Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,684,749	0	A	C	40.6%	95.4 / 10.0	64	D164A (GAC→GCC)	tus	inhibitor of replication at Ter, DNA‑binding protein
Reads supporting (aligned to +/- strand):  ref base A (27/11);  new base C (0/26);  total (27/37)
Fisher's exact test for biased strand distribution p-value = 1.65e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CACATCAATAAACTCAAGACCACGTTCGAGCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTGGCAAAGAAAACTGGAGC  >  NC_000913/1684604‑1684898                                                                                                                                                       |                                                                                                                                                      cacaTCAATAAACTCAAGACCACGTTCGAGCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCg                                                                                                                                                  >  1:1233152/1‑151 (MQ=255) cacaTCAATAAACTCAAGACCACGTTCGAGCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCg                                                                                                                                                  <  1:97093/151‑1 (MQ=255)          aaaCTCAAGACCACGTTCGAGCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTAc                                                                                                                                         >  1:639255/1‑151 (MQ=255)          aaaCTCAAGACCACGTTCGAGCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTAc                                                                                                                                         >  2:126810/1‑151 (MQ=255)              tCAAGACCACGTTCGAGCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCtt                                                                                                                                     >  2:742769/1‑151 (MQ=255)                aaGCCCACTTTCGAGCATATCGTCACGGTTAAATCAAACCCCCCCCCCGCGCCACGTTTTGAAG‑GGGTGCATCGTCTTTTGCC‑GGGGCTGATCCCCCTTAA‑TGCTTCCCGCCCGCTCACCTTTCTG‑CAC‑GCCCCCGCCACTTTACGCTttg                                                                                                                                   <  1:676996/151‑1 (MQ=255)                    ccACGTTGGAGCATATCGTCCGGGTTAAACCAGAACCCCCCCCCGCGGCACTTTTTGAAT‑GGGTGCTTCGTTATTTGCC‑GGGGCTGATCCCCCTTAA‑TGCTTACCGCCCGCCCCCCTTTCTG‑CCC‑GCCCCCGCCACTTTACGCTttggt                                                                                                                                 <  1:1278322/149‑1 (MQ=255)                       cGTTCGAGCATATCGTCACGGTTAAATCAGAACCCCCCCCCGCGGCACGTTTTGAAT‑GGGTGCATCGTCTTTTGCC‑GGGGCTGATCCCCCTTAA‑TGCTTCCCGCCCCCTCCCCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGc                                                                                                                            <  1:1129602/151‑1 (MQ=255)                         ttCGAGCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCt                                                                                                                           >  2:906580/1‑150 (MQ=255)                            gAGCATTTCGTCACGTTTGAATCAGACCCCCCCCCCGCGGCACTTTTTGATT‑GGGTGCCTCTTCTTTGGCC‑GGGGCTGACCCCCTTTAT‑TTCTTCCCGCCCTCTCACCTTCCTG‑CCC‑CCCCCCGCCACTTTACGCTTTGGTTGGGCtaata                                                                                                                       <  2:743577/151‑1 (MQ=255)                             aGCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCtaat                                                                                                                        >  2:333347/1‑149 (MQ=255)                              gCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCtaataa                                                                                                                      >  1:648537/1‑150 (MQ=255)                                atttCGTCCCGGTTAAATCAAAACCCCCCCCCCCGGCCCTTTTTGAAT‑GGGTTCATCGTCATTGGCC‑GGGGCTGATCCCCCTTAT‑TGCTTCCCGCACGCTCACCGTTCTG‑CCC‑GACCCCGCCACTTTACGCTTTGGTTGGGCtaataa                                                                                                                      <  2:1209490/145‑1 (MQ=255)                                atatCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGCTCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCtaataa                                                                                                                      >  2:321214/1‑148 (MQ=255)                                atatCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAAc                                                                                                                    >  1:103360/1‑150 (MQ=255)                                  atCGTCGCGTTTAAACCAGCCCCCCCCCCCGCGGCTTGTTTTGAAT‑GGGTGCGTCGTTATTTCCG‑GGGGCTGATCCCCTTTAT‑TGCTTCCCGCTCGCTCCCCGTTCTG‑CAC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCtaataa                                                                                                                      <  2:466367/146‑1 (MQ=255)                                    cgccACGGTTAAACAAAAACCCCCCCCCGCGGCCCGTTTAGAAG‑GGGTACTTCGTCTTTCCCT‑GGGGCTGTTCCCCTTTAT‑GGTTTCCCCCCCGCTCCCGGTCCTC‑CAA‑CCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACatat                                                                                                                <  1:431100/147‑1 (MQ=255)                                      tCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCAt                                                                                                             >  2:782652/1‑151 (MQ=255)                                         cGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTa                                                                                                           >  2:400061/1‑150 (MQ=255)                                          ggTTGAATAAAACCCCCCCCCCGCGGCTCGTTTTGAAT‑GGTTGCATCGTCTTTTGCG‑GGGGCTGA‑CCCCCTTAATTGTTTCCCGCCCGCTCCCCTTTCTC‑CAC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTaa                                                                                                          <  2:918586/150‑1 (MQ=255)                                            ttaaaTCAAACCCCCCCCCCGCGTCCCTTTTTGAAT‑GGGTGCTCCGTCTTTTGCC‑GGGGCTAATCCCCCTTAT‑TCCTTCCCGCCCGCTCACGGTTCTG‑CCC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTa                                                                                                           <  1:831198/144‑1 (MQ=255)                                               aatcccacccccccccCGCGGCCCATTTTGACT‑GTTGGCATGCTCATTGCCC‑GGTGTTTCTCCCCCTTAA‑TGTTTTCCCCCCCCAC‑CCGTTCCA‑CCCGGACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAAt                                                                                                      <  2:1162952/139‑1 (MQ=255)                                                 tCAGACCCCCCCCCCGCGGCACGTTTTGAAG‑GGGTGCATCGTCATTTGCC‑GGGGCTGACCCCCCTTAA‑TGCTTCCCGCACGCTCACCTTTCTG‑CAC‑ACCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTa                                                                                                   <  2:13518/150‑1 (MQ=255)                                                   agagCTCCCCCCCGCGCCGCTTTTTGAAG‑GGGTGCATTTCCGTTTCCC‑GGGGCAGACCCCCTTTAA‑TGCTTCCCGCACCCCCACCTTTCCC‑CCA‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAAtt                                                                                                     <  2:383085/146‑1 (MQ=255)                                                        tCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGtg                                                                                            >  2:1115925/1‑150 (MQ=255)                                                         ccccccCGCGGCACGTTTTGAAG‑GGGTGCATCTTCTTTTGCC‑GGGGCTGATCCCCCTTAA‑TCCTTCCCGCCCGCTCCCCGTTCTG‑CCC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGtg                                                                                            <  1:1185468/149‑1 (MQ=255)                                                              ccGCGGCACTTTTTGATG‑GGGTGCTTCTTCTTTTGCC‑GGGGCTGATCCCCCTTAA‑TGCTTCCCGCCCGCTCCCCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGt                                                                                     <  1:322710/151‑1 (MQ=255)                                                                 cgGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCt                                                                                  >  1:1215800/1‑151 (MQ=255)                                                                  ggCACTTTGTAAAG‑GGGTGCATCGTCTTTTGCG‑GGGGCTGACCACCCTTAA‑TGCTTCCCGCACCCTCCCCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTc                                                                                    <  1:1181329/148‑1 (MQ=255)                                                                  ggCACGTTTTGAAG‑GGGTGCATCGTCTTTTGCC‑GGGGCTGATCCCCCTTAA‑TGCTTCCCGCCCGCTCCCCGTTCTG‑CAC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCt                                                                                  <  1:167769/150‑1 (MQ=255)                                                                  ggCACGTTTGGAAG‑GGGTGCATCTTCTTTTGCG‑GGGTCTGATCCCCCTTAA‑TGCTTCCCGCACGCTCCCCTTTCTG‑CCC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTcc                                                                                   <  1:1048548/149‑1 (MQ=255)                                                                  gccaggTTTTGAAG‑GGGTGCATCGTCTTTTGCC‑GGGGCTGATCCCCCTTAA‑TGCTTCCCGCCCCCTCCCCGTTCTC‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTcc                                                                                   <  1:429167/144‑1 (MQ=255)                                                                    cACTTTTTAAAG‑GGGTGCATCGTCTTTTGCC‑GGGGCTGATCCCCCTTAA‑TTTTTCCCGCCCGCTCCCCGTTCGG‑CAC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTgg                                                                                <  1:770367/150‑1 (MQ=255)                                                                     cccttttGAATGGGGTGCATCGTTGTTTGCG‑GGGGCTGACCCCCTTTAT‑TGCGTACCCCCCCCTCACCTTTCTG‑CCC‑CCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTcc                                                                                   <  2:741877/144‑1 (MQ=255)                                                                       gTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGcac                                                                             >  2:858320/1‑150 (MQ=255)                                                                                 gggTGCTTCGTCATTTGCG‑GGGGCTGTCCCCCTTTAA‑TGTTTCCCGCCCGCTCTCCTTTCGC‑CAC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGa                                                                      <  2:871887/148‑1 (MQ=255)                                                                                     gccttcttctttGCCGGGGGCTCACCCCCCTTAT‑TGCTGCCCGCACGTTCCCCTTTCTC‑CAC‑ACCACCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGaaaaaa                                                                 <  2:617430/141‑1 (MQ=255)                                                                                       aTCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCt                                                             >  1:23596/1‑151 (MQ=255)                                                                                         cGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTg                                                            >  1:1250526/1‑150 (MQ=255)                                                                                          gccATTAGCG‑GGGCCTGTTCCCCCTTAA‑TGCTACCACCTCCCTCACC‑TTCGGCCCC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGaa                                                          <  1:1185723/149‑1 (MQ=255)                                                                                            cttttCCC‑GGGGCTGACCCCCCTAAA‑TATTTCCCGCTCTCTCCTTCTTCTC‑CAC‑CCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTg                                                            <  1:1255141/145‑1 (MQ=255)                                                                                            cATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAAt                                                        >  2:134136/1‑151 (MQ=255)                                                                                              tttGCG‑GGGGCTGACCCCCCTTAT‑TGCTTCCCGCACGCTCACCTTTCTC‑CCC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATc                                                       <  1:941578/150‑1 (MQ=255)                                                                                               ttGCG‑GGGGCTAACCCCCTTTAA‑TGTTTCCCGCACGCTCCCCTTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAAt                                                        <  2:535361/148‑1 (MQ=255)                                                                                                  cc‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATcacca                                                   >  2:661417/1‑150 (MQ=255)                                                                                                   cgggggCTGATCCCCTTCAT‑TGCTGGCTGCCCCCTCACCGTCCTC‑CCC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGGTGAAGTCCTGGCACAGCTGGAAAAAAGcc                                                              <  2:280660/137‑1 (MQ=255)                                                                                                     ggggCTGATCCCCTTTAA‑TTCTTCCCCCACCCTCCCCTTTCTC‑CAC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATcacca                                                   <  2:325757/148‑1 (MQ=255)                                                                                                          tGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAgtg                                            >  2:1107253/1‑150 (MQ=255)                                                                                                           gATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTc                                          >  2:1200964/1‑151 (MQ=255)                                                                                                              cccccTTAA‑TGCTTCCCGCCCGCTCCCCGTTCTG‑CAC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCa                                       <  1:1002153/149‑1 (MQ=255)                                                                                                                  cTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGt                                   >  2:337934/1‑151 (MQ=255)                                                                                                                  cTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGt                                   >  2:244036/1‑151 (MQ=255)                                                                                                                     aa‑TGCTTACCGCCCGCTCCCCGTTCTG‑CAC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGt                                   <  1:143938/148‑1 (MQ=255)                                                                                                                      a‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGAc                               >  2:390752/1‑151 (MQ=255)                                                                                                                           ttcccgccgccTCACCGTTCTC‑CCC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTgg                                 <  2:173556/135‑1 (MQ=255)                                                                                                                             aCCGCACGCTCACCGTTCTG‑CAC‑GACCCCTCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGAcgcg                            >  1:365688/1‑148 (MQ=255)                                                                                                                              ccgcccgcCCCCCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGAcgcg                            <  1:213134/147‑1 (MQ=255)                                                                                                                              ccgcccccccgctgTTCGG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCGCCGTGGAcgcgcg                          <  1:551544/136‑1 (MQ=255)                                                                                                                                   cGCCCACCTTTCTG‑CAC‑CCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTg                   <  1:402075/151‑1 (MQ=255)                                                                                                                                    gCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTgg                  >  2:350707/1‑151 (MQ=255)                                                                                                                                        aCCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTGGCaa               >  1:924336/1‑150 (MQ=255)                                                                                                                                         ccGTTCTG‑CAC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTGGCAAAg             <  1:760527/151‑1 (MQ=255)                                                                                                                                              ttatccgcaaCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTGGCa                <  1:245720/136‑1 (MQ=255)                                                                                                                                                 ccAC‑GCCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTGGCAAAGAAAACt       <  2:780391/149‑1 (MQ=255)                                                                                                                                                      gACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTGGCAAAGAAAACTGGAGc  >  2:1198754/1‑151 (MQ=255)                                                                                                                                                       aCCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTGGCAAAGAAAACTGGAGc  <  1:294515/150‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                      CACATCAATAAACTCAAGACCACGTTCGAGCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAAT‑GGGTGCATCGTCATTTGCC‑GGGGCTGATCACCCTTAA‑TGCTTACCGCACGCTCACCGTTCTG‑CAC‑GACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTGGCAAAGAAAACTGGAGC  >  NC_000913/1684604‑1684898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑