| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,423,287 | 0 | G | C | 43.8% | 86.2 / 35.5 | 64 | intergenic (+93/+136) | yhdZ/rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| Reads supporting (aligned to +/- strand): ref base G (8/28); new base C (28/0); total (36/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.82e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGT > NC_000913/3423138‑3423434 | tttGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCg < 1:899796/150‑1 (MQ=255) cgcATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCTCCCGGCAcc > 1:694632/1‑151 (MQ=255) gcATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTTcccccccccc > 1:249695/1‑151 (MQ=255) cTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCCCCCTcc > 2:398046/1‑149 (MQ=255) agagCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTg < 1:970567/151‑1 (MQ=255) cGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTc < 1:441841/151‑1 (MQ=255) tACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCACCCTccccgcc > 2:202017/1‑136 (MQ=255) cGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGGCCCGCCCCCCCCCCCCCCGGCC‑CGTGC‑tttcca > 2:558853/1‑146 (MQ=255) gAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCTCCCCCCCCCCCCCAGGCC‑GTTGC‑TTTGcca > 1:615723/1‑148 (MQ=37) aGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑g < 2:379981/151‑1 (MQ=255) aGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCCCCCCCCCCCCCCCCGGCC‑CCTGC‑ttttcaa > 2:337043/1‑144 (MQ=25) tATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATcc < 1:629777/150‑1 (MQ=255) aGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCCCCCTCCCGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTccc > 1:536573/1‑150 (MQ=255) aaTCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCACCCTCCCGGGC‑GGTGC‑TTCCCAAC‑GTTCAAATCCCCCCCccgcgg > 1:350533/1‑151 (MQ=21) ccATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGAtt < 2:322318/151‑1 (MQ=255) ccATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCCCCCCCCCCCCGGCC‑CGTGC‑TTCTCAAC‑GTTCCAATCCGCCCCccgcggg > 2:9084/1‑148 (MQ=18) aTTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTg < 1:125086/151‑1 (MQ=255) aaTTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCACCCCCCCGGCC‑GGTTC‑TTCCCAAA‑GTTCAAAACCCCTCCccgcggggtt > 1:521849/1‑143 (MQ=18) tGAATGTTAGTTCGAAAATCAAAAAGGCCATCCTTTCGGACGGCTTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTa < 2:914923/150‑1 (MQ=255) tGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGTCCCGCCCCCCCCCCTCCCGGCC‑GTTTC‑TTCTCAAC‑CTTCAAAACCCCTccccccggggtt > 2:1004679/1‑135 (MQ=255) tGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCCCCCGGCC‑GTTGC‑TTCGCAAC‑GTTCAAAACCGCTCCCCGCGGGTTTGTCCCAc > 1:466757/1‑151 (MQ=18) gAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTTCCCCCCACCCCCCCGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATTCGCTCCCGGCGGGTTTTTCCTAc > 1:928219/1‑150 (MQ=18) gAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACt < 1:82561/151‑1 (MQ=255) aaTGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGTCCTCCCCCCCACCCCCCCGGCC‑GGTGC‑TTCTCAAC‑GGTCAAATCCCCCCCCCGCGGGCTTGTTCTACTc > 1:643640/1‑151 (MQ=255) aaTGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCCCCCTCCGGGCC‑GGTTC‑TTCTCAAC‑GTTTCAAACCGCTCCCCGCGGGttttttc > 2:960514/1‑142 (MQ=18) aTGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑g < 1:673533/151‑1 (MQ=255) tGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATAGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCGCCACCCTCCAGGCC‑GTTGG‑CTCCCAACAGTTCAAAACC‑CTCCCGGCGGGtttttgct > 1:574345/1‑140 (MQ=17) tAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGga < 1:107133/150‑1 (MQ=255) tAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCTCCCCCCCCCCCCCCGGCC‑GTTGC‑TTTGCAAA‑GTTCAAAACCGCCCCCCGCGGGGTTTTCCTACTC‑cgggg > 2:1003672/1‑149 (MQ=17) tAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCGCCCCCCCCCCCCCCGGCC‑GTTGC‑TTCCCAAA‑GGTTAAAACCCCCCCCCGCGGGTTTTTCCTTCTC‑cgggg > 2:495396/1‑149 (MQ=17) aGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGgag < 1:644594/150‑1 (MQ=255) aGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCGCCACCCTCCCGGCC‑CGTGCTTTCCAAAC‑GTCCAAATCC‑CTCCCCGCGGGGTTGTCCTTCTC‑cgggg > 2:601658/1‑148 (MQ=17) gAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCCCCCCCCCGGCC‑GTTGC‑TTCGCAAA‑GTTCAAATCCGCCCCCGGCGGGTTTGTCCTACTC‑GGGggaggggt > 1:424505/1‑147 (MQ=17) aGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCAcc < 1:381876/151‑1 (MQ=255) aGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGacaaac < 2:424494/151‑1 (MQ=255) gCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGacaaacaa < 1:761150/151‑1 (MQ=255) cATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTCCCCCCCCCCCTCCGGGCC‑GTTGC‑TTTTCAAC‑CTTTAAATCCGCTCCCGCCGGGTTTTTTCTTCCC‑GGGAGAGGGTTCACCGccaaacaa > 1:648783/1‑149 (MQ=17) cATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCCCCCGGCC‑GTTGC‑TTCGCAAC‑GTTCAAAACCGCTCCCCGCGGGGTTTTCCTACTC‑CGGAGAGTGTTTACCCacaaaaaa > 1:857141/1‑149 (MQ=17) ttCGGATGGCCTTTGGCTGGATTTGATGTCTGGAAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGAt < 2:339428/148‑1 (MQ=255) ttCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATa < 1:211497/149‑1 (MQ=255) gATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCACCCTCCGGGCC‑GGTGC‑TTTGCAAC‑GTTCAAATCCGCCCCCCGCGGGGTTGTTCTACTC‑CGGAGAGGGTTTACCCACAAAAAACAGATaaaaaa > 1:183475/1‑148 (MQ=255) ggCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACaaaa < 1:679219/150‑1 (MQ=255) ggCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTCCCCCCCCCCCCCCGGGCC‑GTTGC‑TTCGCAAA‑ATTTCAATCCCCCCCCGGCGGGGTTGTTCTCCTC‑GGGGGAGGGTTCACCCCCCAACAAAAAATAaaaaaaaa > 2:908407/1‑150 (MQ=255) ccTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGTCCCCCCCCCACCCTCCCGGCC‑GTTTC‑TTTGCAAA‑CTTTAAATTCCCCCCCCGCCGCTTTGTCCTACTC‑GGGGGGGAGTTTTCCCACCAACAACAAAAAAAACaaaa > 2:155918/1‑148 (MQ=9) ttCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTTCTGCCCCCCCCCCTCCCGGCC‑GGTTC‑TTCTCCAC‑GTTCAAATACGCTCCCCGCGGGGTTGTCCTCCTC‑CGGGGGGGGTTTACCGACAAAAAACAGATAAAACAAAAAGccc > 1:924072/1‑150 (MQ=255) ttCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTTCCCCCCACCCCCCGGGCC‑GTTGC‑TTCGCAAA‑ATTCAAAACCGCCCCCCGCGGGTTTGTTCTAATC‑CGGGGAGGGTTCACCCACAAACAACAGATAAAACaaaaaaaccc > 1:439323/1‑145 (MQ=14) ttCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACaaaa < 1:782374/145‑1 (MQ=255) gCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGGCCTGCCCGCCCCCCTCCGGGCC‑GGTGC‑TTTGCCACGGTTCAAA‑CCGCCCCCCGCGGGTTTGTGCTTCTC‑GGGGGGGTGGTTACCGCCCAACAACACATAAAACaaaaaaccc > 2:427392/1‑142 (MQ=255) tgatttgatGTCTGGCAGTTTATGGCGGGGGGCCTGCCCCCCCCCCTCCCGGCCGGTTCG‑TTGCCAAC‑TTCCAAACCCCCCCCCGCCGG‑TTTTTCCTTCCC‑GGGGGAGGGTTTTCCCACAAACAAAAGATAAAAAAAAAAGCCCacgctt > 2:914622/1‑145 (MQ=255) gatttgatGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTcc < 1:322987/151‑1 (MQ=39) gatttgatGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTcc < 2:84297/151‑1 (MQ=39) gatttgatGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCTCCGGGCC‑GGTGG‑TTCGCAAA‑CTTCAAAAACGCTCCCCGCGGGTGTTTCCTACCCGGGGGGGGGGTTCCCCG‑CAAACAACCaaaaaaaaaaaaaaaccacccct > 2:539074/1‑138 (MQ=255) gatGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTg < 1:331312/151‑1 (MQ=38) atGCCTGGCAGTTTATGGCGGGCGTCCCGCCCCCCCCCCCCCCGGCC‑CGTGC‑GTTGCAAA‑GCTCAAATCCCCCCCCGGCGGGTTTGTCCTTCTC‑AGGAGGGCGGTCACCCCCAAACAACCGAAAAAAAAAAAAGGCCAggcctt > 2:367117/1‑139 (MQ=0) gTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTGAGc < 1:8036/151‑1 (MQ=37) cTGGCAGTTTATGGCGGGCGTCCTGTCCCCCCCCCCCCCGGCC‑GGTTC‑TTTGCCAA‑GGTCAAAACCCCTCCCCGCGGGTTTGTCCTACTC‑GGGAGAGTGTTTACCCACCAACAACAAATAAAAAAAAAAGCCCCGGCTTCCCGCTGAGcc > 1:274417/1‑150 (MQ=2) gCAGTTTATGGCGGGCGTCCTGCCCGCCCCCCCCCGCGCC‑CTTTC‑TTTCCAAA‑GTGCAAATCCTCTCCCGGCCGGTTTGTTCTAAAC‑CGGGGGGTGTTTCCCCACCAAAAAAACATAAAACAAAAACCCCCATCTTACGGCTGGGCCcttt > 2:452808/1‑151 (MQ=2) ttATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTGAGCCTTTTGttt < 2:146772/150‑1 (MQ=38) ggcgggcgTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTGAGCCTTTTGTTTTAtt < 1:988362/150‑1 (MQ=38) cgggcgTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTGAGCCTTTTGTTTTATTTg > 2:642476/1‑150 (MQ=38) gTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTGAGCCTTTTGTTTTATTTGATGTCt > 1:659200/1‑151 (MQ=255) ccTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTGAGCCTTTTGTTTTATTTGATGTCTg < 2:647182/150‑1 (MQ=255) gCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTGAGCCTTTTGTTTTATTTGATGTCTGGc < 1:83452/149‑1 (MQ=255) gCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTGAGCCTTTTGTTTTATTTGATGTCTGGCAg < 2:680441/151‑1 (MQ=255) cccGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTGAGCCTTTTGTTTTATTTGATGTCTGGCAg < 2:537563/150‑1 (MQ=255) cccGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGGCTGAGCCTTTTGTTTTATTTGATGTCTGGCAGt > 1:328195/1‑151 (MQ=255) | TTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCC‑GTTGC‑TTCGCAAC‑GTTCAAATCCGCTCCCGGCGGATTTGTCCTACTC‑GGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGT > NC_000913/3423138‑3423434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |