| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 366,526 | 0 | T | G | 44.4% | 119.5 / 55.0 | 99 | T329P (ACC→CCC) | lacI | lactose‑inducible lac operon transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base T (6/49); new base G (44/0); total (50/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.44e-22 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 106 total aligned reads displayed.
AGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATAACATGAGC > NC_000913/366379‑366675 | aGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTG‑TT‑GGGGG‑CCCgggggg > 1:559752/1‑150 (MQ=255)aGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGATGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGCTT‑GCGTT‑TT‑TGGCC‑CCCgggggg > 2:249189/1‑150 (MQ=255) ccTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGttt < 1:791195/151‑1 (MQ=255) tGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGTA‑TT‑TGGGG‑CCCGGGGGGgtttt > 2:142320/1‑151 (MQ=255) ggTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTACAGTCGGGAAACCTGTCGTGACAGCTGCATTAATGAATCCGCCAACGCGCGGGGAGAGGA‑GGGTT‑GTGTA‑GT‑TGGCG‑AACAGGTGGGttttctt > 1:345374/1‑151 (MQ=255) gCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TTGGA‑TT‑TGGGG‑CCCGGGGGGGttttctttt > 1:406240/1‑150 (MQ=255) gCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTttttctttt < 2:1255508/150‑1 (MQ=255) gCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTttttctttt < 1:392593/150‑1 (MQ=255) tAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GGGGA‑TT‑TGGGG‑CCCGGGGGGGTTTTTTTTTCAcc > 2:1106907/1‑151 (MQ=255) aaTGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GTGTA‑TT‑TGGGG‑CCCGGGGGGTTTTTTTTTTTAcc > 2:242156/1‑150 (MQ=255) aaTGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCa < 1:1523136/151‑1 (MQ=255) aTGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAg < 1:402014/151‑1 (MQ=255) tgagtgagCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGGTTT‑GGGTG‑TG‑GGGGC‑CCGGGGGGGtttttttttttccc > 2:856335/1‑145 (MQ=255) tAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TTGGGGGG‑CCGGGGGGGTTTTTTTTTTCTCC‑GGGAGACggg > 1:1530938/1‑150 (MQ=255) tAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGGT‑TT‑TGGCGCCCGGGGGGGTTTTTTTTTTTACCA‑TGAGACggg > 1:1003427/1‑150 (MQ=255) aaCTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACggg < 1:1355648/149‑1 (MQ=255) aaCTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGc < 1:581203/150‑1 (MQ=255) aCTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGGA‑TT‑TGGGG‑CCCGGGGGGGTTTTTTTTTTCCCAATGAGAcag > 2:1154072/1‑145 (MQ=255) cTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGTA‑TT‑TGGGG‑CCAGGGGGGGTTTTTTTTTTTCCAGGGAGACGGGCaa > 2:514727/1‑150 (MQ=255) cTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑TGGCG‑CCCGGGGGGGTTTTTTTTTTACCAGGGAGACggg > 2:1271709/1‑147 (MQ=255) cacaTTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAg < 1:53804/151‑1 (MQ=255) acaTTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGc < 1:954976/151‑1 (MQ=255) caTTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCt < 2:893175/151‑1 (MQ=255) aTTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTg < 1:741271/151‑1 (MQ=255) ttAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGGTT‑GGGGA‑TT‑TGGCG‑CCCGGGGGGGGTTTTTTTTTACCCGTGGGGCGGGCAAcc > 1:1377635/1‑145 (MQ=255) tAATTGCGTTGCTCTCACTGCCCGCGTGCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCATCGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGa < 1:213738/150‑1 (MQ=255) aaTTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGGATTT‑GGGGG‑CCGGGGGGGTTTTT‑TTTTTTCCCGGGAGACGGGCGACAGCTGAtt > 1:1126451/1‑151 (MQ=255) aTTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTg < 2:1441384/151‑1 (MQ=255) aTTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTg < 2:1430013/151‑1 (MQ=255) aTTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCAAGATGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGGA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCTCCAGTGAGACGGGCAAAAGCTGATTg < 1:117775/151‑1 (MQ=255) tgcgttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTT‑TT‑TGGCG‑CCAGGGGGGGTTTTTTTTTTACCAGTGAGACGGGCAAAAGCTGAtt > 2:478912/1‑148 (MQ=255) gcgttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTTGGCGTT‑TT‑GGG‑G‑CCCGGGGGGGTTTTTTTTTTACCCGTGAGACGGGCAACAGCCGACTTccc > 1:893452/1‑151 (MQ=255) cgttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TGGGA‑GT‑TGGGG‑CCCGGGGGGTTTTTTTTTTTACCACTGTGACCGGCcacaaacgattgtc > 2:735322/1‑139 (MQ=255) cgttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGGG‑CCCGGGGGGGTTTTTTTTTTACCAGTGAGACGGGGAAAAGCTGATTTccc > 1:418593/1‑150 (MQ=255) cgttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCt < 2:1455832/151‑1 (MQ=255) cgttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGCTT‑GCGGT‑TT‑TGGGG‑CCAGGGGGGGTTTTTTTTTTTCCAGCGAGAAGGGGGACAACTGAttttcc > 1:458461/1‑146 (MQ=255) gttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCtt < 2:1065438/151‑1 (MQ=255) ttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TTGTA‑TT‑TGGCG‑GCCGGGGGGGTTTTTTTTTTACCCGGGAGACGGGCCACAGCTGATTGcccct > 2:360095/1‑148 (MQ=255) ttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGTG‑TT‑TGGGG‑CCAGGGGGGGTTTTTTTTTTACCAGTGAGACGGGGAACAACTGATTGccc > 2:621347/1‑148 (MQ=255) ttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGTA‑TT‑TGGCG‑CCCGGGGGGGTTTTTTTTTCACCAGTGGGAAGGGCAACAACTGATTGcccct > 2:1079245/1‑148 (MQ=255) ttgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGCTT‑GCGTA‑TT‑GGGGG‑CCCGGGGGGGTTTTCTTTTCACCAGGGAGACGGGCAACAGCTGATTGcccct > 1:1464734/1‑148 (MQ=255) tgcgCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGTA‑TT‑TGGGG‑CCCGGGGGGTTTTTTTTTTTTCCAGTGAGACGGGGAACAACTGATTGccc > 2:1443468/1‑147 (MQ=255) cgcTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGTT‑TT‑GGGGG‑CCCGGGGGGGTTTTTTTTTTACCAGCGAGACGGGCAACAGCTTATTTCCCTTTAcc > 2:135978/1‑151 (MQ=255) cgcTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCAcc < 1:455395/151‑1 (MQ=255) gcTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGTA‑TT‑GGGGG‑CCCGGGGGGGTTTTTTTTTTTCCAAGGAGACGGGCCACAGCTGAATGCCCTTCAcc > 2:860555/1‑150 (MQ=255) cACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCt < 1:1407163/151‑1 (MQ=255) cccGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGGA‑TT‑TGGGG‑CCAGGGGGGGTTTTCTTTTTACCCGGGGGACGGGGAACAACTGAGTGCCCCTCACCCCCTCGccc > 1:6076/1‑151 (MQ=255) ccGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCt < 1:47562/151‑1 (MQ=255) cGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTC‑TT‑TGGCG‑GCAGGGGGGGTTTTTTTTTTACCCGCGAGACGGGCAAAAGCTGATTGCCCCTCACCGcc > 1:1029207/1‑143 (MQ=255) gCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GTGGA‑TT‑TGGGG‑CCCGGGGGGTTTTTTTTTTTTCCAGGGAGACGGGGAACAGCTGATTGCCCTTTACCCCCTGGccc > 2:59980/1‑148 (MQ=255) tttCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGGTTT‑TGTTG‑TT‑GGGGG‑CCGGGGGGGTTTTTTTTTTTCCCAAGGGGA‑GGGGAAAAGCTGGTTGCCCCTCTCCGCCCCGCCCCgag > 1:1283126/1‑150 (MQ=255) ccAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTgagaga < 1:1485446/150‑1 (MQ=255) aGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTTGCCCTGAGAGAGt < 1:676901/150‑1 (MQ=255) gTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTg < 1:1281354/151‑1 (MQ=255) gTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTg < 1:1579609/151‑1 (MQ=255) aaaCCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TTGTA‑TT‑TGGCG‑CCAGGGGGGGTTTTTTTTTTACCAGTGAGACGGGCAACAGCTGATTGCCCCTCACCCCCCGGCCCTGagagaggt > 2:898117/1‑142 (MQ=255) aaaCCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGTA‑TT‑TGGGG‑CCCGGGGGGGTTTTTTTTTTACCAGGGAGACGGGGAAAAGCTGGTTTCCCCTCACccccccggcccggggg > 2:1304434/1‑128 (MQ=255) ccTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCg < 1:253929/151‑1 (MQ=255) tGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGCTT‑GCGCA‑TT‑TGGGG‑CCCGGGGGGGTTTTTTTTTTACCCCGGTGGAGGGCAACAACCGGTTGCCCCTCTCCCCCCCGGCCTCGGAGAGGTGTTGCAAGccgg > 1:1177483/1‑148 (MQ=255) gTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGTA‑TT‑TGGGG‑CCCGGGGGGGTTTTTTTTTTACCAGTGAGAAGGGGAACAGCTGATTGCCCTTCACCCCCTGGCCCTGAGAGAGGTGCAGCAAACGGGcc > 2:1525302/1‑149 (MQ=255) gTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCAc < 1:1579776/151‑1 (MQ=255) gCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGc < 1:670313/151‑1 (MQ=255) gCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGc < 2:674028/151‑1 (MQ=255) ccAGCTGCATTAAGGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GAGTA‑TA‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTTCACGCt < 1:1152088/151‑1 (MQ=255) gCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTC‑TT‑TGGGG‑CCAGGGGGGGTTTTCTTTTTACCACAGAGAGGGGCAACACCGGATTGGCCCTCCCCCCCCCGCCCTTGGAGAGTTGCCGCAAGCGGGCCACCCttg > 1:464665/1‑148 (MQ=255) gCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTgg < 1:59082/150‑1 (MQ=255) tGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GTGTA‑TT‑TGGCG‑GCAGGGGGGGTTTTTTTTTTAACAGAGAGACGGGGAAACACTGGTTGACCTTCACCGCCCGGCCCCGAGAGAGTTGGGGCAAGCGGGGCACGCCGGgtt > 2:860737/1‑151 (MQ=255) gCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGttt < 2:6076/150‑1 (MQ=255) cATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑TGGCG‑CCCGGGGGGGTTTTCTTTTTACCAGTGAGACGGGCAACCGCTGATTGCCCTTCACCCCCCGGCCCCGCGAGAGTTGCAGCAAACGGTCCACGCTGGttt > 1:899523/1‑149 (MQ=255) aTGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGTAGCAAGCGGTCCACGCTGGTTTGCCCcag < 2:345403/151‑1 (MQ=255) aaTCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGTA‑TT‑TGGCG‑CCCGGGGGGGTTTTTTTTTTTCCAGGGAGACGGGCAACAACTGATTTCCCTTCACCCCCCGGCCCTGAGAGAGTTGCAGCAAGCGGGCCACGCTGGGTTTcccc > 2:135067/1‑146 (MQ=255) aaTCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑TCGCA‑TT‑TGGGG‑GCCGGGGGGTTTTTTTTTTTAACCGCGGGAGCGGCAAAACCTGGTTTCCCCTCACCGCCCCGCCCCCAGGGAGATGGACCACGAAGTCCCCGCCGGCTTGaccccccgg > 2:1374923/1‑146 (MQ=255) aaTCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTTATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCcagcag < 2:1135718/151‑1 (MQ=255) aaTCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCcagcag < 2:1204148/151‑1 (MQ=255) aTCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑TGGGG‑CCAGGGGGGGTTTTTTTTTTACCAGTGAGACGGGGAACAGCTGATTGCCCTTCACCCCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCCGCAgg > 2:1303603/1‑151 (MQ=255) aTCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAgg < 1:1357499/151‑1 (MQ=255) cGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGc < 1:1063203/150‑1 (MQ=255) cGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGc < 2:1099825/150‑1 (MQ=255) ccAACGCGCGGGGAGAGGC‑GGTTT‑TCGTA‑TT‑GGGGG‑GCCGGGGGGTTTTTTTTTTTACCCGGGAGACGGGGAACAGCCGATTGCCCTTCACCCCCTGGCCCTGAGAGAGATGCGGCAAGCGGTCCACCCTGGTTTGCCCCCGCAgg > 2:725288/1‑146 (MQ=255) ccAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑TGGCG‑CCAGGGGGGGTTTTCTTTTTACCAGGGAGACGGGCAACAGCTGATTGCCCTTCACCCCCCGGCCCCGAGAGAGTTTCAGCAAACGGTCCCCCCTGGTTTGCCCCCGCAGGGGaa > 2:225834/1‑150 (MQ=255) cgcgcgGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTCGCCCCAGCAGGCGAAAAtac < 2:652588/151‑3 (MQ=255) gggAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCGCCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTg < 1:9364/151‑1 (MQ=255) gagGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGAtgg < 1:1536049/151‑1 (MQ=255) agGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGAtgg > 1:1164495/1‑150 (MQ=255) ggC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGAtggtg > 2:1166267/1‑151 (MQ=255) gC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGAtggtgg > 2:854476/1‑151 (MQ=255) gC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGAtggtgg < 2:1531030/151‑1 (MQ=255) c‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATggtggt < 1:803441/151‑1 (MQ=255) ggTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGtt < 1:656189/151‑1 (MQ=255) a‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCggg > 2:813005/1‑151 (MQ=255) a‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGAAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAAcggcgg < 2:634956/150‑1 (MQ=255) ggCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGatat < 1:409864/151‑1 (MQ=255) gcg‑cCAGGGTGGTTTTTCTTTCCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGAtata < 1:414146/151‑1 (MQ=255) cg‑cCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATaa < 2:1536977/151‑1 (MQ=255) cAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATAACAt < 2:1242851/151‑1 (MQ=255) aGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATAACAt > 2:1157261/1‑150 (MQ=255) ggtggtTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATAACATGAg < 2:371304/151‑1 (MQ=255) gtggtTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGGTATAAAATGAg > 1:742897/1‑150 (MQ=255) gtggtTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATAACATGa > 2:517573/1‑149 (MQ=255) gtggtTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATAACATGAGc < 2:921349/151‑1 (MQ=255) | AGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGC‑GGTTT‑GCGTA‑TT‑GGGCG‑CCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATAACATGAGC > NC_000913/366379‑366675 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |