| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,097,392 | 1 | . | G | 41.5% | 42.0 / 137.2 | 65 | intergenic (+563/+173) | ycdU/serX | putative inner membrane protein/tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base . (12/26); new base G (4/23); total (16/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.89e-02 | |||||||||||
CACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTT‑GTCGAACCCCGG > NC_000913/1097255‑1097486 | cACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTg < 2:1058228/149‑1 (MQ=11)cACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTg < 2:25563/149‑1 (MQ=11) cGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑Tg‑ggggggggtgcgcacccc > 1:810979/1‑140 (MQ=11) cGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCGCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACt < 1:1357518/147‑1 (MQ=17) gTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑Gg‑gggggggggttggaccccc > 2:981232/1‑139 (MQ=1) ttCACGGTCTGTCCAACTGGCTGTCGCCATTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACtc < 1:562378/146‑1 (MQ=18) tCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACtcgctt < 2:594949/150‑1 (MQ=9) cACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGGTTGAGtcccct > 2:48806/1‑144 (MQ=9) aCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGGG‑GGGGGGGGTTTGCtcgcttcgc > 2:1718930/1‑151 (MQ=11) cGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTGCGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTtcgctc < 2:336188/151‑1 (MQ=18) cGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGT‑GGT‑GA‑GGGGGGGATTGACTCGCTtcgctc > 1:2656/1‑151 (MQ=18) cGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGAAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTtcgctc < 1:1222970/150‑1 (MQ=16) ggTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGGTTGACTCCCCccgctc > 2:1533363/1‑150 (MQ=255) gTCTGTCCAACTGGCTGTCGCCAGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTtcgctcg < 2:1008746/151‑1 (MQ=9) gTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGGTTGAcacccccccctccc > 4:560079/1‑138 (MQ=255) gTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTtcgctcgc < 3:18647/151‑1 (MQ=33) gTCCAACTGGCTGTCGCCAGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGcc < 4:432720/149‑1 (MQ=9) gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTg < 2:866453/151‑1 (MQ=33) tCCAACTGGCTGTCGCCTGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTtcgctcgc < 1:1040810/147‑1 (MQ=9) ccAACTGGCTGTGGCCAGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGc < 2:115679/151‑1 (MQ=9) aaCTGGCTGTCGCCAGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCgg < 3:528189/151‑1 (MQ=9) aaCTGGCTGTCGCCAGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCggg < 2:1130624/151‑1 (MQ=14) cTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGG‑GA‑GGGGGGGGTTGACTCGCTTCGCCCGCCCCGCCGGcc > 2:979253/1‑150 (MQ=255) ggCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCa < 2:1409130/149‑1 (MQ=33) gCTGTCGCCAGTTGTCGAACCCCGGACGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTACGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCa < 2:1221839/148‑1 (MQ=18) gTCGCCAGTTGTCGGGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGccc < 1:1282882/150‑1 (MQ=9) gTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCg < 2:1017470/150‑1 (MQ=33) gTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGc < 3:272871/151‑1 (MQ=33) cGCCAGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGccc < 1:1699087/148‑1 (MQ=9) cGCCAGTTGCCGAACCCCGGTCGCGGCTTCTCGCCCCCCCGGTGTGTGCAATATTCGAAAAAAAAGCCCTTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTc < 1:473732/151‑1 (MQ=11) ccAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCAc < 2:669107/151‑1 (MQ=33) aGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACt < 1:1547391/151‑1 (MQ=9) aGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACt < 1:1043576/151‑1 (MQ=9) aGTTGTCGAGCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACt < 2:152099/151‑1 (MQ=9) cGAGCCCCGTTCGGGGCTTCTCATCCCCCCGGTGTTTGCAATATACGAAAAAAAAGCCCGTTCTTTCGTTCGAGCTCTTCTTTAAATATGGC‑GGT‑TAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTc < 3:114423/151‑1 (MQ=11) cGAGCCCCGCTGGGGGGTTCCGGTCCCCCCGGTGTGTGCAATATACGAAAAAAAAGGCCGTTCTTTCGGACGAGCTCTTCTTTAAAAATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGt < 1:701590/149‑1 (MQ=11) cGAACCCCGGTCGGGGCTTCTCATCCCCCCGTTGTGTGAAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTCCTTTAAATATGGC‑GGT‑AA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCa < 1:467533/151‑1 (MQ=255) cGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTc < 2:350876/150‑1 (MQ=33) agccccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGGG‑GGGGGGGGGTGACTCGCTTCCCCCCCCCCGCGGGGAAcccccccccctcgtt > 3:485482/3‑136 (MQ=11) gccccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg < 2:1533406/150‑1 (MQ=14) ccccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCAc < 4:300778/148‑1 (MQ=31) ccccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt < 2:1096375/151‑1 (MQ=31) cctggTCGGGCCTTTTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACgg < 1:1480167/147‑1 (MQ=255) ccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTc < 3:61414/151‑1 (MQ=14) cGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCt < 3:236899/151‑1 (MQ=14) tCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGGATGAATCGCTTCGCTCGCCCCGCCGGCAGCCCGCGCACTggg > 1:1328917/1‑135 (MQ=11) cGGGGCTTCTTATCCCCCCGGTGTCTCTAACATTCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACgg < 4:483088/143‑1 (MQ=11) cGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGGTTGAATCGCTTCGCTCGCCCCCCGGGCAGCCCCCCCACCCCGTTCACCGGCTGt > 2:1357666/1‑149 (MQ=11) cGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTcaa < 2:518649/151‑3 (MQ=14) ggCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGGCCGTACTTTCGGACGAGCTCTTCTTTAAAGATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAAc < 1:7929/151‑1 (MQ=255) ttCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGt < 4:373007/132‑1 (MQ=17) tctcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGAACCGCCTCGCCCCCCCCCCGCGCGCCCCCCCCCCCGCGTTCACGGTGTGTccca > 1:1608104/1‑144 (MQ=11) tctcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTgg < 2:1736425/149‑1 (MQ=31) ctcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGGTTGAATCCCCTCGCTCGCCCTGCCGGCAGCCCCCTCACCGCGTTCACCGTCTGTTCCACTgg > 2:1448566/1‑148 (MQ=11) tcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGG‑GA‑GGGGGGGAGTGAATATCTCCGCTCGCCCCGCCGGCCGCCCCCCCACTGCGGTCACGGCCTGttc > 1:1314335/1‑140 (MQ=11) cATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCt < 2:621095/149‑1 (MQ=14) tCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGGGTGACTCGCCTTGCTCCCCCTCCGGGCAACCCCCTCTCTGCGGTCACTGCCGGTCCCACCGGCAGTCGc > 2:1314191/1‑151 (MQ=11) cccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCa < 2:911066/151‑1 (MQ=31) ccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTTCTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCa < 1:391832/151‑1 (MQ=2) ccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTGCTTACGACTTCTTCTTTAAATATGGC‑GGT‑GC‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAg < 1:654572/151‑1 (MQ=2) ccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTCCGTACGGGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAg < 1:25602/151‑1 (MQ=11) gtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTT‑GTCGaa < 2:1215460/151‑1 (MQ=11) atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGGG‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTT‑GTCGAACCCCg < 1:1645472/151‑1 (MQ=9) atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTT‑GTCGAACCCCg < 2:845484/151‑1 (MQ=14) tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACGCCCCGCGCTCTCCCCTCGGGCAGCCCCCCCCCCGCGTTCCCGGTCCTTTCAACCGGCTGCGGCCCGGT‑GGCCAAccccc > 1:1418811/1‑148 (MQ=2) ataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGGTTGACTCGCCTCGCTCGCCCCGCGGGCAGCCCCCCCACTGCGTTTCCGGTCTGTCCAACTGGGTGTCGCCCGTT‑GTCGGACCCCgg > 2:158656/1‑150 (MQ=11) taCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GAGGGGGGGGGTTGACTCGCCTTCCCCCCCCCGCGGGCAGCCCCCCCACCGCGTTCAAGGGCTGGTCAACCCGCCGTTGCCCGTTGGTCGAACCCCg > 2:467607/1‑149 (MQ=2) | CACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGT‑GA‑GGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTT‑GTCGAACCCCGG > NC_000913/1097255‑1097486 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |