAACCGTTAAACCGCTATc < 1:1934/150‑1 (MQ=255) | CCACCGCCTGCGGTGGCTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTC‑GTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTATCTCGAACCGTTAAACCGCTATC > NC_000913/1376200‑1376487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |