| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 15,410 | 0 | T | G | 39.8% | 168.7 / 23.1 | 89 | intergenic (+112/‑35) | dnaJ/insL1 | chaperone Hsp40, DnaK co‑chaperone/IS186 transposase |
| Reads supporting (aligned to +/- strand): ref base T (3/50); new base G (35/0); total (39/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.01e-21 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCT > NC_000913/15261‑15534 | aTGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGtt < 2:826349/151‑1 (MQ=255) ggTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTtgt < 4:433968/151‑1 (MQ=255) ggTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTtg < 2:227565/150‑1 (MQ=255) tgtgAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑GCACCCCCCCAAAA‑GCT‑TAATTAAAGGGTGTgg > 1:1393641/1‑151 (MQ=255) gtgAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑TCACTCCCCCAAAC‑GCC‑CACTTAAGGGGTGTgg > 3:7125/1‑150 (MQ=255) gtgAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTgg < 2:740992/150‑1 (MQ=255) gtgAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGt < 2:748916/151‑1 (MQ=255) ctgAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑TGACCCCCCTGAAC‑GCC‑GACTTTAGGGGTgggg > 1:59586/2‑150 (MQ=255) gaagaaGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑t < 2:310808/151‑1 (MQ=255) aagaagTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑tt < 1:184213/151‑1 (MQ=255) aagaagTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑GTACTCCCCCAAAC‑GCC‑AACTTAAGGGGtgtg > 2:851479/1‑146 (MQ=255) agaagTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑TCACCCCCCTAAGC‑GCG‑AACTTTAGGGGTGTGGtt‑ttt > 1:790372/1‑150 (MQ=255) gaagTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTAc < 3:536973/151‑1 (MQ=255) agTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGc < 1:772287/151‑1 (MQ=255) ttttGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑GTACTCCCCTAAAA‑GCC‑AACTTTATGGGTGGGGGA‑ttttg > 4:54815/1‑143 (MQ=255) tttGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGa < 1:75323/150‑1 (MQ=255) tttGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑AAACTCCCCCAAGC‑GGT‑AACATAAAGGGTGTGGTA‑TTACGcccggt > 2:1131683/1‑147 (MQ=255) tGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGata < 4:186590/150‑1 (MQ=255) gacgacCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATg < 2:837355/151‑1 (MQ=255) gacCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑TCACTCCCCCAAAC‑GCT‑AACTTTAGGGGTGTGGGA‑TTTAGCCCGATattatt > 1:1417399/1‑151 (MQ=255) acCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑GCACCCCCCTAAAC‑GCT‑AACTTTAAGGGTGTGGGA‑TTAAGCCTGGTATGAttt > 2:1419102/1‑151 (MQ=255) ccTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑TCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTa < 1:1174638/151‑1 (MQ=255) cTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑GCACCCCCCCAAGA‑GCG‑AACTTAAGGGGTGTGGGA‑TTTTGCCTGATATGAttt > 1:543263/1‑149 (MQ=255) gACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACg < 3:108990/151‑1 (MQ=255) cccGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTg < 2:1089350/151‑1 (MQ=255) cccGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTg < 1:796463/151‑1 (MQ=255) gCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCg < 3:54816/151‑1 (MQ=255) tAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATTGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑TCACTCCCCTAAGC‑GCT‑AACTTAAGGGGTGTGGTA‑TTAAGCCTGATATGATTTAACGTGCCg > 2:862164/1‑149 (MQ=255) aaCCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGTGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCATGATATGATTTAACGTGCCGAt < 1:1370731/150‑1 (MQ=255) aaCCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑GTACTCCCATAAGC‑GCT‑AACTTAAGGGGTGTGGGA‑TTTAGCCTGATATTAttttaaaag > 1:394026/1‑139 (MQ=37) aaCCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGa < 1:1358460/149‑1 (MQ=255) aaCCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGAt < 1:139707/150‑1 (MQ=255) aCCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGa < 2:18388/151‑1 (MQ=255) cTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑TCACTCCCATAAAC‑GCT‑AACTTAAAGGGTGTGGGA‑TTTAACCCGATATGATTTAAAGTGCCGATGaa > 2:243166/1‑150 (MQ=255) ccccAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAAtt < 3:341845/150‑1 (MQ=255) ccccAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAAtt < 1:1353172/150‑1 (MQ=255) ccccAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTa < 1:1285692/151‑1 (MQ=255) cccAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAAt < 2:803789/148‑1 (MQ=255) aGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAc < 2:481734/151‑1 (MQ=255) gCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACg < 2:1417466/151‑1 (MQ=255) gCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACg < 1:924714/151‑1 (MQ=255) cTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TGTCTCCCCATAGG‑GGT‑TACTTAAGGGGTGTGGGG‑TTAAGCCTGGTATGATTTTAAGCGCCGACGGAATATTCCCACGAt > 1:557347/1‑151 (MQ=255) gggCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTc < 1:1455863/151‑1 (MQ=255) agCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGAGA‑TTAATCCCCCAAGA‑GGTAAACATAAAGG‑TGCGGGG‑TTACGCGTGTAAATATTTAAAAAGTCGATGGATTACACTCACGCTaaactgca > 4:106284/2‑144 (MQ=255) aGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑TGACTGCCATAAAA‑GCG‑AACTTAAGGGGTGTGGGG‑TTACGCCCGGGTTGGTTTTAAGTGCCGATGAATTACTCTTACGGTAAATGGTCAGc > 2:404734/1‑150 (MQ=255) aGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑GGAACCCCATAAGG‑GCC‑AACCTAAGGGGTGGGGGATTTACGCC‑GGTATGGTTTAAACTGGCGGAGAAAATCTTCCCCGATAACTGGGCAGc > 2:669239/1‑150 (MQ=255) aGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑ACACTCCCATAAAC‑GCC‑CAATTAAGGGGTGTGGTG‑TTAAACCTGATAAGATTTTACGGGGCGATGAAATAATCTCACggaaaattgtcgg > 2:948458/1‑137 (MQ=255) ggCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACCCCCCTAAAC‑GCT‑AACTTAAGGGGTGTGGGA‑TTAAGCCTGGTATGATTTAAAGTGCCGATGAATTAATCTCACGATAAATgg > 3:193646/1‑144 (MQ=255) gggTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTc < 2:334826/149‑1 (MQ=255) ggTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTgg < 2:1543421/151‑1 (MQ=255) ggTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTgg < 1:409683/151‑1 (MQ=255) aaaaTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑TGACTCCCATAAAC‑GCT‑AACTTTAAGGGTGGGGGA‑TTACGCCTGATATGATTTAAAGTGGCGATGAATTATTCTCACGATAAATGGTTAGGAATTCTGGcccc > 2:924768/1‑150 (MQ=255) aaaTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACATAAAGGGTGTGGTA‑TTACGCCTGGTATTATTTAAAGTGCCGATGAAATACTCTCACGATAAATGGTCAGCAATTTTGGccc > 4:243918/1‑149 (MQ=255) aTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑GCACTCCCATAAAC‑GCT‑AACTTAAGGGGTGTGGGG‑TTAAGCCCGGTATTATTTTAACTGCCGATGAATTAATTTCACGATAAATGGGCAGGAATTCttggcc > 2:1256521/1‑142 (MQ=255) aGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTg < 2:135452/151‑1 (MQ=255) tggTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑TCACTCCCATAAGCGGCA‑AACTT‑AGGGGTGTGGGA‑TTAAGCCCGATATGATTTAAAGTGCCGATGAATTACTTTCACGATAAATGGTTAGCAATTTTGGCCCCTAtt > 4:76461/2‑149 (MQ=255) gggTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTgg < 1:433312/151‑1 (MQ=255) ggTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGt < 1:1694154/151‑1 (MQ=255) gTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGAGATTCCCTCCCA‑AAAC‑GCC‑AAATTTACAGGTGTGGGA‑TTTCGTACGGTATGATTTAACGTGACGGCGAAATAATCTTCCGATAAATTGTAAGCAATTCTgtaccctcttgg > 1:757748/1‑138 (MQ=255) tGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑ACCATCCCCTAAAC‑GCT‑AAATTAAAGGGTTTGGGA‑TTTACCCTGGTATTATTTTAAGTGCCGGTGAATTACTCTCACCCTAAATGGGCCGCAAATCTAGCCCCTATTTGt > 1:1589066/1‑149 (MQ=255) cGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGc < 2:184134/151‑1 (MQ=255) gAAGATATGCGAGCACCTGTAAAGTGGCGGGGG‑ACACCCCCCTAAAA‑GCC‑AACTTAAGGGGTGTGGTA‑TTACGCCTGATATTATTTAAAGTGCCGATGAATTACTCTCACGAAAAATAGTCAGCAAATTTTGCCCATTTTTGTAAGacc > 2:1543482/1‑149 (MQ=17) gAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCCTAAAC‑GCT‑AACTTAAAGGGTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAATGGTCAGCAATTTTGGCCCCTATTTGTAAGccc > 2:365086/1‑149 (MQ=17) aaGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCACAAAC‑GCT‑AACTTAAAGGGTGTGGGG‑TTTCGCCTGATATGATTTAACGTGCCGCCGAAATAATCTCCCCATAAATGGTCAGCAATTCTTGCCCCTATTTGTAAAccc > 4:593940/1‑148 (MQ=17) aaGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCAATCCCCTAAGC‑CCC‑AAATTTAGGGGTGTGGGA‑TTTTGCCTGATAAGATTTAAAGTGCCGGTGAATTAATCTTACGATAAATAGTCCGCAATTCTTGGCCATATTGGTaaagcc > 3:530016/1‑144 (MQ=255) aGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTTCCCTAAGC‑ACG‑CACATAAGGGGGGTGGGA‑TTAAGGCTGTTATGATTTTACAAGCCGGTGAATTACTCTCCCTATAAAAGGTGAGCAATTTTTTCCCCTAATTGTAAGacc > 3:121798/1‑147 (MQ=255) aGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaag < 4:334766/151‑1 (MQ=255) gATATGCGAGCACCTGTAAAGTGGCGGGGA‑GTACACCCCCAAGC‑GCC‑TAATTCAGGGGTGGGGGG‑TTATCCCTTGTATGAGTTAACGCGCCGAAGAATTTATCTCACTACAACACGTCTGCAAGTCTGGTCCCTATTgcgtagtgcacca > 3:581843/1‑138 (MQ=255) atatGCGAGCACCTGTAAAGTGGCGGGGG‑TTACTCCCCTAAAC‑GCC‑AACTTAAAGGGTGTGGGG‑TTTCCCCTGATATTATTTTAAGTGCCGGTGAAATAATCTCACGATAACTTGTCAGCAAATCTTGCCCCTATTTGGAAGACCgaa > 2:1686576/1‑148 (MQ=255) atatGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaagaa < 1:964629/151‑1 (MQ=255) atGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAAc < 4:384172/150‑1 (MQ=255) atGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACt < 1:1561499/151‑1 (MQ=255) tGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCCTAAGC‑GCT‑TAATTAAGGGGTGTGGGA‑TTATGCCTGGTATTATTTTACATGCCGATGAATTACTTTCACGATAAATTGTCAGCAATTCTTGCCCATATTTGTAAGCCCggagaa > 2:1452242/1‑148 (MQ=255) tGCGAGCACCTGTAAAGTGGCGGGGA‑TCACCCCCCTAAGC‑GCT‑AACTTTAAGGGTGGGGGG‑TTAAGCCTGATATTAATTTAAGTGCCGGTGAATTAATCTCACGATAAATTGGCAGCAAATTTGGGCCCTATTTGTAAAACCgaagaa > 4:451512/1‑148 (MQ=255) gCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCCTAAAC‑GCT‑AACTTAAAGGGTGTGGGA‑TTACGCCTGATATGATTTTACGTGCCGATGAATTACTCTCACGATAAATGGTCAGCAATTCTTGCCCCTATTTGTAAGCCCGAAGAACTgg > 2:1564771/1‑151 (MQ=17) gCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTgg < 2:170319/151‑1 (MQ=255) gCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATAc < 1:1609414/151‑1 (MQ=255) ccTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACtt < 2:459354/150‑1 (MQ=255) ccTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTc < 3:209243/151‑1 (MQ=255) aaaGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCAc < 2:1296883/151‑1 (MQ=39) gTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTa < 1:1527185/151‑1 (MQ=37) gTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTa < 2:1273469/151‑1 (MQ=37) gCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATg < 2:1208264/151‑1 (MQ=34) gCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATg < 4:517447/151‑1 (MQ=34) cGGTGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTAAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGc > 1:66559/1‑151 (MQ=18) gggA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCg < 4:521751/151‑1 (MQ=33) ggA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCgg > 1:1453868/1‑151 (MQ=33) tCACTCCCATAAGC‑GCT‑AACTTAAGGGGTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCgggg > 1:908042/1‑150 (MQ=17) cACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGct < 1:243126/151‑1 (MQ=31) cACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGct > 2:1105355/1‑151 (MQ=31) | ATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGA‑TCACTCCCATAAGC‑GCT‑AACTTAAGGGTTGTGGTA‑TTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCT > NC_000913/15261‑15534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |