Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913599,5760TG43.8% 185.1 / 46.1 112V288G (GTG→GGG) cusAcopper/silver efflux system, membrane component
Reads supporting (aligned to +/- strand):  ref base T (9/54);  new base G (49/0);  total (58/54)
Fisher's exact test for biased strand distribution p-value = 7.42e-23
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 118 total aligned reads displayed.

ACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCT  >  NC_000913/599428‑599726
                                                                                                                                                     |                                                                                                                                                      
aCGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGggtg                                                                                                                                                       <  1:1331049/150‑1 (MQ=255)
  gCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGgggggggg                                                                                                                                                    >  3:283812/1‑149 (MQ=255)
     cgacgaCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATc                                                                                                                                                 >  3:1014454/1‑151 (MQ=255)
      gacgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATcc                                                                                                                                                >  3:293828/1‑151 (MQ=255)
       acgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCt                                                                                                                                               <  3:333069/151‑1 (MQ=255)
         gacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGTcc                                                                                                                                                >  3:4372/1‑148 (MQ=255)
          acTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCCGGGGGGGGGATc                                                                                                                                                 >  3:237827/1‑147 (MQ=255)
           cTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑GGGGGGGGTGGTCCTGc                                                                                                                                             >  1:726152/1‑149 (MQ=255)
           cTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑GGGGGGGGGGAttc                                                                                                                                                >  4:143388/1‑144 (MQ=255)
           cTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCg                                                                                                                                            <  1:1019540/150‑1 (MQ=255)
             ttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGAt                                                                                                                                          <  4:251882/150‑1 (MQ=255)
             ttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGAt                                                                                                                                          <  3:1318573/150‑1 (MQ=255)
              tAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGTCCTGCGATcc                                                                                                                                        >  4:467802/1‑151 (MQ=255)
                aTCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCgg                                                                                                                                      <  3:795764/151‑1 (MQ=255)
                aTCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGTGGTCCTGCGCTcc                                                                                                                                        >  3:235093/1‑149 (MQ=255)
                 ccacaTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGTCCTGCGATCCgg                                                                                                                                      >  4:203513/2‑150 (MQ=255)
                  cacaTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGc                                                                                                                                     <  3:1206958/150‑1 (MQ=255)
                     aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGTGGGACTGCGATCCgg                                                                                                                                      >  1:792958/1‑146 (MQ=255)
                        gTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGTCCTGCGATCCGGCcaaaa                                                                                                                                >  1:791263/1‑149 (MQ=255)
                        gTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATCCTGCGATCCGGCaaaaa                                                                                                                                >  2:421241/1‑149 (MQ=255)
                            tAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGccc                                                                                                                           <  1:440565/150‑1 (MQ=255)
                            tAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGccc                                                                                                                           <  2:26237/150‑1 (MQ=255)
                              aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑GGGGGGGGGGGTCCTGCGGTCCGGGAAAAACGccc                                                                                                                           >  1:41101/1‑148 (MQ=255)
                               aaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCgaga                                                                                                                       <  3:708162/151‑1 (MQ=255)
                               aaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGTGGTACCGTGATCCGGCaaaaaaaccc                                                                                                                           >  4:525186/1‑142 (MQ=255)
                               aaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGCGGCGGG‑GGGGGGGGGGGTCCTGCGAGCCGGCaaaaa                                                                                                                                >  4:353840/1‑142 (MQ=255)
                                aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGaa                                                                                                                      <  1:555249/151‑1 (MQ=255)
                                 gCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAg                                                                                                                     <  2:323199/151‑1 (MQ=255)
                                 gCCAGTGAAAATGGCGTGCCCGGTTATCTGCGCGATGTTGCGAAGGGCCAGATTGGGCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CCGGGGGGGGGTCCTGCGTAACCGCAAAAACGcccc                                                                                                                          >  4:498032/1‑145 (MQ=255)
                                    aGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGa                                                                                                                  <  4:214414/151‑1 (MQ=255)
                                     gTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGAt                                                                                                                 <  2:312589/151‑1 (MQ=255)
                                       gAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATc                                                                                                                <  3:882176/150‑1 (MQ=255)
                                        aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATcgc                                                                                                              <  1:1147274/151‑1 (MQ=255)
                                         aaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATcgcc                                                                                                             <  3:326687/151‑1 (MQ=255)
                                           aTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGTCCCGCGGTCCGGCAAAAAAGCCCCAGAAGGGATcgccgc                                                                                                           >  1:1017469/1‑151 (MQ=255)
                                                  gCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGaa                                                                                                     <  2:441186/150‑1 (MQ=255)
                                                   cccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATCCTGCGGTCCCGCAAAAAAGCCCCGGAAGTGATCGCCGCCGTGAAgg                                                                                                   >  3:1329587/1‑151 (MQ=255)
                                                   cccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATCCTGCGATCCGGCAAAAAAGCCCGAGAAGAGATCGCCGCCGGGAAgg                                                                                                   >  3:39402/1‑151 (MQ=255)
                                                    ccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGa                                                                                                  <  3:540038/151‑1 (MQ=255)
                                                     cGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATCCTGGGGTCCGGCAAAAACGCCCGGGAAGGGGTTGCCGGCGTGGAgg                                                                                                   >  1:635862/1‑149 (MQ=255)
                                                      gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGTCCCGCGATCCGGGAAAAACGCCCGAGAAGTGATCGCCGCCGGGAAgg                                                                                                   >  3:309610/1‑148 (MQ=255)
                                                      gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGCCCCGCGAGCCCGCCAAAACGCCCGGGAAGGGATCGCCGCCGCGAAgg                                                                                                   >  3:887817/1‑148 (MQ=255)
                                                       tttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGTCCTTCGATCCGGCAAAAAAGCCCGAGAAGGGATCGCCGCCGTGAAgg                                                                                                   >  1:246166/1‑147 (MQ=255)
                                                          aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAAc                                                                                             <  3:664129/150‑1 (MQ=255)
                                                          aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGTCCCGCGATCCGGCAAAAAAGCCCGAGAAGGGATCGCCGCCGGGAAGGAaaaa                                                                                              >  1:366937/1‑149 (MQ=255)
                                                          aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑AGGGGGGGGGGTCCTGCGATCTGGCAAAAACACCCCGGAAGGGAGCGCCGCCGTGAAGGACaaa                                                                                              >  1:760775/1‑149 (MQ=255)
                                                           tCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATCCTGCGGTCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAACt                                                                                            >  3:61250/1‑150 (MQ=255)
                                                               cgcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGaaa                                                                                       <  4:210949/151‑1 (MQ=255)
                                                                gcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGTGATCCTGCGATCCGGCAAAAAAACCCGGGAAGAGATCGCCGCCGCGAAGGACAAACTGGaaa                                                                                       >  3:306971/1‑150 (MQ=255)
                                                                 cgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATCCTGCGGTCCGGCAAAAAAGCCCGAGAAGGGATCGCCGCCGGGGAAGACAAAACGGaaa                                                                                       >  1:559989/1‑149 (MQ=255)
                                                                  gATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGTCCTGCGGTCCGGCAAAAAAGCCCGAGAAGGGATCGCCGCCGTGGAGGACAAACCGGaaa                                                                                       >  1:831742/1‑148 (MQ=255)
                                                                     gTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTg                                                                                  <  1:891124/150‑1 (MQ=255)
                                                                       tGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGaa                                                                                <  1:306945/150‑1 (MQ=255)
                                                                        gCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGaaaa                                                                              <  3:965108/151‑1 (MQ=255)
                                                                            aGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGGGGTCCTGCGCTCCGGCAAAAAAGCCCGGGAAGAGATCGCCGCCGGGAAGGGCAAACTGGAAACGCTGgaaa                                                                              >  2:43559/1‑147 (MQ=255)
                                                                             ggTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGGGATCCTTCGCTTCGGCCAAAAAGCCCAAGAAGTGATTGCCGCCGTGAGGGAACAACTGGAGAAGGTGAAAagtagt                                                                         >  1:111252/1‑151 (MQ=255)
                                                                                  aGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGcc                                                                    <  3:1408707/151‑1 (MQ=255)
                                                                                  aGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATCCTGCGATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGcc                                                                    >  3:1120900/1‑151 (MQ=255)
                                                                                   gATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCg                                                                   <  1:1321842/151‑1 (MQ=255)
                                                                                   gATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCg                                                                   <  3:963262/151‑1 (MQ=255)
                                                                                   gATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGTCCTGCGATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGGGAAGGACAAAATGGAAACGCCGAAAAGAAGGCTGcc                                                                    >  1:903335/1‑150 (MQ=255)
                                                                                    aTTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCgg                                                                  <  2:490326/151‑1 (MQ=255)
                                                                                       ggCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAg                                                               <  1:1268615/151‑1 (MQ=255)
                                                                                        gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAgg                                                              <  3:300135/151‑1 (MQ=255)
                                                                                        gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATCCTGCGATCCGGCAAAAACGCCCCGGAAGGGAACGCCGCCGGGAAGGACAAACTGGGAACGCTGAAAAGGAGTCTGCCGGGAgg                                                              >  3:792015/1‑151 (MQ=255)
                                                                                          ccGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCg                                                            <  3:1077772/151‑1 (MQ=255)
                                                                                           cGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑GGGGGGGGGGGTTCTGCGATCCGGCAAAAAAGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACACTTAAAAAGAGTCTGCCGGAAGGCg                                                            >  4:297603/1‑150 (MQ=255)
                                                                                             gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTgg                                                         <  3:354560/151‑1 (MQ=255)
                                                                                              agaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATTCTGCGCTCCCGCAAAAAAGCCCGCGAAGTGGTCGCCGCCGTGGAGGACAAACTGGAAAAGCTGGAAAGAAGTCTGCCGGGAGGCgggg                                                         >  1:7801/1‑150 (MQ=255)
                                                                                               gaTGCGCCGGGGCATTGCCGAACTAACCGGCGAAGGCGAAGTGCCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACGGGAAACGCTGAAAAGTAGTCTGCCGGAAGGTGTGga                                                        <  3:1268695/150‑1 (MQ=255)
                                                                                               gaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGga                                                        <  3:37123/150‑1 (MQ=255)
                                                                                                  gcgcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGGTCCTTCGATCCGGCAAAAAAGCCCGAGAAGGGATTGCCGCCGGGGAGGACAAACTGGAAACGCCGAAAAGGAGGCTGGCGGAAGGGGGGGGGAt                                                     >  4:351589/1‑150 (MQ=255)
                                                                                                            aTTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACAt                                          <  1:1400524/151‑1 (MQ=255)
                                                                                                            aTTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACAt                                          <  2:306227/151‑1 (MQ=255)
                                                                                                               gCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATAc                                        <  2:124814/150‑1 (MQ=255)
                                                                                                                ccGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGTGATCCTGCGATCCGGCCAAAACGCCCGAGGAGTGGTCGCCGCCGGGAAGGACAAACTGGAAACGCTGAAAAGGAGTCTGCCGGAAGGCGGGGGGGTAGTTACAACATAc                                        >  1:927919/1‑149 (MQ=255)
                                                                                                                 cGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATTCTGCGCACCGGCAAAAAAACCCGGGAAGGGGTTGCCGCCGTGGTGGGCAAACAGGGAACGCTGAAAAGAAACCTTCCGGGAGGCGGGGGGGTAGATTCAAAATACGa                                      >  3:1243415/1‑150 (MQ=255)
                                                                                                                 cGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGAt                                     <  1:45707/151‑1 (MQ=255)
                                                                                                                 cGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATCCTGCGATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAACTGGAAACGCCGAAAAGTAGTCTGCCGGGAGGCGGGGGGATAGTTACAACATa                                         >  3:44123/1‑147 (MQ=255)
                                                                                                                    aCTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGc                                  <  1:7623/151‑1 (MQ=255)
                                                                                                                        aaCGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATCCTGCGATCCGGCAAAAAAGCCCGAGAAGGGATCGCCCCCGGGAAAGACAAAATGGAAAAGCTGAAAAAAAGTCTGGCGGGAGGCGGGGGGAGAGTTACAAAATa                                         >  1:1014113/1‑140 (MQ=255)
                                                                                                                          cGGCGAAGGCGAAGTGGCGGG‑GGGGGTGGTGATCCTGCGGTCCGGCAAAAACGCCCGCGAAGTGATCGCCGCCGGGAAGGACAAACTGGGAACGCTGAAAAGGAGTCTGCCGGGAGGCGGGGGGATAGTTACAACATACGATCGcagcc                              >  1:569908/1‑149 (MQ=255)
                                                                                                                          cGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagcca                             <  1:4372/150‑1 (MQ=255)
                                                                                                                          cGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGGGCTCCTGCGTTCCGGCAAAAAAGGCCGAGAAGGGGTCGCCGCCGCGGAGGGCAAACTGGAAACGCTGCAAAGCGGTCCGCCGGGGGGCGGGGAGATAATTTCAACAGACGGGCCcagccc                             >  1:1228075/1‑149 (MQ=255)
                                                                                                                          cGGCGAAGGCGAAGTGGCGGG‑CGGGGGGGGGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGGGGAGATAGGTACAACATACGATCGcagcc                              >  2:476838/1‑149 (MQ=255)
                                                                                                                              gaaggcgaagTGGCGGG‑CGGGGTGGTGATCCCGCGATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTTTGCCGGAAGGCGGGGAGATAGTTACAACATACGATCGCAGCCAGCTc                         >  1:1036718/1‑150 (MQ=255)
                                                                                                                              gaaggcgaagTGGCGGG‑CGGGGGGGTGATCCTTCGATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGGGAAGGACAAAATGGAAAAGCTGAAAAGGAGTCTGCCGGGAGGCGGGGAGATAGTTACAACATACGATCGcagcc                              >  1:509206/1‑145 (MQ=255)
                                                                                                                               aaggcgaagTGGCGGG‑CGGGGGGGGGGTCCTGCGGTCCGGCAAAAACGACCGGGAAGAGATCGCCGCCGTGAAGGAGAAACCGGAAACGCTGAAAAGTAGTCTGGCGGAAGGGGGGGGGATAGTTTTAAAATACGGTCGcagccag                            >  1:601807/1‑146 (MQ=255)
                                                                                                                                aggcgaagTGGCGGG‑CGGGGGGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGGGATAGTTACAACATACGATCGCAGCCAGCTCAtt                      >  3:462998/1‑151 (MQ=255)
                                                                                                                                    gaagTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGAcc                  <  1:312558/151‑1 (MQ=255)
                                                                                                                                       gTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACcgcg               <  1:1383029/151‑1 (MQ=255)
                                                                                                                                          gcggg‑cggGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGcc             >  1:1106496/1‑150 (MQ=255)
                                                                                                                                          gcggg‑cggGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGcc             >  3:513757/1‑150 (MQ=255)
                                                                                                                                          gcggg‑cggGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCa            <  2:225737/151‑1 (MQ=255)
                                                                                                                                            ggg‑cgggGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCAt           <  1:1015869/150‑1 (MQ=255)
                                                                                                                                             gg‑cgggGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCg         <  3:40402/151‑1 (MQ=255)
                                                                                                                                                  gggTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACaa     <  1:996530/151‑1 (MQ=255)
                                                                                                                                                   ggtggtGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACaa     >  3:757964/1‑150 (MQ=255)
                                                                                                                                                    gtggtgATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAAcc   <  3:105235/151‑1 (MQ=255)
                                                                                                                                                     tggtgATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCt  >  4:182027/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
ACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGG‑CGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCT  >  NC_000913/599428‑599726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑