Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,101,507	0	T	G	41.8%	127.2 / 12.7	80	intergenic (+77/‑183)	sodA/kdgT	superoxide dismutase, Mn/2‑keto‑3‑deoxy‑D‑gluconate transporter
Reads supporting (aligned to +/- strand):  ref base T (6/40);  new base G (33/0);  total (40/40)
Fisher's exact test for biased strand distribution p-value = 1.74e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCA  >  NC_000913/4101359‑4101655                                                                                                                                                     |                                                                                                                                                      gACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGttt                                                                                                                                                     <  2:545342/151‑1 (MQ=255) gACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGCGGgtt                                                                                                                                                     >  2:490363/1‑151 (MQ=255)  aCTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGtttt                                                                                                                                                    <  1:920996/151‑1 (MQ=255)     aCATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGttttttt                                                                                                                                                 <  2:33471/151‑1 (MQ=255)     aCATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGgtttttt                                                                                                                                                 >  1:379663/1‑151 (MQ=255)     aCATGAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGttttt                                                                                                                                                   <  1:988714/149‑1 (MQ=255)      cATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTtg                                                                                                                                                <  2:875063/151‑1 (MQ=255)        ttAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGgtttttttt                                                                                                                                               >  1:279408/1‑148 (MQ=255)         tAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTTGgtttttt                                                                                                                                                 >  1:1026872/1‑147 (MQ=255)         tAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTtgtg                                                                                                                                              <  2:953867/150‑1 (MQ=255)          aaaGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGAt                                                                                                                                            <  1:268206/151‑1 (MQ=255)            agagTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑a                                                                                                                                         <  1:172721/151‑1 (MQ=255)                ttCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AAtt                                                                                                                                      <  1:97478/150‑1 (MQ=255)                    ggAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTc                                                                                                                                    <  1:915530/148‑1 (MQ=255)                    ggAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTc                                                                                                                                    <  2:981419/148‑1 (MQ=255)                    ggAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCaaa                                                                                                                                 <  1:552792/151‑1 (MQ=255)                    ggAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATC‑AAATTTaa                                                                                                                                  >  2:453827/1‑150 (MQ=255)                       aCGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATa                                                                                                                              <  1:88174/151‑1 (MQ=255)                       aCGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTTGTC‑AATTTTaaaa                                                                                                                                >  1:171021/1‑149 (MQ=255)                        cGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATaa                                                                                                                             <  2:623001/151‑1 (MQ=255)                         gtggtgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTAAAAATaaa                                                                                                                            <  1:585339/151‑1 (MQ=255)                            gtgAACTGGGACGAAGCAGCGGCACGTTAAACAAAAAAAAAAAAATAAAATAAAGAATGAAGCAATGAGGAGAATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGATC‑AAATTTAAAATaaaaa                                                                                                                          >  1:814100/1‑150 (MQ=255)                            gtgAACTGGGACGAAACAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGAGTACAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGAGGTTTTTTTTTGTGT‑AATTTCCAaaaaaaaa                                                                                                                          >  1:374862/1‑150 (MQ=255)                             tgAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGCGGGTTTTTTTTGTTCAAATTTTAAAATaa                                                                                                                             >  1:691647/1‑147 (MQ=255)                               aaCTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATT‑AATTTTTAAATaaaaaaaa                                                                                                                       >  2:552964/1‑150 (MQ=255)                                aCTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATg                                                                                                                     <  1:425387/151‑1 (MQ=255)                                aCTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATg                                                                                                                     <  1:1045549/151‑1 (MQ=255)                                  tGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTTGATT‑AATTTCAAAATaaaaaaaaata                                                                                                                    >  1:3101/1‑147 (MQ=255)                                   gggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGa                                                                                                                    <  2:605255/149‑1 (MQ=255)                                   gggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATc                                                                                                                  <  2:478346/151‑1 (MQ=255)                                   gggACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGACGCCTGCTGCAATGAGGCGTATAGGCCTCATATCAGCTTAAAAAATGAACCATAGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAACAAAAACAATGTTc                                                                                                                  <  1:261213/151‑1 (MQ=255)                                      aCGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGGTC‑AATTTTAAAATAAAAACAATGGTc                                                                                                                  >  2:301529/1‑148 (MQ=255)                                       cGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATC‑AATTTTAAAATAAAAAAAAAGATcc                                                                                                                 >  2:87256/1‑148 (MQ=255)                                        gAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGata                                                                                                             <  2:47580/151‑1 (MQ=255)                                          agcagcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGataaa                                                                                                           <  1:616049/151‑1 (MQ=255)                                            catcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGACTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGataaaaa                                                                                                         <  1:752326/148‑1 (MQ=255)                                              gcGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGGTT‑AAGTTTAAAATAAAAACAAAGATCCGataaaaa                                                                                                         >  2:642718/1‑149 (MQ=255)                                                 gCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGataaaaataaa                                                                                                     <  1:1119362/150‑1 (MQ=255)                                                  cACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAAc                                                                                                   <  1:213394/151‑1 (MQ=255)                                                   aCGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAAc                                                                                                   >  2:505395/1‑150 (MQ=255)                                                     gTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGc                                                                                                <  2:190908/151‑1 (MQ=255)                                                         tGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGATT‑AATTTTAAAAAAAAAAAAATAATCCGATAAAAAAAAAAAAACGttt                                                                                            >  1:553161/1‑151 (MQ=255)                                                          gcggcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGATC‑AATTTTAAAAAAAAAAAAAAGATCCGATAAAAAAAAAAAAACGttt                                                                                            >  1:178670/1‑150 (MQ=255)                                                          gcggcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCACCTTAAAAAATGAACCATCGCCAACGGCGGAGGGTTTTTTGTGGCT‑AATATCAAAGAAAAAAAAATTACCCGGCAAAAAAAAAACAggcgtt                                                                                            >  1:95774/1‑145 (MQ=255)                                                           cggcgAAAAAAGAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGAGCCGATAAAAATAAAACAGCGTTTCa                                                                                          <  2:174460/151‑1 (MQ=255)                                                            ggcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGGTC‑AATTTTAAAATAAAAAAAAAGATCCGATAAAAATAAAAAAACGGTTCa                                                                                          >  1:464624/1‑150 (MQ=255)                                                              cgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATC‑AATTTTAAAATAAAAAAAATGATCCGATAAAAATAAAACAGCGTTTCAAtt                                                                                       >  2:504014/1‑151 (MQ=255)                                                               gAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAAtt                                                                                       <  1:626606/150‑1 (MQ=255)                                                                  aaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGGTT‑AATTTTAAAATAAAAACAAAGATCCGgtaaaaaaaaaaaaaccgtttaatt                                                                                       >  2:387327/1‑134 (MQ=255)                                                                  aaaaTAATCATTTGCCGCCTGCCGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGCGGGTTTTTTGTGGGG‑TATTTTAAAAAAAAAACAAATATCCGATAAAAAAAAAAAAGCgggtttaatgatg                                                                                   >  1:524186/1‑139 (MQ=255)                                                                             ttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGTTC‑AATTTTTAAAAAAAAACAAAGAACCGGTAAAAAAAAAACAACGGTTTTATTTATTTGGgttttgtt                                                                        >  1:1068601/1‑147 (MQ=255)                                                                             ttGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGATC‑AATTTTTAAATAAAAAGAATGATTCGTTAAAAATAAAACAACGTTTCAATTTGTGTGGTTTTTAt                                                                         >  2:845642/1‑150 (MQ=255)                                                                              tGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATC‑AATTTCAAAATAAAAAAAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGGTTTGAt                                                                         >  2:588672/1‑149 (MQ=255)                                                                              tGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATC‑AAATTTAAAAAAAAAAAAAAGATCCGATAAAAATAAAACACCGTTTCAATTGATGTGGtttt                                                                            >  2:834380/1‑146 (MQ=255)                                                                                  gccTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGGGC‑AAATTTAAAATAAAAAAAAAGATTCGATAAAAAAAAAACAGCGTTTTAATTTATGTGGGTTTGATTACttt                                                                   >  2:195416/1‑151 (MQ=255)                                                                                    ctgctgCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTTTGGTT‑AAATTCAAAATAAAAACAAAAATCCGATAAAAATAAAAAAGCGTTTCAATTTATGTGGGTTTGATTACttttt                                                                 >  2:996347/1‑150 (MQ=255)                                                                                      gctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTAtt                                                               <  1:1118308/151‑1 (MQ=255)                                                                                      gctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTAtt                                                               <  1:463647/151‑1 (MQ=255)                                                                                      gctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTAtt                                                               <  1:528810/151‑1 (MQ=255)                                                                                        tgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTTTGGTC‑AATTTTAAAATAAAAAAAAAAAACCGCAAAAAATAAAAAAACGTTTCTATTTATGGGGgtttttttccttttttt                                                               >  1:923042/1‑136 (MQ=255)                                                                                         gcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAGTGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTg                                                              <  1:541857/149‑1 (MQ=255)                                                                                         gcAATGAGGCGTATAGGCCGCATATAAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGCTTTTTTTTGGTT‑AATTTTCAAATAAAAAAAATGATTCGTTAAAAATAAAACCGCGGTTCTATTTATGTGGTTTTTTACACTtttttt                                                               >  2:224757/1‑148 (MQ=255)                                                                                            aTGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGGGGGTTTTTTTTGGTG‑AAATTCACAAAAAAAAAAAAGAACCGCTCAAAATAAAAAAGCGGTTTAATTTTTGTGGGTTTTTTTACTtttttt                                                               >  1:1167332/1‑145 (MQ=255)                                                                                              gAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATC‑AAATTCAAAAAAAAAACAAAGAACCGATAAAAATAAAAAAGCGTTTCCATTTAGGTGGGTTTTTTCACTTTTTTTGATTaaa                                                        >  1:780445/1‑150 (MQ=255)                                                                                               aGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatg                                                      <  2:562858/151‑1 (MQ=255)                                                                                                ggCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaatga                                                     <  2:1206483/151‑1 (MQ=255)                                                                                                ggCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAaat                                                       <  1:674045/149‑1 (MQ=255)                                                                                                 gCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATC‑AATTTTAAAATAAAAACAATGATCCGATAAAAATAAAAAAGCGTTTTCATTTATGTGGTTTTTTTCACTTTTATTGATTaaa                                                        >  2:408521/1‑147 (MQ=255)                                                                                                  cGTATAGGGCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGCTCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCTCTATTATTGATTAaatgaat                                                   <  1:791067/151‑1 (MQ=255)                                                                                                   gTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGAGGGTTTTTTTTTATG‑AATTTTAAAATAAAAAAAAAGATCCGGTACAAATAAAAAACAGTTTCAATTGTTGTGGGTTTTATCACTtttttttttttaaagca                                                    >  2:672479/1‑138 (MQ=255)                                                                                                         gCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATc                                            <  2:91608/151‑1 (MQ=255)                                                                                                         gCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGCGGTTTTTTTGTGATC‑AATTTTAAAAAAAAAACAATTGTCCGTTAAAAATAAAACAACGGTTCCATTAATTTGGTTTTTATTCCCTTTATTTTTTAaattaa                                                    >  2:700296/1‑143 (MQ=255)                                                                                                           cGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTTGTC‑AATTTTTAAAAAAAAAAAATGATCCGATAAAAATAAAAAAACGTTTCAATTTGTGGGGGTTTTATTACTTTTTTTTATTTAATTAATGTCttt                                             >  2:17787/1‑146 (MQ=255)                                                                                                           cGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATC‑AATTTCAAAATAAAAAAAATGATCCGATAAAAAAAAAACAGCGGTTCAATTGATGTGGGTTTTGTCACTTTTTTTGATTAAATGAATGTTTATCtt                                          >  2:193782/1‑151 (MQ=255)                                                                                                            gCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTc                                         <  2:1035735/151‑1 (MQ=255)                                                                                                              atatCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGt                                       <  1:352449/151‑1 (MQ=255)                                                                                                              atatCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATC‑AATTTTAAAATAAAAAAAAAGATCCGATAAAAAAAAAAAAGCGGTTTAATTTATGTGGTTTTGATCACTTTTTTTTATTAAATGAATGTCTATCtt                                          >  2:591685/1‑148 (MQ=255)                                                                                                                atCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGttt                                     <  1:275102/151‑1 (MQ=255)                                                                                                                 tCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGATC‑AAATTTAAAAAAAAAAAAAAGATTCGATAAAAATAAAACAGCGGTTCTATTGATGTGGTTTTTATCACTTTTTTTTATTAAATGAATGTCTATCTTTGttt                                     >  1:76999/1‑150 (MQ=255)                                                                                                                   aGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGGTC‑AATTTCAAAAAAAAAAAAAAGAACCGATAAAAAAAAAACAGCGGTTCAATTGATGTGGGTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGttt                                     >  1:819232/1‑148 (MQ=255)                                                                                                                   aGCTTAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTGTGATC‑AATTTCAAAATAAAAAAAAAGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGGTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTcc                                   >  2:1153066/1‑150 (MQ=255)                                                                                                                       tAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGGTCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATGAAATGAATGTCTATCTTCGTTTCCATCa                               <  1:659817/150‑1 (MQ=255)                                                                                                                       tAAAAAATGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATT‑AATTTTAAAATAAAAAAAATGATCCGATAAAAATAAAAAAGCGTTTCAATTGATGTGGTTTTTATCACTTTTATTTATTAAATTAATGTCTATCTTCGTTTCCAt                                 >  2:39375/1‑148 (MQ=255)                                                                                                                           aaaTGAACCATCGCCAACGGCGGTGGTTTTTTTTTGATC‑AATTTTAAAAAAAAAACAAATAATCGATAAAAAAAAAAAAACGTTTCTATTGATGTGGGTTTTTTTAATTTTTTTTATTAAAAGAATGTTTATTTTCGTTTTCCTCaa                              >  1:329949/1‑147 (MQ=255)                                                                                                                           aaaTGAACCATCGCCAACGGCGGTGGGTTTTTTTTGATC‑CATTTTAAAAAAAAAACAAAAATCCCATAAAAATAAAACAACGTTTCGATTGATGTGGGTTTGATCACTTTTATTGATTAAATTTATGTCTATCTTCGttttcctgaa                              >  1:230773/1‑140 (MQ=255)                                                                                                                                 aCCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCt                    <  1:993422/151‑1 (MQ=255)                                                                                                                                    aTCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCa                 <  2:613000/151‑1 (MQ=255)                                                                                                                                              gcggTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGaa         <  2:757386/149‑1 (MQ=255)                                                                                                                                                ggtggtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTAc     >  1:736510/1‑151 (MQ=255)                                                                                                                                                ggtggtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTAc     <  1:895191/151‑1 (MQ=255)                                                                                                                                                   ggtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTGCATTGAGGAATTACGCa  <  2:401025/151‑1 (MQ=255)                                                                                                                                                    gtTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATCTCTATCTTCGTTTCCATCAACACTGATGGTCCATTGAGGAATTACGCa  >  1:1160170/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                      GACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGTGGTTTTTTTGTGATC‑AATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGATGTGGTTTTGATCACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCA  >  NC_000913/4101359‑4101655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑