| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 370,876 | 0 | C | G | 40.9% | 120.9 / 31.4 | 66 | S200R (AGC→AGG) | mhpB | 2,3‑dihydroxyphenylpropionate 1,2‑dioxygenase |
| Reads supporting (aligned to +/- strand): ref base C (33/6); new base G (0/27); total (33/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.04e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.28e-01 | |||||||||||
TACCCGCATGTTGGGTGAAGCCATTGGACGTTTCACCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACTTTGCTGGAGCAGGGACG > NC_000913/370726‑371022 | tACCCGCATGTTGGGTGAAGCCATTGGACGTTTCACCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGc > 2:519012/1‑151 (MQ=255) cGCATGTTGGGTGAAGCCATTGGACGTTTCACCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCggg > 1:527084/1‑150 (MQ=255) tGTTGGGTGAAGCCATTGGACGTTTCACCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGaa > 2:868593/1‑148 (MQ=255) tGGGTGAAGCCATTGGACGTTTCACCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGAtt < 2:127024/150‑1 (MQ=255) tGGGTGAAGCCATTGGACGTTTCACCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGAtt < 1:954702/150‑1 (MQ=255) tCACCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAAtt > 2:1436416/1‑151 (MQ=255) tCACCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAAtt > 2:741644/1‑151 (MQ=255) caccacCCCTCAAAAAAACCGGGTGCTGTTCC‑GGGTTTCGGGGGGTTTTCCCCAT‑CGGCCGCGGGG‑CCCC‑GAG‑CGGGGAAAA‑GCCGATCCCCAT‑ATGCGCGCCCGTTTGTGGGGGAGGGGGAAATATTTCCCCGCCAGTGAGCGCGAATTg < 1:1344212/151‑1 (MQ=255) aCCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGc > 2:346977/1‑151 (MQ=255) aCCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGc > 1:966721/1‑151 (MQ=255) ccacccctctAAATAACCGGGTGTTTTTCCTGGTTTCGGGTGGGTTTT‑CCCAT‑CGCCGGCCGGT‑GCCC‑GAA‑CGGGAGAAA‑GCCGATCCCAAT‑CTGCCCGACCTTTTTTGGGGGGGGGGAAAAGATTTCCCCGCCAGTGAGCGCGAATTg < 1:1476136/143‑1 (MQ=255) ccAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCg > 1:1402311/1‑151 (MQ=255) aGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTc > 1:540840/1‑151 (MQ=255) caaaacaaccgcgTGTTGTGGCGGGGTTCCGG‑GGGCTTT‑CCCCTGCGGCGGCGGGC‑GCCC‑GAA‑GGGGAAAGG‑GCGGAGCCCCAT‑AGGCGCGCCCTTTGGTGGGGGGGGGGGAAATATTGTCCCGCCAGTGAGCGCGAATTGCGTCAGCaa < 2:1202074/141‑1 (MQ=255) tcAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACg > 2:1017974/1‑151 (MQ=255) tcAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACg > 1:119453/1‑151 (MQ=255) aaTAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACggg > 1:859743/1‑151 (MQ=255) aaaCGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTg > 2:1390003/1‑150 (MQ=255) aCGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGAtt > 2:1224844/1‑151 (MQ=255) cctctgcgtttCCTGGTTTGCGGGGGTCTTC‑CCCTT‑CCGCCGCC‑GT‑TCCC‑GAACCTGGAG‑AA‑GCCCCGGCCCATAACGCGCGCCCGTTTGTGGGGGGGGGGAAAATATTTTCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGAt < 1:541900/140‑1 (MQ=255) ttGTTCCTGGGTCCGGGTGGGTTTC‑CCAAC‑CAGCCGCGGGG‑GCCC‑GAA‑CGGGCGAAA‑GCCGACGCCCAT‑AGGCGCGCCCGTTTGTGGGGGGGCGGAAAAATTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGAtt < 1:310194/143‑1 (MQ=255) ccTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTg > 1:881945/1‑149 (MQ=255) cTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTg > 1:25197/1‑148 (MQ=255) cTGGGCTCCGGGTGGCCTT‑CCCCA‑CCGCCCCGGGAGGCCC‑GAG‑CTGGAGAAA‑GCTGATGCCCTT‑GGGCCCGACCGTTTGTGGGGGGGGGAAAAATTTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTg < 2:944735/149‑1 (MQ=255) gggTCCGGGGGGGTTTC‑CCCAC‑CGGCCGCCGGG‑GCCG‑GAC‑GTGGGAAAG‑GCGGGGGCCGAT‑CGGCGCGCCGGGTTGTGGGGGGGGGGAAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTgag < 2:173811/148‑1 (MQ=255) ggTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGt > 2:717683/1‑151 (MQ=255) tCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTttg > 2:324665/1‑151 (MQ=255) cGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTttgtt > 1:1301322/1‑151 (MQ=255) ggCTTC‑CCCAG‑CGGCCGCGGGT‑CCCC‑AAC‑CTGGCAAAA‑GCCGATGCCCTT‑GTGCGCGACCGTGTTTGGGGGGGGGGAAAAGATTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGa < 2:632778/151‑1 (MQ=255) ttt‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATc > 1:193590/1‑150 (MQ=255) ttt‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATc > 1:881797/1‑150 (MQ=255) ccccAT‑CGCCCGCGGGT‑CCCA‑AAA‑GTGGAAAAC‑GCCGATGCCAAT‑TTGCGCGCCCGTTTGTGGGGGGGGGGAAAATATTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATc < 1:1217422/147‑1 (MQ=255) cccAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCag > 1:1211945/1‑149 (MQ=255) ccAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCag > 2:866915/1‑148 (MQ=255) cccaccgcccgcgGG‑GCCCGGAA‑CGGGCAAAA‑GCCGATCCCAAT‑ATGCGCGCCCGTTTGTGGGGGGGGGGAAAAGTTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCaga < 1:1139037/139‑1 (MQ=255) ccAGCCGCCGGT‑GCCC‑AAC‑CTGGCAAAA‑CCCGACCCCCAT‑ATGCCCGACCGTTTGTGGGGGAGGGGAAAAATTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAgaga < 1:1055662/147‑1 (MQ=255) ccgccgGT‑GCCC‑GAA‑CTGGAGAAA‑GCCGATGCCAAT‑ATGCGCGACCGTTTGTGGGGGGGGGGGAAAGTTTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCt < 1:487623/149‑1 (MQ=255) ccgccgGG‑GCCA‑G‑A‑CGGGGGAAAGGCCGATCCCCAT‑ATGCGCGCCCGTCTGTGGGGGGGGGGAAAAGATTCCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGc < 1:129236/151‑1 (MQ=255) cgGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATcc > 2:978431/1‑151 (MQ=255) c‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAAc > 1:832206/1‑151 (MQ=255) aa‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAAccc > 2:311932/1‑151 (MQ=255) ggggagAAA‑GCCGACCCCCAT‑GGGCGCGACGTTTTGTGGGGGAGCGGGAAAGATTCCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGa < 2:369900/146‑1 (MQ=255) ggaaaaa‑GCCGATCCCCAT‑ATGCGCGCCCGTTTGTGGGGGGGGGGAAAAGTTTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGAt < 1:868609/146‑1 (MQ=255) aaa‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTggg > 1:261316/1‑151 (MQ=255) aaa‑GCCGATCCCCAT‑GGGCGCGCCCGTCTGTGGGGGGGCGGGAAAGTTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGAttt < 1:1386329/148‑1 (MQ=255) aaaccggtgccccAT‑AGGCGCCCCCGTTTGTGGGGGAGGGGGAAAGTTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTg < 1:358987/139‑1 (MQ=255) acgcggATGCCCAT‑ATGGGGGACGGTTTGTGGGGGGGGGGGAAAGTTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTg < 1:710051/143‑1 (MQ=255) ccgttccctat‑agGCGCGACCGTTGGTGGGGGGGGGGGAAAGTTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATaa < 2:980281/142‑1 (MQ=255) ccgacccccAT‑ACGCGCGCCGGTTTGGGGGGGAGGGGAAAATTTTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATaa < 2:649518/145‑1 (MQ=255) ccGTTGCCGAT‑ATGCGCGCCGTTCTGTGGGGGTGCGGAAAAGTTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTg < 1:205912/145‑1 (MQ=255) ccGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATa > 2:91503/1‑150 (MQ=255) ccgttccccagttGCGCGCCCGTTTGGGGGGGAGGGAAAAAGTTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATa < 2:643726/138‑1 (MQ=255) gATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAAcc > 2:719699/1‑151 (MQ=255) atcccaatgtGCGCGACCGTTTGTGGGGGGGGGGAAAATTTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCa < 1:467762/142‑1 (MQ=255) cccAT‑AGGCGCGCCCGTTTGTGGGGGGGGGGAAAAGTTTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCa < 1:1032094/148‑1 (MQ=255) at‑atGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCAt > 1:1120703/1‑151 (MQ=255) at‑agGCGCGCCCGTCTGTGGGGGGGGGGAAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCAt < 1:1143929/151‑1 (MQ=255) gcgcgcCGGTGTGTGGGGGGGGGGAAAAGTTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCa < 2:1489677/146‑1 (MQ=255) cggacccGTGTGTGGGGGGGGGGAAAAGTTTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACtt < 1:596370/146‑1 (MQ=255) gcgccggtaggtgggggAGGGGGAAATATTCACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGa < 1:1015299/134‑1 (MQ=255) cgcccGTTTGTGGGGGGGGGGAAAATTTTCCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATg < 1:810250/142‑1 (MQ=255) tCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACTTTGCTgg > 1:1212963/1‑149 (MQ=255) tCTGTGGGGGAGGGGAAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACTTTGc < 1:1305664/146‑1 (MQ=255) cTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACTTTGCTGGAGc > 1:458743/1‑151 (MQ=255) tGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACTTTGCTGGAGc > 2:379041/1‑150 (MQ=255) gtgggggggggGAAAAGTTTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACTTTGCTGGAGc < 1:130635/146‑1 (MQ=255) gggAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACTTTGCTGGAGCAGGGAc > 1:890927/1‑151 (MQ=255) ggAGGGGGAAAGATTTCCCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACTTTGCTGGAGCAGGGACg < 1:231709/151‑1 (MQ=255) | TACCCGCATGTTGGGTGAAGCCATTGGACGTTTCACCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTT‑CCCAT‑CAGCCGCCGGT‑GCCC‑GAA‑CTGGCGAAA‑GCCGATGCCCAT‑ATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACTTTGCTGGAGCAGGGACG > NC_000913/370726‑371022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |