| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,665,702 | 0 | C | A | 41.6% | 112.2 / 48.4 | 91 | A37S (GCG→TCG) | gadX | acid resistance regulon transcriptional activator; autoactivator |
| Reads supporting (aligned to +/- strand): ref base C (46/6); new base A (0/37); total (47/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.10e-19 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAAT > NC_000913/3665552‑3665851 | aGTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGc > 2:861146/1‑151 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCa > 2:409415/1‑150 (MQ=255) gaACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAAc > 2:833063/1‑151 (MQ=255) aaCGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAAcc > 2:748270/1‑151 (MQ=255) aCGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑a < 1:673986/151‑1 (MQ=255) cGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAAcc > 1:110417/1‑149 (MQ=255) aGTAATGAAGAATCTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTTCTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑g < 2:901610/149‑1 (MQ=255) tAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑Tc > 2:286999/1‑150 (MQ=255) tAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑Tc > 1:184004/1‑150 (MQ=255) tAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑Tc > 1:1182442/1‑150 (MQ=255) aaTGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCAc > 2:1206474/1‑151 (MQ=255) aaTGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCAc < 2:445333/151‑1 (MQ=255) gaaACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCAt > 2:115148/1‑151 (MQ=255) aaaTTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGCGCATCGGGAGAAATAATGAATGCTTGTCCTTTGACACGAATACAAATTTTTCAA‑CACACTTATCTACCCGATTTTGGTTTGCATCCGCAAAACCC‑A‑GT‑TCACCGCCAt < 1:845568/150‑1 (MQ=255) aaCTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCAtt > 1:418476/1‑150 (MQ=255) ttttttATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGTAAAAACC‑A‑GG‑TCACCGCCATTaaa > 2:625239/1‑150 (MQ=255) ttttttATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTaaa > 2:165797/1‑150 (MQ=255) ttttATTTGCATAAATTTTTAATCCCCCCTCCTTGAGCCTCGGAAAAAATAATAAAGGCGTGCCCCTTGACACAAATAAAAAATTTTCAA‑CACCCTTATCTACAAAATTTTGCCTTGCATCCCAAAAAACC‑A‑GG‑TCACCGCCATTAAAAt < 1:80832/150‑1 (MQ=255) ttttATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAAt > 1:207263/1‑150 (MQ=255) tttATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAAt > 2:542943/1‑149 (MQ=255) tgtgCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGat > 1:681918/1‑151 (MQ=255) tttAATCCCCCCCCCTTGAGCATGGGGAAAAATAATGAAAGCGTGCCCCTTGACACAAATAAAAAATTTCCAA‑CCCCCTTATCTCCTCAATTTTGGTTTGCATCCGAAAAACCC‑A‑GG‑CCACCGCCATTAAAATAGCGATATTCACCATTa < 1:451037/150‑1 (MQ=255) aagccctcctcttTGGGCATGGGGAAAAATAATAAAAGCGTGCCCCTTGACACAAATAAAAAATTTTCAA‑CCCCTTTTTCTACTAAATTTTGGTTTCCACCCAAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAAc < 1:1114524/145‑1 (MQ=255) cctcctcctTGAGCATGGGAAAAAAAAATGAAAGCGTGCCCCTTGACACAAATAAAAAATTTTCAA‑CACCCTTATCTACTCGAATTTGGCTTGCACCCGAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATg < 2:1002170/149‑1 (MQ=255) tGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAatat > 1:974940/1‑150 (MQ=255) gAGCAGCGGGAAAAAAAAAAAAGGCTGGTCCCTAGCCACGAATA‑AAAATTTTCAACCCCATTTTTCTATTCAATTTTGCCTTCCACCCGAAAAATCC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTg < 1:703675/142‑1 (MQ=255) aGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt > 1:1233323/1‑151 (MQ=255) cATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAttt > 2:482626/1‑150 (MQ=255) agggggAAAAAAAAGAAAAGCGTGCCCCTTGACAGAAAAAAAAATTTTTAAA‑CCCCCTTATCTACTCAATTTTGCCTGGCCCCCG‑AAAAACC‑AGGG‑CCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTAt < 2:1044829/148‑1 (MQ=255) cGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt > 1:514760/1‑151 (MQ=255) gggAAAAATAATAAAAGCGTGTCCCTTGACACAAATAAAAAATTTCCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt < 2:171000/150‑1 (MQ=255) ggAAAAATAAGTAACGCCTGTCCATTTACCGAAATACAAATTTTCCAA‑CTCCATTTTCAACTCAAATTGGCCTAGGACCCGAAAAAACC‑A‑GG‑TCGCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTc < 2:153297/150‑1 (MQ=255) aaaaaaaaaaaaaGCTTGCCCCTTGAAAAAAAAAAAAAATTTCCAA‑CCCTTTTTTTTACTAAATTTTGCTTTGCACCCAAAAAATCG‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCtt < 1:950483/140‑1 (MQ=255) aaaaaTAATGAAAGCGTGCCCCTTGACACAAAAAAAAAATTTACAA‑CACACTTATCTACCCGATTTTGGCTTGCACCCGAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTg < 2:318855/149‑1 (MQ=255) aaaaaTAAGAAAGGCGTCTCCCTTAACAAAAAAAAAAAATTTCAAA‑CCCCCTTATCTACCAAATTTTGTCTTCCACCCAAAAAAACC‑G‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTg < 1:1171609/149‑1 (MQ=255) aaaaaaTGAAAGCGTGCCCCTTCACACGAAAAAAAATTTTTCAC‑CCCATTTATCTCCTCAATTTTGGTTTCCACCGAAAAAAACG‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCa < 1:514434/151‑1 (MQ=255) aataatGAAAGCGTGTCCCTTGACACAAAAAAAAAATTTTCAA‑CACCCTTATCTACTCGAATTTGGCTTGCACCCGAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCAt < 2:615875/151‑1 (MQ=255) aataatGAAACCGGGTCCCTTTACACGAATACAAAATTTTCCA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAATAACC‑A‑GG‑TCACCGCCCTTACAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGc > 1:650958/1‑149 (MQ=255) aatgaatgCCTGCCCTTTAACACAAAAACAAATTTTTCAA‑CACATTTATCTACTCGATTTTGGCTTGCACCCGAAAACACC‑A‑GA‑TCTCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACg < 1:530769/151‑1 (MQ=255) aatGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACg > 2:666455/1‑151 (MQ=255) atGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGc > 2:575752/1‑151 (MQ=255) cGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAAtt > 1:17886/1‑148 (MQ=255) gtgtCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAc > 2:1220325/1‑151 (MQ=255) tgtCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAc > 1:313664/1‑150 (MQ=255) gtCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACa > 1:277702/1‑150 (MQ=255) ccggtGACACGAAAACAAATTTTACAA‑CACTCTTATCTTATAGATTTTGCCCGACATCCGAAAAAGCG‑A‑GG‑ACTCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTa < 1:370797/140‑1 (MQ=255) cccTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAAtt > 1:261774/1‑151 (MQ=255) ccattaccaggAACACAAATTTTTCAA‑CACTTTTATCTCCCCGATTTTGCCTCGCTACCAAAAAACCC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAAtt < 2:119329/141‑1 (MQ=255) ccTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑ACACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTc > 2:673570/1‑151 (MQ=255) cTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTcc > 2:450500/1‑151 (MQ=255) tGACACAAATAAAAAATTTTCAA‑CACATTTATCTACTCGATTTTGGCTTGCCCCCAAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATAAATTTATGTCTTGCATACGCAATTAGACAATTccc < 2:1089051/150‑1 (MQ=255) acacAAATACAAAATTTCCAA‑CACACTTCTCCACCCAATTTTGGCTTCCATCCAAAAAACCC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATg < 2:1177257/151‑1 (MQ=255) acaaaaaaaaaaTTTTCAA‑CACACTTATCTCCTCAAATTTGGCTTCCACCCGAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTa < 2:301648/143‑1 (MQ=255) caaaaaaaaaaTTTACAC‑CACATTTATCTTCTCGATTTTGGCTTCCATCCAAAAAAACG‑A‑GT‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAAt < 1:897093/134‑1 (MQ=255) caaaTAAAAAATTTACAC‑CCCACTTATCTACTCAATTTTGTCTTCCACCCAAAAAAACC‑G‑GG‑TCTCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCAt < 1:861100/145‑1 (MQ=255) aaTAAAAAATTTCCAA‑CCCCTTTATCTACTAAATTTTGTCTTCCACCCGAAAAACCC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTa < 1:1225763/148‑1 (MQ=255) aCAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGAtt > 1:818702/1‑151 (MQ=255) aaaTTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGAtt > 1:134675/1‑148 (MQ=255) aaaTTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGc > 2:1078069/1‑150 (MQ=255) atttttCAA‑CACCCTTTTCTACCCAATTTTGGTTTGCATCCAAAAAACCC‑A‑GT‑TCCCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCAt < 2:137417/149‑1 (MQ=255) ttttCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCAt > 2:406896/1‑149 (MQ=255) tttCAA‑CACATTTATCTCCTCGATTTTGGCTTGCACCCAAAAAACCC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAg < 2:25986/150‑1 (MQ=255) ttCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGtt > 2:838111/1‑151 (MQ=255) tcat‑caCACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTg > 2:357411/1‑151 (MQ=255) aa‑CACACTTATCTACTCGATTTTGGCTTGCACCCAAAAAAACC‑A‑GG‑CCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGa < 2:247803/150‑1 (MQ=255) cacacTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACtt > 2:79177/1‑151 (MQ=255) acacTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACtt > 2:224954/1‑150 (MQ=255) acacTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACtt > 1:282198/1‑150 (MQ=255) ttATCTTCTCGAATTTGGTTTCCA‑CCCCAAAAACC‑C‑GGCTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTaa < 2:495528/148‑1 (MQ=255) ttATCTACTCGAATTTGGCTTGCATCCGCAAAAACA‑C‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAatat > 1:869770/1‑151 (MQ=255) aCTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACAt > 1:591377/1‑150 (MQ=255) cTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATa > 1:569104/1‑150 (MQ=255) caattttGGCTTGCACCCGAAAAACCC‑A‑GT‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATa < 2:1177071/144‑1 (MQ=255) gAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAAc > 1:109866/1‑150 (MQ=255) aaaTTTGGCTTCCCCCCGAAAAACCC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATa < 2:1054891/146‑1 (MQ=255) aaaTTTGGCTGGCA‑CCGAAAAAACCAA‑GT‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATaaa < 2:421651/148‑1 (MQ=255) aTTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACat > 1:400343/1‑150 (MQ=255) aTTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACat > 2:1054743/1‑150 (MQ=255) tttGGTTTGCACCCCAAAAACCC‑A‑GG‑CCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAatat < 2:730573/138‑1 (MQ=255) tttGGCTTGCACCCGAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATaa < 2:184008/145‑1 (MQ=255) tttGGCTTCCACCCAAAAAAACC‑A‑GT‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACa < 1:22102/142‑1 (MQ=255) ttgggcttccccccGAAAAACCC‑A‑GT‑CCCCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAAc < 2:495550/135‑1 (MQ=255) ttgggCTTGCACCCAAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACat < 2:207268/146‑1 (MQ=255) ttGGCTTGCACCCGAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACatat < 2:661334/150‑1 (MQ=255) tgggCTTTCCTCCAAAAAAACC‑A‑GT‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATaa < 1:826386/142‑1 (MQ=255) ggtttGCATCCGAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTAc < 2:218337/148‑1 (MQ=255) ggCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTa > 1:415586/1‑150 (MQ=255) ttccATCCAAAAAACCC‑T‑GT‑TTACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACt < 1:306703/146‑1 (MQ=255) tCCACAAAAACC‑A‑GG‑CCGCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTtta < 2:594178/149‑1 (MQ=255) ccGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTttatt > 1:1111357/1‑150 (MQ=255) ccGAAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTttatt < 1:563999/150‑1 (MQ=255) gCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAAt > 2:961822/1‑151 (MQ=255) | AGTGATGAACGAGTAATGAAGAAACTTTTTTATGTGCATGAAGATTTAATGCCTCCTCCTTGAGCATCGGGAGAAATAATGAAAGCGTGTCCCTTGACACGAATACAAAATTTTCAA‑CACACTTATCTACTCGAATTTGGCTTGCATCCGCAAAAACC‑A‑GG‑TCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATATTACATAAACATATTACTGTTTATTAAT > NC_000913/3665552‑3665851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |