| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,580,634 | 0 | C | T | 42.7% | 128.2 / 36.1 | 91 | E277K (GAA→AAA) | hsdS | specificity determinant for hsdM and hsdR |
| Reads supporting (aligned to +/- strand): ref base C (10/41); new base T (38/0); total (50/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.63e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGAGCTCGAATAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAAGATAGATTCAAA > NC_000913/4580492‑4580781 | cGAGCTCGAATAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCt < 2:596483/150‑1 (MQ=255)cGAGCTCGAATAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCt < 1:321993/150‑1 (MQ=255) gAGCTCGAATAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTCACttttt > 2:1257985/1‑147 (MQ=255) gAGCTCGAATAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGa < 1:1401865/151‑1 (MQ=255) aGCTCGAATAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACttttt > 1:189786/1‑146 (MQ=255) gCTCGAATAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCCCtt > 2:1112307/1‑144 (MQ=255) cGAATAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTCACTTTTTGaa > 1:966366/1‑147 (MQ=255) cGAATAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACAt < 1:379674/150‑1 (MQ=255) tAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACTTTTTTAAAAtttt > 1:182651/1‑147 (MQ=255) tAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACCTTCTTAACAtttt > 1:250660/1‑147 (MQ=255) aaGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGa < 1:8894/151‑1 (MQ=255) gTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACTTTTTTTACATTCTAGaa > 1:1401466/1‑150 (MQ=255) gTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGaaa < 1:394541/151‑1 (MQ=255) gTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTGTCTGAACATTCTAGaaa < 2:1151295/151‑1 (MQ=255) tATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTATATTACTTTCTTAAAATTTTAaaaaac > 1:596383/1‑148 (MQ=255) tATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAAcc < 1:1194469/150‑1 (MQ=255) aTCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACTTTCTGAACATTCTAGaaa > 1:531550/1‑147 (MQ=255) aGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTATTTTACTTTTTTAAAAATCTAAAAAACGaa > 2:1100282/1‑149 (MQ=255) ataGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTTTTCACTTTTTTTACATTTTTGaaaaccaaaattggt > 2:422005/1‑139 (MQ=255) gCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTTTTTACTTTTTGAAAATTTTAAAAAACGAAAATAGttttt > 1:326244/1‑150 (MQ=255) aaTTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTATTTTACTTTCTTAACATTCTATAAACCAAATAATGttttttt > 2:310679/1‑147 (MQ=255) aaTTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTTACTTTTTTTAAATTTTAAAAAACGAAAATCGtttt > 1:893441/1‑147 (MQ=255) ttttGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTTTTTAAATTCTAGAAAACGAAAATCGTTTTGAttt > 1:795244/1‑148 (MQ=255) gATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACAt < 2:1115139/150‑1 (MQ=255) gATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATg < 1:956642/151‑1 (MQ=255) gttgtAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGGCT‑TTATTTAACTTTTCGAACA‑TCTCAAAACCGCAAATCTGTTTTTTCTCCATgg > 1:722035/1‑149 (MQ=255) gttgtAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGcc < 1:133009/151‑1 (MQ=255) aaTTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTTCTTTTTTAAACTTCTAAAAAAAGAATATTGTTTTTATTTATATTGCCAg > 2:314096/1‑148 (MQ=255) aaTTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCAc < 1:1102428/151‑1 (MQ=255) aaTTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCAc < 2:590155/151‑1 (MQ=255) ttttttCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTTACTTTTTGAACATTCTAGAAAACAAATATCGGTTTTATTTACATTGgcagca > 2:104649/1‑148 (MQ=255) tttttCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACTTTTTGTACATTCTAGAAACCGAATATCGTTTTTTTCTACATGGCCAGCAc > 1:808074/1‑148 (MQ=255) ttttCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTa < 2:1449805/150‑1 (MQ=255) ttCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACa < 1:890429/150‑1 (MQ=255) aaTAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAAc < 1:928513/151‑1 (MQ=255) aTAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACTTTTTGAAAATTCTAGAAAACGAATATAGTTTTTATTTACATGGCCAGCCCGGACaaaa > 1:535376/1‑149 (MQ=255) tAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTTACTTTTTTAACATTCTAGAAAACGAATATTGTTTTTATTTACATTGCCAGCACGTACAGa > 2:524442/1‑147 (MQ=255) aaCCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTTACTTTCTTAAAATTCTTGAAAACCAAAATCGTTTTTTTTTTCATTGCCCGCACGCACAGa > 2:148556/1‑146 (MQ=255) aCCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTTTTTACTTTCTTAACATTCTTGAAACCGAATATCGTTTTTTTCTACATTGCCAGCACGTACAGAACTaa > 1:588960/1‑150 (MQ=255) aCCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAAt < 1:1115096/151‑1 (MQ=255) ccACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTTTTTCCTTTCTTCAAATTTTATAAAACGAATATCGTTTTTTTTTACATTGCCAGCACGCACAGAACTaa > 1:1493546/1‑148 (MQ=255) ccACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTTTTTACTTTCTTAAAATTCTTCAAAACCAATATCGTTTTTTTTTTAATTGCCAGCACGTAAAGAACTa > 2:201320/1‑147 (MQ=255) ccACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACTTTTTTAACATTTTAAAAAACCAAAATTGTTTTTATTTACATTGCCAGCACggaaaaaaataaatc > 1:1488749/1‑137 (MQ=255) ccACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACTTTTTTAAAATTTTAGAAAACGAAAAATGTTTTTATTTACATGGCCAGCAAGTACAGaaaaaa > 2:1528839/1‑144 (MQ=255) ccACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTTACTTTCTTTAAATTCTATAAAACAAATATTGTTTTTTTTTAAATAGCCGGCACCCacaaaacaaaac > 2:459860/1‑148 (MQ=255) cacaAACACCAACAAATTCTAAACTTCCGTTATAACGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCg < 1:74875/151‑1 (MQ=255) caacaaATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTCTTTTTTTTTTCAACATTGCATAAAAACAATATTGTTTTGATTTACAATGCCCGCACGTTCAGCACTaacgagttgcatt > 2:9571/1‑138 (MQ=255) acaaATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACTTTCTTAACATTCTTGAAAACGAATATCGTTTTTATCTACATGGCCAGCACGTACAAAAATAATGCGTAGGAtttggt > 1:504807/1‑147 (MQ=255) acaaATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGAt < 1:1316748/151‑1 (MQ=255) caaATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACTTTCTTTACATTTTTGAAACCGGAAATCGTTTTTTTTTTCATGGCCCGCACATACAAAAATAATGCGTAGTAtt > 1:591405/1‑146 (MQ=255) aaaTTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTCACTTTTTGTACATTTTTGAAAACCAATATTGTTTTTATTTACATGGGCAGCACGGACAGAAATAAATGGTAGTAtttg > 1:1130094/1‑145 (MQ=255) aaaTTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGa < 1:775970/151‑1 (MQ=255) aaaTTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGa < 2:344331/151‑1 (MQ=255) aaTTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGAc < 1:487430/151‑1 (MQ=255) tCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCa < 2:1407945/150‑1 (MQ=255) cTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTTCTTTTTTAAAATTCTATAAACCGAATATTGTTTTTATTTACATTGCCAGCACGTACAAAACTAATACGTAGAAtttg > 2:114603/1‑140 (MQ=255) cTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTTACTTTTTTAAAATTCTATAAAACGAATATAGTTTTTATCTACATGGCCAGCACCTACAAAAATAAAGCGGAGTATTGGATGACCa > 2:882380/1‑149 (MQ=255) aaCTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAAcacc < 2:1044539/151‑1 (MQ=255) tCCGTTATTGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAAcaccaat < 2:163189/150‑3 (MQ=255) gTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACTTTTTTAACATTCTAGAAAACGAATATCGTTTTTATTTTCATTGCCAGCACGTACAGAAATAATGCGTAGTATTTGATGAACAAAACCACttt > 1:599949/1‑149 (MQ=255) gTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTTACTTTTTGAACATTCTAGAAAAAAAATATCGTTTTGATCTACATGGCCACCCCATACAAAAATAATGCGTAGTTTTTGATGACCaaaaacccctt > 2:1482638/1‑140 (MQ=255) gTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCa < 2:1506392/151‑1 (MQ=255) gTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCa < 1:215377/151‑1 (MQ=255) tataGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTAATTTTTTAACATTCTAAAAAACAAAAATAGTTTTTTTTTACATTGCCAACACGTACAAAAACAAATCGTAGTATTTGGTGACCAACACCACttttttt > 2:1168981/1‑147 (MQ=255) aGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTg < 1:361086/150‑1 (MQ=255) gAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGTTTACTTTTTTAAAAATCTAGAAACCGAATATTGTTTTTTTCTTCATGGGCCGCACGGACAAAAATAATACGTAGTATTTGATGACCAACACCACTTTCATTTTGCtt > 1:553073/1‑151 (MQ=255) gAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTATTTTAATTTTTGGACATTTTAGAAAACGAAAATACTTTTTTTCTTCATGGCCCGCACGTACAGAACTAATGCGGAGTATTTGAGTATCAAAACCACATTTCTTTGGcgt > 1:294767/1‑149 (MQ=255) aGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCttt < 2:707162/151‑1 (MQ=255) gTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTTTTTACTTTTTTAAAATTCTTTAAAACCAAAATCGTTTTTTTTTTCATGGCCAGCCCGTACAAAACTAATGCGTAGTATTTGATGAACAAAACCACTTTCATTTTGCt > 2:514287/1‑148 (MQ=255) aaataaaAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTTGCTTCCATTCTTAAACTTTTATAAAACACATAACGTTTTTTTTTTCATAGCCCGGACGTACAGAACTAATGCGTAGGATTTGTTGACCAAAAACCCCTTCTTTTGGtttt > 2:1303147/1‑148 (MQ=255) ataaaAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTTCCTTTCTGAAAATTTTTGAAAACCAATATCGTTTTGTTTTACATGGGCAGCACGTACAGAACTAATGCGTAGGATTGGGTGACCAACACCACcttttttttggttt > 1:1254441/1‑135 (MQ=255) ataaaAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACGTTCATTTGGCTTtgatga < 2:1223672/151‑1 (MQ=255) aaaGATCTCCATCTTGTAATTTGTGGCGG‑G‑TTAGTTTACTTTTTTAAAATTCTTGAAAACGAATAATGGTTTTTTTTTCAAGGTCATCCCGTACCAAACTAAATCGTAGTATTTTATGAACCAAACCCCCTTCTTTTGGGTTTTATGgaa > 2:142303/1‑150 (MQ=255) aGATCTCCATCTTGTAATTTGTGGCGG‑TATTTGTT‑TCTTTCTGTAACTTTTAAAAAACCAATATCGTTTTTGTTTAAATGGCGAGCCCGTATACAAATAAAATGTAGTGTTGTATGAACAACAACACTTTTATTTTGCtttttttgaaaa > 2:1477774/1‑141 (MQ=255) gATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAATTTACTTTCTTAACATTTTAGAAAACGAATATAGTTTTGATCTACAAGGCCAACACCTACAGAACTAATGCGGAGTATTGGGTGACCCACACCCCCTTTATTTTGCTTTGATGGAAAAc > 1:967401/1‑150 (MQ=255) ccATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTAc < 1:887609/151‑1 (MQ=255) tGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGt < 1:1461913/147‑1 (MQ=255) gTAATTTGTGGCGG‑T‑TTAGTTTACTTTTTGAACATTCTAGAAAACGAATATCGTTTTGTTTTTCATTGCCCGCACCTACAGAAATAATTCGTAAGATTTGATTACCCACACCCCTTTTATTTTGGTTTGATGAAAAAACAATACGTaaat > 2:202841/1‑148 (MQ=255) gtgGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTaa < 2:323012/150‑1 (MQ=255) gtgGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAag < 1:1304569/151‑1 (MQ=255) ggCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAagat < 2:649815/151‑1 (MQ=255) gCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAagata < 2:41848/151‑1 (MQ=255) gCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAagata < 2:1379768/151‑1 (MQ=255) cGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAagat > 1:1530601/1‑149 (MQ=255) gg‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAagataga < 2:943154/151‑1 (MQ=255) gg‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAagat > 2:693159/1‑148 (MQ=255) g‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAagatagat < 2:159223/151‑1 (MQ=255) ttAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAAGATAGATTc > 2:872171/1‑151 (MQ=255) aGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAAGATAGATTCa > 2:425159/1‑150 (MQ=255) aGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAAGATAGATTCa < 1:1453334/150‑1 (MQ=255) gTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAAGATAGATTCaaa < 1:422022/151‑1 (MQ=255) | CGAGCTCGAATAAGTTTATCAGGATATAGCAAATTTTGATGTTGTAATTTTTTCAATAACCCACAAACACCAACAAATTCTAAACTTCCGTTATAGCGAGTAAATAAAAGATCTCCATCTTGTAATTTGTGGCGG‑T‑TTAGTTCACTTTCTGAACATTCTAGAAACCGAATATCGTTTTGATCTACATGGCCAGCACGTACAGAACTAATGCGTAGTATTGGATGACCAACACCACTTTCATTTGGCTTTGATGAAAGACCATTACGTAATTCAGTTAAGATAGATTCAAA > NC_000913/4580492‑4580781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |