Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,413,735	0	A	T	45.6%	102.3 / 51.2	79	Y2* (TAT→TAA)	ydaC	DUF1187 family protein, Rac prophage; putative double‑strand break reduction protein
Reads supporting (aligned to +/- strand):  ref base A (4/39);  new base T (36/0);  total (40/39)
Fisher's exact test for biased strand distribution p-value = 2.53e-18
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGTTTTACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGG  >  NC_000913/1413589‑1413885                                                                                                                                                      |                                                                                                                                                            aGTTTTACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGTGG‑T‑AA‑TTTTATA‑Ca                                                                                                                                                        <  2:1010138/151‑1 (MQ=255)     ttACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTa‑tatta                                                                                                                                                     >  2:201120/1‑148 (MQ=255)       aCTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAac                                                                                                                                                   <  2:788984/150‑1 (MQ=255)         tttCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑ATTTTTA‑TATTAaca                                                                                                                                                  >  1:781814/1‑149 (MQ=255)          ttCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAacac                                                                                                                                                 <  2:870517/149‑1 (MQ=255)          ttCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAacac                                                                                                                                                 <  2:739716/149‑1 (MQ=255)          ttCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACAcc                                                                                                                                                <  2:1255193/150‑1 (MQ=255)            cTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTT‑AA‑TTTTTTA‑‑ATGaaa                                                                                                                                                   >  1:962464/1‑144 (MQ=255)             tGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTA‑AATGAAAACcccc                                                                                                                                             >  2:758263/1‑150 (MQ=255)              gCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑CA‑ATTTTTT‑CATGAaaac                                                                                                                                                 >  2:876186/1‑145 (MQ=255)                tctctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTT‑AATTAACACCCCCctt                                                                                                                                          >  2:248528/1‑150 (MQ=255)                 ctctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACGCCTCCatt                                                                                                                                          <  1:1477826/149‑1 (MQ=255)                  tctGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑CA‑TTTTTTA‑TATTaaaaacccccctatt                                                                                                                                       >  2:1372603/1‑138 (MQ=255)                     ggAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCattattatt                                                                                                                                    <  2:373482/151‑1 (MQ=255)                     ggAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCattattatt                                                                                                                                    <  2:1448890/151‑1 (MQ=255)                     ggAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCattatt                                                                                                                                       <  1:538254/148‑1 (MQ=255)                      gAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTA‑TATTAAAACCCCCCTtttttttt                                                                                                                                   >  1:94546/1‑151 (MQ=255)                       aaaCGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑TGAA‑TTTTTTA‑AATAAAAACCCCCtttttttttt                                                                                                                                   >  1:126818/1‑151 (MQ=255)                           gCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTA‑AATATAAAACCCCACTATTATTTTCac                                                                                                                               >  2:2912/1‑149 (MQ=255)                            ccTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGGTT‑AA‑TTTTTTA‑‑ATGAACAACTCCCTttttttttt                                                                                                                                  >  2:783051/1‑145 (MQ=255)                                cttcttTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGtt                                                                                                                          <  2:288629/150‑1 (MQ=255)                                 ttcttTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTA‑TATTAAAACCTCCCTTATTTTTTTTTGTGGtt                                                                                                                          >  2:480420/1‑149 (MQ=255)                                     tttttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGt                                                                                                                       <  2:864518/148‑1 (MQ=255)                                     tttttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑G‑AA‑TTTTTTA‑AATATAAACCCCCATTTTTTTTTTCAATgggttggtt                                                                                                                     >  2:1164520/1‑143 (MQ=255)                                      ttttACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTCAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑TA‑TTTTTTA‑CATGAAAAACCCCCTTATTATTTTTTGTGGTTCGttttt                                                                                                                   >  1:153143/1‑149 (MQ=255)                                           ccTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTT‑CATTAACACCCCCCTTATTATTTTCACTGGTTTGtttt‑ttt                                                                                                                >  2:1134123/1‑147 (MQ=255)                                              gagaGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTA‑AAAGAACACCTCCCCTTTTTTTTTCCGTGGttttttttttttctc                                                                                                             >  2:37629/1‑136 (MQ=255)                                               agagCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCttt                                                                                                         <  1:835333/151‑1 (MQ=255)                                               agagCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCttt                                                                                                         <  1:1379626/151‑1 (MQ=255)                                                 agCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑A‑AA‑TTTTTTT‑TATTGAGACCCCCCTTATTATTTCCTGCGGATTGtttt‑ttttttcttt                                                                                                         >  1:625674/1‑141 (MQ=255)                                                  gCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGa                                                                                                      <  2:450295/151‑1 (MQ=255)                                                  gCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGa                                                                                                      <  1:1097789/151‑1 (MQ=255)                                                   cATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑TA‑TTTTTTATAATAAAAACCCCCTTTTTTTTTTCC‑TTGGGTTGTTTT‑TTTCATCtttt                                                                                                        >  1:1529662/1‑147 (MQ=255)                                                     ttttttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTT‑CAATAAAAACCCCCTTATTTTTTTCAGCGGGTCTTTTT‑TTTCTTCtttttt                                                                                                      >  1:687993/1‑145 (MQ=255)                                                         ttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTT‑TATAAAAACCTCCCTTATTATTTTCACTGGGTTGTTTT‑TTTCCTTTTTTTAGTGctt                                                                                                >  2:1228472/1‑150 (MQ=255)                                                         ttCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTA‑CATTAACACCCCCCTTTTTTTTTTCAGTGGTTTGTTTT‑TTTCATTTTTTTTGTGctt                                                                                                >  2:91238/1‑150 (MQ=255)                                                             cATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCtttt                                                                                           <  2:120028/151‑1 (MQ=255)                                                              aTTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCttttt                                                                                          <  2:1301358/151‑1 (MQ=255)                                                                   gATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCa                                                                                        <  2:662478/148‑1 (MQ=255)                                                                   gATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑t                                                                                     <  1:15486/150‑1 (MQ=255)                                                                     tttCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑CA‑TTTTTTT‑TATAAAAAACACCCTTTTTTTTTTCACTGGGTTGTTTT‑TTTCATCTTTTTCGTTCtttttttt                                                                                          >  1:1221614/1‑144 (MQ=255)                                                                       tCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑TA‑TTTTTTA‑TATTAAAAACCCCCCTTTTTTTTTCAGTGGGTTGTTTT‑TTTTTTCTTTTTAGTGGTTCttttt                                                                                          >  1:325804/1‑142 (MQ=255)                                                                       tCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑cca                                                                                <  2:1100960/150‑1 (MQ=255)                                                                        cGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑cca‑c                                                                              <  2:1122478/150‑1 (MQ=255)                                                                         gTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑CA‑ATTTTTA‑TAATAACACCCCCACTTTTATTTTCAGGGGGTTGTTTT‑TTTCCTCCTTTGGGTGGTTTCTTTTTAC‑TT‑tca‑c                                                                              >  1:1318917/1‑149 (MQ=255)                                                                          ttAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTA‑AAATAAAAACCCCCTTTTTTTTTTCAGTGGGTTGTTTT‑TTTCATCTTTTTAGTGGttttttttttctt                                                                                     >  2:115223/1‑139 (MQ=255)                                                                           tAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTA‑TAATAAAACCCCCCATATTTTTTTCATTGGTTTGGTTT‑TTTTCTCTTTTGAGTGGTTCTTTTTTTC‑TT‑ccc‑cc                                                                             >  2:660738/1‑148 (MQ=255)                                                                           tAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTA‑CAAGAACACCCCCCTTATTATTTTCAGTGGTTCGTTTT‑TTTCCTCTTTTCAGTGCTTTTTTTTTTC‑TT‑ccc‑cc                                                                             >  2:1299109/1‑148 (MQ=255)                                                                           tAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCAt                                                                           <  1:667374/150‑1 (MQ=255)                                                                            aGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATa                                                                          <  2:475124/150‑1 (MQ=255)                                                                                 aGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCgg                                                                     <  2:1547508/150‑1 (MQ=255)                                                                                  gATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGtt                                                                   <  1:816351/151‑1 (MQ=255)                                                                                  gATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑G‑AATTTTTTTA‑AATAAAAACC‑CCACTATTTTTTTCCGTGGGTCGGTTATTTCCTTTTTTCG‑GGGCTTCTTTTTTTC‑TT‑TCA‑CCACAAACgggt                                                                   >  2:1331843/1‑149 (MQ=255)                                                                                     tttGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTA‑AATGAACACCCCCCTTATTATTTTCCGCGGGTTGTTTT‑TTTTCTCTTTTTAGTGCTTCTTTTTTTC‑TT‑CCA‑CCCTAAACgggt                                                                   >  2:468136/1‑146 (MQ=255)                                                                                           tatCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑TA‑TTTTTTA‑AATGAACACCTCCCTTATTATTTTCATTGGGTTGTTTA‑TTTCATCTTTTTTATGCTTCTTTTTTAC‑TT‑CCA‑CCCTAACCGGtgtggggtt                                                            >  1:163972/1‑141 (MQ=255)                                                                                             tCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑ATTTTTT‑CATAAACAACTCCCTTATTTTTTTCAATGGTTCGGTTA‑TTTCTTCTTTTTAGTGGTTTTTTTTTAC‑TT‑ACC‑CCCCAACCCGTCCGGGGTTTGcc                                                        >  1:1093219/1‑150 (MQ=255)                                                                                               ttGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑ATTTTTT‑AATTAAAACCCCCCCTTTTTTTTTCCCTGGGTTGTTTT‑TTTCATTTTTTGAGTGGTTCTTTTTTTC‑TT‑TCC‑CCATAACCCGGTTGGGGTTctcctc                                                      >  1:698133/1‑146 (MQ=255)                                                                                               ttGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑ATTTTTA‑AATAAAAAACCCCCCTATTTTTTTCAGTGGGTCGTTTT‑TTTCATCTTTTTAGTGGTTCTTTTTTTCTTT‑CCC‑CCTAAACCGGTTGGGGtttgcat                                                        >  1:627061/1‑146 (MQ=255)                                                                                                 gTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTA‑TATTAAAAACTCCCCTATTATTTTCAATGGTTTGTTTT‑TTTCATCTTTTTAGGGCTTTTTTTTTTC‑TT‑TCACCCAAAACCGTTTGGGGGttgcat                                                        >  2:1359372/1‑144 (MQ=255)                                                                                                 gTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCg                                                    <  1:1420461/151‑1 (MQ=255)                                                                                                 gTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCg                                                    <  1:444348/151‑1 (MQ=255)                                                                                                       ttAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTTTT‑AATTAAAACCCCCCCTTTTTTTTTTATTGGGTCGTTTT‑TTTTTTCTTTTTTGTGCTTTTTTTTTTT‑TT‑TCC‑CCATAAACCGTTTgggggtttcatccctt                                                  >  1:117196/1‑134 (MQ=255)                                                                                                       ttAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑ATTTTTA‑AATAAAAACCCCCCTTTTTTTTTTCTATGGGTTGTTTT‑TTTCCTCTTTTTTGTGGTTTTTTTTTTC‑TTCCCC‑CCAAAACCGG‑TCGGGGTTCGCATccccttc                                                >  2:429532/1‑144 (MQ=255)                                                                                                        tagtagGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTacac                                              <  2:786036/150‑1 (MQ=255)                                                                                                         agtagGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACt                                             <  1:1027918/150‑1 (MQ=255)                                                                                                          gtagGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTc                                           <  2:42165/151‑1 (MQ=255)                                                                                                                      ccttccttTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAatat                               <  1:843620/151‑1 (MQ=255)                                                                                                                          ccttTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCt                            <  2:396864/150‑1 (MQ=255)                                                                                                                             tttCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGaa                         <  2:1321662/150‑1 (MQ=255)                                                                                                                               tCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAAt                       <  2:962567/150‑1 (MQ=255)                                                                                                                               tCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAAt                       <  2:1292223/150‑1 (MQ=255)                                                                                                                                cAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATg                      <  1:351132/150‑1 (MQ=255)                                                                                                                                      tGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTc                >  2:44446/1‑150 (MQ=255)                                                                                                                                       ggCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCAc              >  2:694659/1‑151 (MQ=255)                                                                                                                                          gg‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGt           <  1:339441/151‑1 (MQ=255)                                                                                                                                          gg‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGt           <  1:248498/151‑1 (MQ=255)                                                                                                                                           g‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGtt          >  2:818717/1‑151 (MQ=255)                                                                                                                                               aa‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTa         <  2:94557/150‑1 (MQ=255)                                                                                                                                                  ttttATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTATCACCGTTACTg      >  1:1183527/1‑151 (MQ=255)                                                                                                                                                     tata‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGAt    <  2:1375810/150‑1 (MQ=255)                                                                                                                                                      ata‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATgg  <  2:471396/151‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                            AGTTTTACTTTCTGCTCTCTGGAAACGCCTGCTTCTTTTTTACCTGAGAGCATTTTTTCGCATTCTGATTTCGTTAGTTTAGATTTTGAATATCTTGTCCAGTTAGTAGGAGTGCCACCTTCCTTTTCAATAGTGGCGG‑T‑AA‑TTTTATA‑CATGAACACCTCCATTATTATTTCCAGTGGTTCGTTTA‑TTCCATCTTTCGAGTGCTTCTTTTTCAC‑TT‑CCA‑CCATAACCGGTTCGGGATTCGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGG  >  NC_000913/1413589‑1413885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑