| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,222,233 | 0 | G | A | 55.9% | 28.5 / 87.5 | 68 | pseudogene (60/75 nt) | ycgH | pseudogene; putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base G (24/6); new base A (0/38); total (24/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.95e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.61e-09 | |||||||||||
GTGTGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCTG > NC_000913/1222083‑1222382 | gtgtGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑Tg > 2:1543/1‑151 (MQ=255)gtgtGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGAGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑Tg > 1:115913/1‑151 (MQ=255) aCAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCt > 2:116159/1‑151 (MQ=255) cAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTg < 1:241644/151‑1 (MQ=255) gATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATc > 2:689104/1‑151 (MQ=255) ggggCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATccc > 2:618478/1‑150 (MQ=255) gggCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCccgc < 2:125321/151‑1 (MQ=255) tAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGc > 2:457171/1‑151 (MQ=255) tAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGc > 1:734095/1‑151 (MQ=255) tAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGc > 2:906420/1‑151 (MQ=255) ttGGGGGAAATTAACCTTGGCGTAAAGGGCACCCTGAACCCGGCGGCCGGCTTCGGGGAGAGGTGGGCGTGCAGGTGGGTGAAAAGGGCT‑ACAATGACACC‑GCAGTGGTGGTGGACT‑TAAAATATATTTTCTGATCCCGCCGTTAGCTaa < 1:445965/150‑1 (MQ=255) gggggaAAATAAAACTTGGCGAAAAGGGCACCCTAAACCCAGCGCCCGGCGTCGGGGGAATGTGGGCGTGCAGGGGGGTAAAAATGGCT‑ACAATGACCCC‑GAGGTGAGGGTGGGCT‑GAAAATATAAGTTCTGATCCCGCCGTTAGCTaa < 1:429995/148‑1 (MQ=255) aacctgggCGAAAAGGGCACCCGGAACCCGGCGGCCAGGTTCGGGGGAATGGGGGCTTGCAGGTGGGTGATAATGGCT‑AAAATGCCCCC‑GGAGTGAGGGGGGGCT‑TAAAATATAGGTTCTGATCCCGCCGTTAGCTAAAAAACCGcgtc < 2:762854/143‑1 (MQ=255) aaaCTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGcgtcgt > 2:362658/1‑151 (MQ=255) gcgaaaaggcaaaCCGGAACCCAGCGGCCGGGTTTGGGGGAAGGGGGGGGTGGAGGTGGGTGATAATGGCT‑AAAAGGCCCCG‑GAAGTGATGGGGGGCT‑TAAAATTTAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATc < 1:847420/140‑1 (MQ=255) aaaaTGGCACCCGAAATCCGGCGGCCAGCGTGGGGGAAATGGGGGGGTGCAGTTGGGTAATAATGCCT‑AAAATCCCCCC‑GAAGTGATGGGGGGCT‑AAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCg < 1:119848/148‑1 (MQ=255) aaaTGGCCACCTGAATCCAGCGGCCAGCGTCGGGGAATTGGGGGCGTGCGGCTGGGTGATAATGCCT‑AAAATGCCACC‑GCAGTGATGGTGGGCT‑TAAAATATAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCg < 2:274311/148‑1 (MQ=255) aaaGGGCAACCTGACTCCGGCGGCGAGCGTGTGGGGAGTGGGGGGGTGCAGCTGGGTGATATTGGCT‑ACAATGACCCC‑GCAGTGATGGTGGGCC‑TGAAATATATTTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGa < 2:1073751/149‑1 (MQ=255) tGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCgg > 2:471027/1‑151 (MQ=255) ggCACCCTGAATCCAGCGGCCGGCGTCTGGGGAAGGGGGGGGTGCAGCGGGGTGAAAATGCCT‑AAAATGCCACC‑GCAGTGATGGTGGGCC‑TAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGt < 2:850835/151‑1 (MQ=255) acccgaaacccAGCGGCCGGCGTGGGGGGAATGTGGGCGTGCAGCTGGGTAATAATGGCT‑AAAACACCCCC‑GAATTGATGGTGGGCC‑TGAAATATAATTTCTGTTCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTAc < 2:991041/141‑1 (MQ=255) acccTGAATCCAGCGGCCAGCGTCGGGGGAATGGGGGCGTGCAGCGGGGTGATAATGGCT‑ACAAGGCCCCC‑GCGGTGATGGGGGCCC‑TAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACa < 2:990287/149‑1 (MQ=255) aCCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACat > 1:830147/1‑151 (MQ=255) ccgaaacccAGGGCCCGGCGTCGGGGGAATGGGGGGGGGCAGTTGGGTGATAATGGCT‑ACAATGCCCCC‑GAAGTGAGGGGGGGCT‑TAAAATATAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACat < 1:230697/143‑1 (MQ=255) ccTGAACCCGGCGGCCGGCGTCTGGGAAGTGGGGGCGTGCAGCTGGGTAATAAGGGCT‑AAAATGACCCC‑GCAGTGAGGGGGGCCC‑TAAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACat < 2:549016/150‑1 (MQ=255) ccTGAACCCAGCGGCCGGGGTCGGGGGATTGTGGGCGTGCAGCTGGGTAATAATGGCT‑ACAATGACCCC‑GAAGTGGTGGTGGGCC‑TAAAATATGAGTTCTTATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACa < 1:1041837/149‑1 (MQ=255) ccTAAACCCAGCGGCCAGCGTCTGGGAAATGTGGGCGGGCAGCTGGGTGATAAGGGCA‑AAAATGACCCC‑GAGGTGTTGGTGGCCC‑TAAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACata < 2:549141/151‑1 (MQ=255) cTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACata > 2:630031/1‑150 (MQ=255) gAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATg > 2:908842/1‑150 (MQ=255) aacccccggggCCGGCGTCGGGGGAATGGGGGCGCGCAGTGGGTTAATATGGGCT‑AAAATAACACC‑GAAGTGATGGGGGCCA‑TGAAATATATTTCCTGTTCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGa < 2:38763/142‑1 (MQ=255) aacccAGCGGCCAGCGTCTGGGGATTGGGGGCGTGCAGCTGGGTGATAATGGCT‑AAAATGACCCC‑GCGGTGATGGGGGGCC‑TAAAATAAAATTTTTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGaa < 2:1040827/148‑1 (MQ=255) aacccAGCGGCCAGCGTCTGGAGAGTGGGGGCGTGCAGCTGGGTGATAATGCCT‑AAAACGCCCCC‑GCATTGGGGGTGGGCT‑TAAAATATAGTTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACatat < 1:987047/145‑1 (MQ=255) aaTCCGGCGCCCAGCGTCGGGGGAATGTGGGCGTGCAGCGGGGTGATAAGGGCT‑ACAATGACCCC‑GCAGTGAGGGGGGGCC‑GAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACatat < 2:1034986/148‑1 (MQ=255) gCGGCAGGCGTCGGGGGAATGGGGGGGTGCAGCTGGGTGATAATGGCT‑AAAATGACACC‑GCAGTGATGGTGGGCC‑TAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAAtatt < 1:498794/150‑1 (MQ=255) ggCAAGCGTCGGGGGAATGTGGGGGTGAGGTTGGGTGATAAGGGCT‑ACAAGGACCCC‑GCAGGGATGGTGGGCT‑TAAAATATAAGTTCGGCCCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAAtattat < 2:430090/150‑1 (MQ=255) caaGCGTCGGGGGAATGGGGGCGTGCAGTGGGGTGAAAAGGGCT‑AAAATGACCCC‑GAGGTGAGGGGGGGCC‑TAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAttt < 1:551607/148‑1 (MQ=255) ctgggtgtGGGGAGGGGGGGCGTGCAGCGGGGTTA‑AAAGGCTAAAAAAGACACC‑GAAGTAATGGGGGGCG‑TAAAATAAAAGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAttt < 1:67581/142‑1 (MQ=255) cAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAttttt > 1:1029803/1‑151 (MQ=255) cAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAttttt > 1:56728/1‑151 (MQ=255) aGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAtttttt > 2:162761/1‑151 (MQ=255) gCGTGTGGGGAGTGTGGGGGTCGAGCGGGGTGAAAATGGCT‑ACAATAACCCC‑GCGGTGGGGGGGGGCA‑TAAAATAAAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAttt < 2:737382/147‑1 (MQ=255) gCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAtttttt > 1:654113/1‑150 (MQ=255) ggggAATGTGGGCGTGCAGTGGGGTGATAATGGCT‑AAAATGCCCCC‑GCGGTG‑TGGGGGGCCTTAAAATATAATTTCTGCTCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGAt < 2:1032002/150‑1 (MQ=255) ggAAGGGGGGGGTGCAGCGGGGTGATAATGGCT‑AAAATGACCCC‑GCAGGGAGGGTGGGCC‑AAAAATAAAGTTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGc < 2:630712/151‑1 (MQ=255) gtgGGGGTGCAGCGGGGTGATAAGGGCT‑AAAATGACACC‑GCAGTGAGGGTGGGCC‑TAAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCAc < 2:768816/148‑1 (MQ=255) gtgGGGGGGCGGTTGGGTGATAATGCCT‑ACAAGGCCCCG‑GGGGGGGGGGGGGGCC‑TAAAATAAAGTTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCAc < 1:642537/148‑1 (MQ=255) ggggggGTGCAGCTGGGTAATAATGCCT‑AAAATGACCCC‑GCAGTGAGGGGGGGCC‑TAAAATAAAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCa < 2:624835/149‑1 (MQ=255) gggggCGTGCAGCTGGGTAATAATGGCT‑ACAATGACCCC‑GCGGTGATGGGGGGCT‑TAAAATATAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGc < 2:371033/148‑1 (MQ=255) tgGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCAt > 2:703330/1‑151 (MQ=255) ggttggCAGCTGGGTAATAA‑GGGT‑AAAATGGCCCCGGCAGTGAGGGTGGACC‑TAAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATgg < 1:314427/146‑1 (MQ=255) ggCTTGCGGCGGGGTAATAAGGGCT‑ACAATCACCCC‑GGTGTGGTGGTGGGCC‑TAAAATAAATGTTCGGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATgg < 2:885067/151‑1 (MQ=255) gcagtgggttGAAAATGGCA‑AAAATGACCCC‑GGAGTGATGGTGGGCC‑TAAAATATATTTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtca < 2:159221/142‑1 (MQ=255) cAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtcat > 1:957004/1‑151 (MQ=255) ggtGGGTGATAATGCCT‑AAAATGACCCC‑GAAGTGATGGGGGGCC‑TAAAATATAATTTCTGCTCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtcatca < 1:952133/149‑1 (MQ=255) cTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtcatca > 2:79459/1‑150 (MQ=255) ggttGATAATGGCA‑AAAATGACCCG‑GAGGTGATGGGGGGCA‑TAAAATATAAGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAAt < 2:653489/147‑1 (MQ=255) tGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGcc > 2:475257/1‑151 (MQ=255) aaTGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTg > 2:247720/1‑150 (MQ=255) aaTGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTg > 2:331558/1‑150 (MQ=255) ggCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATc > 1:358418/1‑150 (MQ=255) t‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAAc > 1:295754/1‑150 (MQ=255) aaaaggccccc‑GAAGGGAGGGTGGGCT‑GAAAATAAAATTCCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAAc < 1:408727/140‑1 (MQ=255) aataccccggCAGTGAGGGTGGGCT‑TAAAATATAAGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGCGATCAACAGc < 1:116148/141‑1 (MQ=255) acC‑GCGGTGGTGGTGGGCT‑TAAAATATAATTTCTGCCCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGc < 1:689004/150‑1 (MQ=255) cc‑GCGGTGATGGGGGGCC‑TAAAATAAAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTg < 2:1094139/148‑1 (MQ=255) cgggttgtgggtggGCA‑AAAAATAAAAGTCCGAACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCgg < 1:625802/141‑1 (MQ=255) gATGGGGGGCT‑TAAAATATAGTTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGt < 1:618386/146‑1 (MQ=255) ggtggGCC‑TAAAATATAAGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTc < 2:245582/144‑1 (MQ=255) ggtggGCC‑AGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAgcg < 1:817451/151‑1 (MQ=255) tGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCTg > 2:569284/1‑151 (MQ=255) | GTGTGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCT‑ACAATGACACC‑GCAGTGATGGTGGGCC‑TGAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCTG > NC_000913/1222083‑1222382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |