| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 589,934 | 0 | T | G | 47.1% | 98.7 / 28.4 | 71 | T341P (ACC→CCC) | nfrA | bacteriophage N4 receptor, outer membrane subunit |
| Reads supporting (aligned to +/- strand): ref base T (1/36); new base G (33/0); total (35/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.39e-19 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CATCAGTTGCCAGGTTAGTTGATCCAGGCGGGTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGTATAATTC‑GCCAACGCCTGAACGGGGTTAGCGCTGTATTT > NC_000913/589785‑590072 | cATCAGTTGCCAGGTTAGTTGATCCAGGCGGGTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTg < 2:1328695/151‑1 (MQ=255) aTCAGTTGCCAGGTTAGTTGATCCAGGCGGGTAAGAATTTCCGGGTCTTGCTGATACCGCAATCGTGCCACACGCCGAGCTTCAGCCTTGTTACGGGTCGCCCCGCTGACAGCCTAACGCTCCTCAAGCATTTCATTGGCGgggggggggg > 1:1043051/1‑151 (MQ=255) tGCCAGGTTAGTTGATCCAGGCGGGTAAGATTTTCCGGGTCTTGCTGATAAAGCAATCGTGCCCGACGCAGAGCTTCAGCCTTTTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGggggggggggggg > 1:2855/1‑145 (MQ=255) ccAGGTTAGTTGATCCAGGCGGGTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑t < 1:1515702/151‑1 (MQ=255) ccAGGTTAGTTGATCCAGGCGGGTAAGAATTGCCGGTTCTTGCCGATACAGCAATCGTGCCAGACGGAGAGCTTCAGCCTTGGTACGGGGTGCCACGCCGACAGCATAAAGCTCCTCAAGAATTTTCATGGCGgggggggggggggggag > 1:962791/1‑143 (MQ=255) cAGGTTAGTTGATCCAGGCGGGTAAGATTTTCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGgggggggggggggggggg > 2:604004/1‑142 (MQ=255) cAGGTTAGTTGATCCAGGCGGGTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑tt < 1:609980/151‑1 (MQ=255) ttAGTTGATCCAGGCGGGTTAAATTTGCCGGGTCTTGCTGATACAGCAATCGTGCCCGACGCAGAGCTTCAGCCTTGTTACGGGGCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGgggggggggggggggggggtttt > 1:462931/1‑138 (MQ=255) gATCCAGGCGGGTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGc < 2:335829/151‑1 (MQ=255) tCCAGGCGGGTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGggggggggggggggggggtttttt > 1:405533/1‑130 (MQ=255) cAGGCGGGTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGGAG‑gtttttt > 2:1128119/1‑140 (MQ=255) ggCGGGTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGcgtcgt < 1:396542/150‑1 (MQ=255) ggCGGGTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTa < 1:745776/151‑1 (MQ=255) ggTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGa < 2:1435199/151‑1 (MQ=255) gTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGGAG‑GTTTTTCGCTGCGTCGTA‑Ct > 2:834710/1‑148 (MQ=255) gTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGGAG‑GTTTTTCGCCGCGTCGTA‑CTg > 1:1232998/1‑149 (MQ=255) tAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGGGGCGGGCCG‑GTTTTTCGGTGCGTCGTa > 2:1002763/1‑145 (MQ=255) aGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGCGGGGAGATTTTTGC‑CTGCGTCGTA‑cctaacct > 2:1102555/1‑144 (MQ=255) aGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACctt < 1:814981/151‑1 (MQ=255) gATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGAGCAG‑TTTTTTCGCTGCGTCGTA‑CTGACctt > 2:553489/1‑150 (MQ=255) aTTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGGAG‑GTTTTTCGCCGCGGCGGA‑CTTAActt > 1:1268970/1‑149 (MQ=255) aTTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGCAG‑TTTTTTTGGTGCGGCGTA‑Cttgccct > 1:1018030/1‑143 (MQ=255) aTTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACcttc < 1:569076/150‑1 (MQ=255) gCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTa < 1:1348494/151‑1 (MQ=255) gCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGGGGCGAGCCG‑GTTTTTCGCTGCGTCGGA‑CTGACCTTCttttt > 2:280229/1‑150 (MQ=255) ggTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGAGGAG‑GTTTTGCGCTGCGTCGGA‑CTGACCCTCttttta > 1:1235938/1‑147 (MQ=255) ggTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACa < 1:117467/151‑1 (MQ=255) ttCTTGCTGATTCAGCAATCGTGCCAGACGCAGACCTTCAGCCTTGTTACGGGTCGACACGCTGACAACATCACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGCGCAG‑TTTTTGCGCTGCGTCGTA‑CTGCCCTTCTTTTAACa < 1:506480/149‑1 (MQ=255) tCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGAGGAG‑GTTTTTCGCTGCGGCGTA‑CTGACCTTCtttttaaaac > 2:1482743/1‑144 (MQ=255) cTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGGAG‑TTTTTTCGCTTCGTCGGT‑CTGACCTTTTTTTTACAacac > 1:367561/1‑151 (MQ=255) cTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGGAG‑GTTTTTTGCTGCGGCGTA‑CTGGCCTTCtttttaaaaca > 2:450236/1‑143 (MQ=255) ttGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGGGGGGAGCAG‑GTTTTGCGCTGCGCCGGA‑CTTACCTTTTTTTAACAGCAcc > 2:661272/1‑151 (MQ=255) tGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCAc < 1:621479/149‑1 (MQ=255) gCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGAGGAG‑ATTTTTCGCTGCGTCGTG‑CTGACCTTCTTTTTAAAGCAACg > 2:1134875/1‑150 (MQ=255) gCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCgg < 2:137135/151‑1 (MQ=255) tGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGAGCAG‑TTTTTGCGCTGCGGCGTA‑CTGAACTTCTTTTTACAGCACCgg > 1:626707/1‑149 (MQ=255) gATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTa < 1:415122/150‑1 (MQ=255) gATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTa < 2:1029272/150‑1 (MQ=255) gATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAg < 1:1316813/151‑1 (MQ=255) gATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAg < 2:1105368/151‑1 (MQ=255) aCAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGt < 2:784223/151‑1 (MQ=255) cAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGCGGGCAG‑GTTTTTCGCCGCGTCGGG‑CTGACCTTTTTTTTACAGCACCgggtgcg > 1:9214/1‑144 (MQ=255) aGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGAGCCG‑TTTTTTTGCCGCGTCGTA‑CTGTCCTTCTTTTTAAAGCACCGGGAGCg > 2:1545751/1‑148 (MQ=255) gCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTcgc < 2:1029470/151‑1 (MQ=255) gCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTcgc < 2:26938/151‑1 (MQ=255) cAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGGGGGGGGCAG‑TTTTTTCGCTGGGTCGGA‑ATGGACTTCTTTTTAAAACACCCGTAGGGTcgc > 2:797734/1‑150 (MQ=255) aTCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGCGAGCAG‑GTTTTTCGCTGCGTCGTA‑CTGACCTTCTTTTTACAACACCCGTAGCGTCGCGcc > 2:1545987/1‑151 (MQ=255) gTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGAAG‑GTTTTTCGCTGCCGCGGT‑CTGGCCCTCTTTTTACAACACCGGGAGCGGCGCGccc > 1:536987/1‑148 (MQ=255) gTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGCGGGCAG‑GTTTTTCGCTGCGTCGTA‑CTGCCCCTTTTTTTAAAGCACCGGGAGCGTCGCGcc > 2:1158069/1‑148 (MQ=255) cGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACt < 1:222230/151‑1 (MQ=255) gCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGGAG‑TTTTTTCGCTGCGGCGTG‑CTGACCCTCTTTTTACAGCACCCGGAGCGGCGCGCccacaa > 1:962878/1‑144 (MQ=255) cAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTgg < 2:1005078/151‑1 (MQ=255) gagCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGCGGGCAG‑TTTTTTCGCTGCGTCGTA‑CTGACCTTCTTTTTACAGCACCGGGAGCGGCGCGCCCACAACATACTGGC‑g > 2:508275/1‑151 (MQ=255) gagCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑g < 2:487548/151‑1 (MQ=255) gCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGCGGGGAG‑GTTTTTTGCTGGGGCGCA‑GTTACCCTCTTTTTACAACACCGGGAGCGTGGCGCCCACAACAAACTGGC‑gg > 2:1506606/1‑150 (MQ=255) cTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGCAG‑GGTTTTTGCTGCGTCGTA‑CTGTCCTTCTTTTTTAAGCAACCGTGGCGTCGCGCCAACAAAACACTTGC‑ggg > 1:1059727/1‑149 (MQ=255) cTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGAGCAG‑GTTTTTTGCCGCGTCGTG‑CCGTCCCTCTTTTTTAAACACCGGGAGGGTCGCGCCCAAAAAAAACTGGC‑ggg > 1:1387663/1‑149 (MQ=255) ttCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGGGGCGAGAAG‑TTTTTTCGCTGCGGCGTA‑CTGACCTTCTTTTAACAACACCGGTAGCGGCGCGCCAAAAACATACTGGC‑gg > 2:224647/1‑148 (MQ=255) gCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGCAG‑GTTTTTTGCTGCGGCGTA‑CTGACCTTTTTTTTACAGCACCCGGAGCGGCGCGCCCAAAACAAACTGGC‑ggg > 1:799154/1‑144 (MQ=255) gCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGCGGGCAG‑GTTTTGCGCCGCGTCGGA‑CTGACCTTCTTTTTACAACACCGGTAGCGTCGCGCCAACAACATACTGGC‑ggg > 1:726678/1‑144 (MQ=255) gCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGCGGTGAGGAG‑GTTTTGAGCCGCGGCGGT‑CCGACCTTCTTTTATCAGACACGGTGGCGGTCCGCcaacacactaatgggg > 1:13929/1‑132 (MQ=255) ccTTTTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGAGGCG‑TTTTTTCGCTGCCTCCTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCCCCAACATACTGGC‑gg > 2:489567/1‑143 (MQ=255) cTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTGTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGc < 1:1102495/150‑1 (MQ=255) gggTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGCGGGCAG‑GTTTTTTGCTGCGTCGTA‑CTGACCTTCTTTTTAAAGCACCGGTAGCGTCGCGCCAACAACATAATGGG‑GGGTggtgggggaa > 2:1044864/1‑137 (MQ=255) cGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGta < 2:289377/151‑1 (MQ=255) gCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGtat < 2:841413/151‑1 (MQ=255) tGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGGGGGGGGGGGGCAG‑CTTTTTCGCTTGGTCGTATCTACCCTTTTTTTAAAACAACCGG‑GGCGGCGCGCCAACCACATACTGGCGGGGTG‑TTGGCaaaaattacgccgt > 1:1434188/1‑134 (MQ=255) gACAGCATAGCGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGTATAATTC‑Gc < 1:816270/150‑1 (MQ=255) gCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGTATAATTC‑GCCAACg < 2:1196488/151‑1 (MQ=255) cATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGTATAATTC‑GCCAACGc < 2:1413335/151‑1 (MQ=255) aCGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGTATAATTC‑GCCAACGCCTGa < 1:406749/151‑1 (MQ=255) cctcAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGTATAATTC‑GCCAACGCCTGAACgg < 1:1506516/150‑1 (MQ=255) aGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGTATAATTC‑GCCAACGCCTGAACGGGGTTAg < 2:818853/151‑1 (MQ=255) tCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGTATAATTC‑GCCAACGCCTGAACGGGGTTAGCGCTg < 1:563973/150‑1 (MQ=255) cATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGTATAATTC‑GCCAACGCCTGAACGGGGTTAGCGCTGt < 1:91236/150‑1 (MQ=255) cATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGTATAATTC‑GCCAACGCCTGAACGGGGTTAGCGCTGt < 2:1228607/150‑1 (MQ=255) gCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTGTTCGGCAAA‑TCTACCGTATAATTCACCCAACACCGGAAGgggggtgcggcggctttt > 1:219174/1‑136 (MQ=255) | CATCAGTTGCCAGGTTAGTTGATCCAGGCGGGTAAGATTTGCCGGTTCTTGCTGATACAGCAATCGTGCCAGACGCAGAGCTTCAGCCTTGTTACGGGTCGCCACGCTGACAGCATAACGCTCCTCAAGCATTTCATTGGCGGGGAGGGTGGCGAGCAG‑TTTTTGCGCTGCGTCGTA‑CTGACCTTCTTTTAACAGCACCGGTAGCGTCGCGCCAACAACATACTGGC‑GGTTG‑TCGGCAAACTGTACCGTATAATTC‑GCCAACGCCTGAACGGGGTTAGCGCTGTATTT > NC_000913/589785‑590072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |