Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,412,898	0	C	T	46.0%	45.9 / 68.2	74	A190T (GCC→ACC)	acrS	acrAB operon transcriptional repressor
Reads supporting (aligned to +/- strand):  ref base C (32/8);  new base T (0/34);  total (32/42)
Fisher's exact test for biased strand distribution p-value = 1.27e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01

CCACTAAAACTGGTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGACACGCCTGCAATACTTCGCGG  >  NC_000913/3412750‑3413046                                                                                                                                                      |                                                                                                                                                     ccACTAAAACTGGTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCt                                                                                                                                                     <  2:336352/150‑1 (MQ=255)     tAAAACTGGTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGTACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGttt                                                                                                                                                >  2:1197645/1‑151 (MQ=255)        aaCTGGTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTtata                                                                                                                                             <  2:350263/151‑1 (MQ=255)         aCTGGTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTtata                                                                                                                                             >  2:616143/1‑150 (MQ=255)           tGGTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATaa                                                                                                                                            >  2:400069/1‑149 (MQ=255)               tAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATc                                                                                                                                       >  2:662526/1‑150 (MQ=255)                aaCTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGTACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCAt                                                                                                                                     <  1:1197614/151‑1 (MQ=255)                    gtgACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAAc                                                                                                                                  <  2:182134/150‑1 (MQ=255)                      gACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAAccc                                                                                                                                <  2:71651/150‑1 (MQ=255)                      gACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCg                                                                                                                               <  2:357496/151‑1 (MQ=255)                      gACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCg                                                                                                                               >  1:1184209/1‑151 (MQ=255)                                aTTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCAt                                                                                                                     >  1:429570/1‑151 (MQ=255)                                 ttttCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCAtt                                                                                                                    >  1:468891/1‑151 (MQ=255)                                 ttttAAGGAAAGAATGTAATTTTACATGACTTTAAATTCATTCTTTTAATAAATTAATTTCTTTTTTTTTTCATTTGGCATAAACATTCTTAAT‑ACGTTATCGACCAGGGCGGGGTTTTTTTTATAAAGATCATACCCCGCCATATTCAt                                                                                                                     <  1:1199111/150‑1 (MQ=255)                                 ttttAAGAAAAGAATGTAAATTTACATGACACTTAATTCATTCGTTTGATAAATTATTTTCTTTTTGTTTTCTTCTGGCATAAACATTCTTAAT‑ACTTTCTCGACCAGGGGGGGGGTTTGTTTAAAAAGATCATACCCCGCCATATTCa                                                                                                                      <  1:787270/149‑1 (MQ=255)                                  tttCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCAtt                                                                                                                    >  1:164561/1‑150 (MQ=255)                                   ttCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTa                                                                                                                   >  2:923209/1‑150 (MQ=255)                                    tCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAAc                                                                                                                 >  2:510266/1‑151 (MQ=255)                                      aGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAAcc                                                                                                                >  1:378344/1‑150 (MQ=255)                                           aaaaTGTAATTTTACATGACATTTATTTCATTGTTTTTATAAATTATTTTCTTTATTTTTTCATCTGGAATAAACATTTTTAAT‑CGTTTACCGCCAGGGGGGGGGGTTTGTTTAAAAAAATCATAACCCGCCATATTCATTAACCAGttt                                                                                                           <  2:667997/148‑1 (MQ=255)                                           aaaaTGTAATTTTACATAACTTTTAATTCATTCTTTTGAGGAATTATTTTCTTTATTTTTTCATCGGAAATGAACTTTTTTAAT‑CCTTTATCGACCAGAGGGGGGTTTTTTTTATAAAGATAATAACCCGCCATATTCATTAACCAGtttt                                                                                                          <  1:1098061/149‑1 (MQ=255)                                               tttaaaTTTACATGACTCTTAATTCATTTTTTTAATAAATTATTTTCTTTTTTTTTTCTTCTGGCATAAACATTCTTATT‑ACGTTATCGCCAAGAGGGGGGGTTTTTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGa                                                                                                        <  2:633103/145‑1 (MQ=255)                                                  gAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAAt                                                                                                   >  2:243644/1‑151 (MQ=255)                                                   aaTTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAAtt                                                                                                  >  1:593151/1‑151 (MQ=255)                                                   aaTTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTAT‑AAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTc                                                                                                 >  2:827670/1‑151 (MQ=255)                                                     tttACATGACTTTTAATTTTTTTTTTTGATAAATTATTTTGGTTATTTTTTCATCGGGTATAACCTTTCTTAAT‑ACTTTATCGACCAGGGGGGGGGTTTTTTTAAAAATATCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTc                                                                                                 <  2:986249/150‑1 (MQ=255)                                                       tACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGc                                                                                              >  1:976549/1‑151 (MQ=255)                                                        aaaTGACTTTTAATTTTTTGTTTTGATGATTTAATTTCTTTTTTTTTTTATCTGGTATAAACTTTATTAAT‑TCGTTCCCGCCCAGGGCGGGGTTTTTTTTAAAAAAACCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCg                                                                                               <  1:602220/147‑1 (MQ=255)                                                        aaaTGACATTTAATTCATTCTTTTGATAAATTAATTTCGTTATTTTTTCATCTGGAATAAACATTTTTAAT‑ACTTTATCGACCAGAGGGGGGTTTTGTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCt                                                                                             <  2:924485/149‑1 (MQ=255)                                                        aCATGACATTTAATTCATTCTTTTAATAAATTAATTTCTTTATTTTTTCATCTGGCATAAACATTCTTAAT‑ACTTTATCGACCAGGGGGGGGGTTTTTTTAAAAAGATCAAAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGc                                                                                              <  2:1062363/150‑1 (MQ=255)                                                         cATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCt                                                                                             >  1:540503/1‑150 (MQ=255)                                                            gccacTTAATTCTTTCTTTTGATGAATTATTTTTTTTTTGTTTTCATCTGGAATAAACATTTTTAAT‑ACTTTACCGCCCAGGGCGGGGTTTTTTTTAAAAAGATCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAg                                                                                         <  2:1138665/149‑1 (MQ=255)                                                            gACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGa                                                                                           >  2:960340/1‑149 (MQ=255)                                                              ctcTTATTTCTTTCTTTTGATAAATTATTTTCGTTTTTTTTTCTTCTGGTATGAACATTCTTATT‑ACTTTATCGACCAGAGGGGGGTTTTTTTTAAAAAGATAATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAg                                                                                         <  2:456157/147‑1 (MQ=255)                                                                cTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCAc                                                                                     >  1:831535/1‑151 (MQ=255)                                                                cTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCAc                                                                                     >  1:844943/1‑151 (MQ=255)                                                                 ttATTTCATTTTTTTAATAAATTATTTTTTTTTTTTTTTCTTTTGGAATAAACTTTCTTAAT‑CCTTTATCGACAAGGGGGGGGGTTTTTTAATAAAGATAAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCAc                                                                                     <  1:476205/150‑1 (MQ=255)                                                                   aaTTCATTCTTTTGATGAATTATTTTCGTTATTTTTTCATCTGGCATAAACATTCTTAAT‑ACTTTATCGACAAGAGGGGGGTTTTTTTTATAAAAACCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCAt                                                                                  <  1:1186314/151‑1 (MQ=255)                                                                         tttgTTTGAAAAATTATTTTCTTTATGTTTTCATCTGGCATAAACATTCTTAAT‑CCGTTACCGACCAGGGGGGGGTTTTTTTAAAAAAAATCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaat                                                                              <  1:820040/146‑1 (MQ=255)                                                                         ttggTTTGATAAATTATTTTCTTTATTTTTTCATTTGGAATAAACATTTTTAAT‑TCGTTATCGCCCAGAGGGGGGTTTTGTTAAAAAAGATCAAAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaata                                                                             <  1:466209/147‑1 (MQ=255)                                                                          tcGTTTAATAAATTATTTTCGTTATTTTTTTATCTGGCAAAAACATTCTAAAT‑CCTTTAGCACCCAGGGGGGGGGTTTGTAAAAAAAGATCAAAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCa                                                                                      <  1:120404/140‑1 (MQ=255)                                                                             tttGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataataat                                                                        >  1:181043/1‑151 (MQ=255)                                                                              ttGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatc                                                                       >  1:776020/1‑151 (MQ=255)                                                                              ttGATAAATAAATTTCTTTTTTTTTTCCTCTGGAATGAACTTTTTTAAT‑CCTTTATCCACAAGAGGGGGGTTTTTTTTATAAAACTCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataat                                                                           <  2:264777/147‑1 (MQ=255)                                                                                  taaattatttTCTTTTTTTTTTCTTCGGGCATAAACTTTTTTAAT‑ACGTTATCGACCAGAGGGGGGGTTTTTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatc                                                                       <  2:92289/145‑1 (MQ=255)                                                                                    aattatttTTTTTTTTTTTTCATCTGGCATAAACATT‑TTAATAACTTTACCAACAAGAGGGGGGGTTTTTTAAAAAAAAACAAAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATcaca                                                                 <  1:379267/151‑1 (MQ=255)                                                                                    aattatttTCTTTATTTTTTCATCTGGAATAAACTTTTTTAAT‑ACGTTATCGACCAGGGCGGGGGTTTTTTTATAAAAATAATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatc                                                                       <  2:844957/145‑1 (MQ=255)                                                                                        attttCTTTATTTTTTCATTGGGCATAAACTTTTTTAAT‑ACGTTATCGCCAAGGGGGGGGTTTTGTTAAAAAAGATCAAAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCacaaca                                                              <  1:727610/148‑1 (MQ=255)                                                                                          tttCTTTTTGTTTTCATCTGCTATAAACTTTCTAAAA‑TCTTTCCCGACCGGGGGGGGGTTTTATTTAAAAAAATCATAGCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCacaac                                                               <  2:327054/147‑1 (MQ=255)                                                                                            ttttttttttttCTTCTGGCATAAACATTCTTAAT‑ACTTTATCGACCAGGGGGGGGGTTTTTTTAAAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTa                                                          <  2:729765/142‑1 (MQ=255)                                                                                            tCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTa                                                          >  1:26464/1‑150 (MQ=255)                                                                                              gTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAAt                                                       >  1:1032559/1‑151 (MQ=255)                                                                                               tttttttttCATCTGGAATAAACTTTTTTAAT‑CCGTTATCGACCAGGGCGGGGGTTTGTTTAAAAAAATCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAAt                                                       <  1:596202/145‑1 (MQ=255)                                                                                               ttATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATc                                                      >  2:481402/1‑151 (MQ=255)                                                                                                tATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCg                                                     >  1:136243/1‑151 (MQ=255)                                                                                                  ttttttCATTTGAAATAAACATTTTTAAT‑CCTTTATCGACCAGAGGGGGGTTTTTTTTAAAAAAAAAAAAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGa                                                    <  1:801281/148‑1 (MQ=255)                                                                                                  ttttttCATCTGGAATAAACATTCTTAAT‑ACGTTACCGACCAGGGGGGGGGTTTTTTAAAAAAGATCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGa                                                    <  2:183596/148‑1 (MQ=255)                                                                                                   tttttCATTTGGAATAAAATTTTTAAAT‑ACGTTATCGCCCAGGGGGGGGTTTTTTTAAAAAAAATAAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAg                                                   <  1:85091/149‑1 (MQ=255)                                                                                                   gTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAgg                                                  >  1:62186/1‑151 (MQ=255)                                                                                                    ttttCATTGGGAATAAACATTTTAAAT‑CCTTTACCACCAAGAGGGGGGGTTTGTTAAAAAAGATCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGa                                                    <  1:697656/148‑1 (MQ=255)                                                                                                    ttttCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGt                                                 >  2:679345/1‑151 (MQ=255)                                                                                                                 tGAACATTCTTAAT‑ACGTTAACGACCAGTGCGGGGGCTTTTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTAttt                                            <  1:839219/143‑1 (MQ=255)                                                                                                                    acttttttAAT‑ACTTTATCGCCAAGGGCGGGGTTTTTTTAAAAAAGATAAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACaa                                   <  1:199638/143‑1 (MQ=255)                                                                                                                    actttttaaaT‑CCGTTAACCACAAGGGCGGGGTTTTTTTTAAAAAGACAAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTaca                                      <  1:462410/138‑1 (MQ=255)                                                                                                                            aaT‑CCGTTATCAACCAGGGGGGGGTTTTTTTAAAAAAGATCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCttgt                             <  1:797265/147‑1 (MQ=255)                                                                                                                            aaT‑ACGTTACCGACCAGAGCGGGGGTTTGTTTATAAAGATAATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGc                          <  1:602617/150‑1 (MQ=255)                                                                                                                             aT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTg                        >  1:1086584/1‑151 (MQ=255)                                                                                                                                 cGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGac                      >  2:499299/1‑150 (MQ=255)                                                                                                                                  gTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGacac                    >  1:101350/1‑151 (MQ=255)                                                                                                                                   ttaccgccaagggggggggTTTTTTTAAAAAGAACAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGac                      <  1:638523/134‑1 (MQ=255)                                                                                                                                       cGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGACACGCCTg               >  2:541911/1‑151 (MQ=255)                                                                                                                                        gACAAGAGGGGGGTTTTGTTTAAAAAGAAAATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGACACGc                  <  2:605031/147‑1 (MQ=255)                                                                                                                                                 gggggCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGACACGCCTGCAATACTTcg     >  1:932182/1‑151 (MQ=255)                                                                                                                                                     gCTTTTTTAAAAATATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGACACGCCTGCAATACTTCGCgg  <  2:1183028/150‑1 (MQ=255)                                                                                                                                                      cTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGACACGCCTGCAATACTTCGCgg  >  1:708385/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CCACTAAAACTGGTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGAATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAAT‑ACGTTATCGACCAGAGCGGGGGCTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCATCACAACATCTAAATCGAGGTTATTTGCTACACAACCTTGTTGCTGACACGCCTGCAATACTTCGCGG  >  NC_000913/3412750‑3413046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑