| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,423,297 | 0 | G | C | 44.1% | 108.4 / 31.6 | 68 | intergenic (+103/+126) | yhdZ/rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| Reads supporting (aligned to +/- strand): ref base G (9/29); new base C (30/0); total (39/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.21e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCT > NC_000913/3423155‑3423444 | agagCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCCCC‑CCCCTCCCGGcc > 2:663232/1‑147 (MQ=255) cGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTc < 1:116897/151‑1 (MQ=255) gAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGTCGTCCTCGCCGCC‑ACCCTCCCGCCCGGTGA‑TTccc > 1:791964/1‑146 (MQ=255) gAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCC‑CCCCCCCCGGCCGGTGC‑TTCT‑Caa > 2:97787/1‑150 (MQ=255) ggCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCGCC‑CCCCCCCCGGCCGTTGC‑TTCG‑cca > 1:854244/1‑145 (MQ=255) ggCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGAGGCCTGCCCGCC‑CCCACCCCGGCCGCTGC‑tttttaa > 1:11671/1‑142 (MQ=255) gCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTc < 2:653167/151‑1 (MQ=255) aTTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCaa < 2:183062/151‑1 (MQ=255) ttttATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCCCC‑CCCCTCCCGGCCGGTTC‑TTTG‑CAA‑CGTTCaaa > 1:384300/1‑150 (MQ=25) aGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGTCAACCTCCCCCCC‑ACCCCCCCGGCCGATGC‑GTTC‑CAA‑CGCTTCATTTCGCTcccc > 2:1108529/1‑150 (MQ=255) gTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCcggc < 1:53023/151‑1 (MQ=255) aaTCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCcggcgg < 1:526732/151‑1 (MQ=255) aaTCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCGCC‑ACCCCCCCGGCCGTTGC‑TTCG‑CCA‑AGTTCAAATCCCCCCCccgcgg > 1:685721/1‑151 (MQ=21) aaTCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCC‑CCCCCCCCGGCCGTTTC‑TTCG‑CAA‑CCTTCCAAACCCCCCCccgcgg > 1:673979/1‑151 (MQ=255) aTTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCCCC‑CCCCCCCCGGCCGGTGC‑TTCG‑CCA‑CGGTTAAATCCCCTCCCCGCGGGttt > 1:4586/1‑150 (MQ=18) aTTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCCTTCTCCCCACCGACCGCCCGGGCGGTGCC‑TTAC‑CAA‑CGTTC‑AATACCCTCCCCGCCGAtt > 1:540839/1‑149 (MQ=255) gAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTAc < 2:1021940/150‑1 (MQ=255) gAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTAc < 1:617827/150‑1 (MQ=255) gAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTAc < 1:675318/150‑1 (MQ=255) gAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCCCCCGGCCGCTGC‑TTTG‑CAA‑CGTTCAAATCCGCCCCCCGCGGGTTTTTcc > 1:865124/1‑147 (MQ=18) aTGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCg < 2:498449/151‑1 (MQ=255) aTGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCg < 2:1016485/151‑1 (MQ=255) tGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGACGTCCTCCCCGCC‑ACCCTCCCGGCCGTTTT‑TTCG‑CCA‑CGTTCAAAAACTCTACCCGCGGCGTTGTCCTACt > 1:166028/1‑148 (MQ=255) atttgtagAAACGCAAAAAGGCCATCCGTCAGGATGGCCTTCTGCTTAATTTGATGCCTGGCAGTTTATGGCGGGCGTCCCGCCCCCC‑CCCCCCCCCGCCCGTGC‑TTTG‑CAA‑AGTTCAAAATCCCCCCCCGCGGGGTTGTTCTTCTCcgg > 2:820282/8‑150 (MQ=2) tAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCGCCCCCC‑ACCCCCCCGGCCGTTGC‑TTTG‑CAA‑CCTTCAAAACCCCCCCccgcggggtttttct > 1:811841/1‑133 (MQ=255) gTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTCCCCCCC‑CCCCCCCCGGCCGTTCT‑TTCC‑CAA‑CCTTCACATTCTCTCCCGGCGGCATTGTCCTCCCCgggcgg > 2:472164/1‑147 (MQ=17) tCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAgt < 2:729421/150‑1 (MQ=255) cGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAgtg < 2:471260/150‑1 (MQ=255) cGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCC‑ACCCCCCCGGCCGTTGC‑TTTG‑CAA‑AGTTCAAATCCCCTCCCCGCGGGTTTTTCCTCTTCGGGGGAgtg > 2:1078295/1‑150 (MQ=17) aaaaGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCC‑ACCCCCCCGGCCGGTGC‑TTCG‑CCA‑CGTTCAAAACCCCCCCCCGCGGGTTTTTTCTACTCCGGGGAgtggt > 1:430445/1‑148 (MQ=17) aaaGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGAGTTCTGACCGCC‑AACCACCCCGCCGTTTT‑TCCT‑CAA‑CATTCCAATCCGCTCCCGGGGGCtttcttctcatcagct > 1:54654/1‑129 (MQ=255) aaGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCCCCCGCC‑CCCCCCCCGGCCGGTGC‑TTTG‑CAA‑CAGTCAAAACCACCCCCCGCGGGGTTGTCATACTCTGGAGGgtg > 2:787655/1‑146 (MQ=255) aaaaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCGCCCCCC‑CCCCCCCCGGCCGCTTG‑TTTG‑CCA‑AGGTCAAAAACGCCCCCCGCGGGTTTGTTCTACTCGGGGGGGTGTTCTCCCac > 2:602958/1‑151 (MQ=12) aaaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGGGCTGCCCCCC‑ACCCCCCCGGCCGGTGC‑TTTG‑CAA‑CCTTCAAAACCGCTCCCCGCGGGTTTGTTCTACTCCGGggaggggttcccgac > 2:842059/1‑139 (MQ=255) aaaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCC‑CCCCTCCCGGGCGTTGC‑TTTG‑CCA‑CGTTCCAATCCCCTCCCCGCGGGGTTGTCCTCCTCCGGAGAGTGTTTACCGac > 1:90901/1‑150 (MQ=17) aaaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCC‑CCCCCCCCGGCCGTTGC‑TTCG‑CCA‑CGTTCAAAACCGCCCCCGGCGGGTTTGTTCTTCTCCGGAGAGTGGTTAcc > 1:1009488/1‑147 (MQ=17) aaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGacaa < 1:1028694/151‑1 (MQ=255) aaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGacaa < 2:997344/151‑1 (MQ=255) aaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCTCCCCCC‑ACCCCCCCGGCCGGTGCTTTTC‑CAA‑CG‑TCAAAACCCCCCCCCGCGGGTTTTTCCTCCTCCGGggaggggttccc > 2:556872/1‑138 (MQ=255) aaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGacaaa < 1:952064/151‑1 (MQ=255) aaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGacaaa < 1:753343/151‑1 (MQ=255) aGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCGCC‑ACCCCCCCGGCCCTTTC‑TTCGCCAA‑CG‑TCAAATTCCCCCCCGCCGGGGTTTTCCTCCTCTCGGGGGGGGTTACCGacaaa > 2:997956/1‑150 (MQ=255) ggCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGacaaaca < 2:18678/151‑1 (MQ=255) tCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCTCCCCCC‑CCCCCCCCGGCCGTTGC‑TTCG‑CAA‑AGTTCAAATCCCCCCCCCGCGGATTTGTCCTACTCGGGAGAGTGTTTACCCacaaacaa > 1:518253/1‑147 (MQ=17) tttCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCC‑CCCCCCCCGGCCGTTGC‑TTTC‑CAACCGTCCAAATCC‑CCCCCCGCGGGGTTTTTCTACTCCGGGGGGGGGTTTCCCACAAACAACAAATa > 2:631979/1‑150 (MQ=255) cGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTCCCCGCC‑CCCCCCCGGGCCGGTGG‑TTCG‑CAA‑ACTTTAAAACCGCCCCCGGCGGGCTTGTTCTTCTTCCGGGGGTGTTTGCCCCCAAACAAAAGaaaaaa > 2:524414/1‑150 (MQ=9) cGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCGCCCGCC‑ACCCCCCCGGCCGGTGC‑TTTG‑CAA‑CGCTCAAATTCCCCCCCCGCGGGGTTTTCCTACTCCGGGGAGGGGTCACCCCCAAACAACAAATaaaa > 1:882921/1‑150 (MQ=255) ggCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAg < 2:143274/151‑1 (MQ=255) ggCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCCGCCCCCC‑CCCCCCCCGGCCCGTGC‑TTCG‑CAA‑ACTTCAAATCCCCACCCCCCGGGATTGTCCTCCTCGGGGGAGGGTGTACCCCCAAACAACAACaaaaaaaaaa > 2:884071/1‑150 (MQ=255) tttCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGGCCTGCCCCCC‑CCCCCCCGGGCCGCTGC‑TTCG‑CAA‑CCTTCAAATCCGCTCCCCGCGGGTTTTTCCTACTCGGGGGAGGGTTTTCCGACCAACAACAGATAaaaaaaaaaaccc > 2:767331/1‑146 (MQ=255) cGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAg < 1:833455/150‑1 (MQ=255) atttgatGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCg < 1:1079175/151‑1 (MQ=38) ttgatGTCTGGCAGTTTATGGCGGGCGTCCTTCCCGCC‑CCCCTCCGGGCCCTTTC‑TTCG‑CAA‑CGTTCAAATCCTCCCCCGGCGGATTTTTCCTTCTCCGGGGAGGGTTTCCCCTCAAAAAACAAATAAAACAAAAAACCCa > 2:468826/1‑141 (MQ=2) tGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCC‑CCCCCCCCGGCCGTTTC‑TTTG‑CAA‑CGTTCAAATCCCCTCCCCGCGGGTTTTTTCTTCTCGGGGGAGGGTTTACCCACAAAAAACAAATAAAAAAAAAAGGCCCGTCTTCCgc > 1:235954/1‑145 (MQ=2) gTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGc < 2:960032/151‑1 (MQ=37) ggCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCtt < 2:210035/150‑1 (MQ=35) cAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTg < 2:49652/151‑1 (MQ=37) ggcgggcgTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTAttt < 2:1045986/151‑1 (MQ=38) gggcgTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGAt < 2:793518/151‑1 (MQ=38) gTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCt > 1:220397/1‑151 (MQ=40) ccTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTg < 1:755428/150‑1 (MQ=40) tGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGc > 1:224085/1‑150 (MQ=40) gCCCGCC‑GCCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGc < 2:700438/149‑1 (MQ=255) gCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGc > 2:312671/1‑149 (MQ=40) gCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTcc > 2:219901/1‑151 (MQ=40) cccTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTAc < 2:1069665/151‑1 (MQ=40) tCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTActct > 2:292738/1‑151 (MQ=40) ccGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTActct < 1:897599/150‑1 (MQ=40) | AGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCC‑ACCCTCCGGGCCGTTGC‑TTCG‑CAA‑CGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCT > NC_000913/3423155‑3423444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |