| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,640,981 | 0 | C | T | 48.1% | 55.1 / 47.5 | 81 | F40F (TTC→TTT) | dtpB | dipeptide and tripeptide permease B |
| Reads supporting (aligned to +/- strand): ref base C (10/32); new base T (39/0); total (49/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.11e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGC > NC_000913/3640841‑3641132 | ggTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGtttttttttttaaa > 1:443304/1‑143 (MQ=255)ggTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTT‑GTTtaaa > 1:937561/1‑150 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGGTTTTCTTC‑GTTaaca > 2:55078/1‑149 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GTTtaaaa > 1:10721/1‑149 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTCTGTTaaaa > 2:1022441/1‑150 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAAc < 1:826364/150‑1 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAAc < 1:1073804/150‑1 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAAc < 2:413739/150‑1 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTttctttttttaaaa > 1:852791/1‑142 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTT‑GTTtaaaa > 1:263171/1‑149 (MQ=255) gTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTC‑TTTtaaaa > 1:145028/1‑149 (MQ=255) gTATTGGAAGGCTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACTGCGTGCAGGGCGTACTGGC‑GGGTttgtttctttataa > 2:758472/1‑142 (MQ=255) ggTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGTCGTGCAGGGCGTACTGGC‑GGGTTTTTTT‑GTTTAACAACtctgcgt > 2:185783/1‑145 (MQ=255) ggTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GTTTAACAGCTTGGGtt > 1:109290/1‑151 (MQ=255) ggTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GTTTAAAAACtttggtt > 1:1077949/1‑146 (MQ=255) ggTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GTTAAAAAGCtttggtt > 2:531032/1‑146 (MQ=255) ataaataTGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTT‑GTTAAACACCTTTGGTtctcc > 2:111532/1‑149 (MQ=255) atatGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGG‑GGTTTTCTTT‑GTTAAACAACATGGGTTTTCTCaaaa > 1:942939/1‑149 (MQ=255) atatGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTT‑GTTAAAAAGCTTGGGGTCTCGCAaga > 1:633810/1‑151 (MQ=255) tatGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑TTTTAAAAACTTGGGTTTTTGCAagag > 1:1178094/1‑151 (MQ=255) tatGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑CTTTAAAAACTTTGGTTTTCCCAagag > 1:824000/1‑151 (MQ=255) tatGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTC‑TTTTAAAAACTTggggtttcgccaaag > 1:503264/1‑138 (MQ=255) tatGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGCGCAGGGCGGGCTGGC‑GGCTTTTTTC‑TTTAAAAAGCCTgggatttcccaaaag > 1:269083/1‑138 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGGTTTTTTTG‑TTTAAAAACCTTGGGtttctgaagagccg > 2:1102057/1‑139 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTC‑GTTTAAAAACTTTGATTTTCGCCAGAGCAg > 2:992874/1‑151 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTT‑GTTTAACAGGTTGGGTTTTTGCAAAAGCAg > 1:632058/1‑151 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTT‑GTTTAAAAGCTTGGGTTTTCGCAAGAGCAg > 1:878801/1‑151 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTT‑GTTAAAAACCCTGGAATTCCTCAAgaggag > 1:456763/1‑151 (MQ=255) gAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATATTTTTTGGCGAGTTATGGGAGCGATTCGGCTACTACGGCGCGCAGGGCGTACCGGC‑GGGTTTCCTT‑CTTTAACAGCGTTGGTGTTCGCAAGAGCAg > 1:559816/1‑151 (MQ=255) caccaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTTAACAGCTTGGGTTCTCGCACGAGAAGGC‑ttt > 2:5220/4‑151 (MQ=255) caacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑TTTTAAAAAGTTGGGTTTTCCCCAAAGCAGGG‑ttt > 1:88931/1‑151 (MQ=255) caacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTT‑GTTAAAAAACCTGGGTTTTCGGAAAAGGAGGG‑ttt > 1:294578/1‑151 (MQ=255) caacaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTT‑CTTAAACAGCCTTGGTTTTCGCCAAAGCAGGC‑gtt > 2:373224/1‑151 (MQ=255) acaacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTT‑GTTTAAAAACTTTGGTTTTCGCAAGAGCAGGG‑ttttt > 1:843442/1‑150 (MQ=255) caacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGt < 1:830632/151‑1 (MQ=255) aacaCCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTc < 2:1051207/151‑1 (MQ=255) cacCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTCGTC‑Ac < 2:280126/151‑1 (MQ=255) cccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GTTAAAAAGCTTGGGTTTTCGCAAAAGCAGGG‑TTTTTTC‑CCtt > 1:203412/1‑151 (MQ=255) cccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTC‑GTTTAAAAACTTTGGTTCTCGCAAAAGCCGGC‑gtttttttctt > 2:143940/1‑144 (MQ=255) cccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTT‑TTTTTACAACTTTGATTGTCCGCAGAGCAggggttttttcctt > 2:798162/1‑139 (MQ=255) ccATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTC‑TTTTAAAAACTTTGGTTTTCTCCAGAGCGGGG‑tttttttccttt > 1:674485/1‑143 (MQ=255) cATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTC‑GTTCAACAGCTTTGGTTCTCCCCAGAGCCGGG‑CTTTGTC‑TCcttt > 2:584509/1‑151 (MQ=255) cATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAAc < 1:764686/113‑1 (MQ=255) gcagcaACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCTTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GTTTAACAGCCTGGGTTCTCTCAACACCAGGC‑TTTTTTT‑CCTTTTGGTTGttttttt > 1:477150/1‑148 (MQ=255) aaCCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGGTTTTTTTC‑TTTAAA‑AACTTGGGTTTTCGCAAGAGAAGGC‑TTTTTTC‑ACTTTTTGGGCTTTttctggg > 1:1013913/1‑147 (MQ=255) tCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTc < 1:993305/151‑1 (MQ=255) cATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑gg < 2:277293/151‑1 (MQ=255) cATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑gg < 1:906675/151‑1 (MQ=255) tttttCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GTTTAACCGCTTTGGTTTTCCCCAGAGCAGGC‑CTTTTTT‑ACTTTTTTTGCTTTTTCTTCGCTGGTCTTT‑GGc > 1:193769/1‑150 (MQ=255) tttttCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTTAAAAACTTGGGTTTTCGCAAGAGCAGGG‑TTTTGTT‑ACTTTTGGTGGTTTTTCTGCGCTGGGCTAT‑TGc > 1:694017/1‑150 (MQ=255) tttttCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGcc < 1:340904/151‑1 (MQ=255) aTGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTCAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCAttt < 1:735698/151‑1 (MQ=255) gATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GTTTAACAACTTGGGTTTTCGCAAGAGCAGGG‑TTTTTTT‑ACTTTTTGGGGTTTTTCTGCGCTGGGCTTT‑TGCCCCAtttt > 1:795347/1‑149 (MQ=255) aTCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GTTTAAAAGCTTGGGTTTTCGCCAAAGGAGGC‑TTTTTTT‑ACTTTTTGGGGTTTTTCTGGGCTGGGCTTT‑GGGCTCCTTTTCa > 1:463430/1‑151 (MQ=255) tttGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTggcg < 2:284746/151‑1 (MQ=255) tttGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTggcg < 2:1084736/151‑1 (MQ=255) ttGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTggcgg < 1:949250/151‑1 (MQ=255) aGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGGTTTTTTTC‑GTT‑AACAGGTTTGATTTTCGCAAGAGCAGGCGTTTTTTC‑CCTTTT‑GCGCTTTTTCTGCGCTTGTCTAT‑GGGCTCATTTTCA‑TTtgcgggggttt > 2:880363/1‑145 (MQ=255) aGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GTTCAACAGCCTGGGATTTCGCAAAAGCAGGC‑TTTTTTCTTCTTTTGGT‑CTTTTTCTGCGCTTGGGTAT‑GGCGTCATTTTCA‑TTggcggggtttt > 2:780341/1‑145 (MQ=255) ttATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGt < 1:409766/149‑1 (MQ=255) aTGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGc < 1:1057363/151‑1 (MQ=255) aTGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTT‑CTTAAACAACTTGGGTTTTCGCCAGAGCAGGC‑TTTTTTC‑CCTTTTTGGGCTTTTTCTTCGCTGGTCTCT‑GGCCTCCTTTTCATTTGGGGGCTTTTTCgg > 1:1037122/1‑151 (MQ=255) gAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGac < 2:953235/150‑1 (MQ=255) ggCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GTTAAACAGCTTGGATTCTTGCCAGGGCAGGG‑TTTTGTT‑ACTTTTTGGGGTTTTTGTGGGCTGGGCTATGGGCCCCTTTTCCT‑TTGG‑GGGTATTTTGGGGACCACCCTCTgg > 1:901401/1‑151 (MQ=255) ggCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTTAACCACTTTGGTTTTTGCAAGAGGAGGC‑TTTTGTT‑ACTTTTTGTGCTTTTGTTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTTGGTGagcacccta > 2:906148/1‑145 (MQ=255) actacGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGAc < 2:937167/151‑1 (MQ=255) actacGGCGTGCAGGGCGTACTGGC‑GGGTTTTTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGG‑TTTTTTC‑ACTTTTGGGGCTTTTTCTGCGCTGGGCTAT‑GGCCTCCTTTCCA‑TTTGGGGGTATTTTGGGGgccaccccccgggggg > 1:993964/1‑141 (MQ=255) ctgcGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGAcc < 2:108891/148‑1 (MQ=255) ctacGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGAc < 1:584905/151‑1 (MQ=255) ctacGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGAcc < 2:1058747/151‑1 (MQ=255) ggCGTGCAGGGCGTACTGGC‑GGTTTTTTTC‑GTTAAAAAGCTTGGGTTTTTGCAAAGGCAGGC‑GTTTTTC‑CCTTTTGGTGTTTTTTCTGCGCTGGGCTAT‑GGGCTCCTTTTCA‑TTGGCGGCTATTTCTGCGGCCCCCCCCTggggggccaaa > 1:34919/1‑144 (MQ=255) gCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAAc < 1:313239/150‑1 (MQ=255) gTGCAGGGCGTACTGGC‑GGTTTTTTTT‑GGTAAACAGCTTGGGTTTTCCCAAGAGCAGGG‑TTTTTTC‑CCTTTTTGTGCTTTTTTTGCGCCGGTCTAT‑GGCCCCCTTTCCA‑TTTGCGGGTTTTTCGGCGGCCCCCCCCCTGGGGCCAAACGc > 1:557192/1‑150 (MQ=255) cGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGt < 1:579805/150‑1 (MQ=255) tACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTc < 2:294488/150‑1 (MQ=255) tACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTc < 1:410889/150‑1 (MQ=255) tACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTc < 2:96569/150‑1 (MQ=255) tACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTc < 1:845267/150‑1 (MQ=255) tACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTAATTTCCG‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTc < 1:268745/150‑1 (MQ=255) ggC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGa > 1:1136406/1‑151 (MQ=255) ggC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGAACACCTGCTGGGGACCAAAAGCAACATTGTTCTTggg > 1:813919/1‑150 (MQ=255) gC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGa < 2:535972/150‑1 (MQ=255) gC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGa < 2:787247/150‑1 (MQ=255) ttttCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCAc < 2:1146107/150‑1 (MQ=255) cttc‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GG‑CTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGc < 2:109261/151‑1 (MQ=255) | GGTATTGGAAGGTTAATAAATATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGC‑GGTTTTCTTC‑GTTAAACAGCTTGGATTCTCGCAAGAGCAGGC‑TTTTGTC‑ACTTTTGGTGCTTTTGCTGCGCTGGTCTAT‑GGCCTCATTTCCA‑TTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGC > NC_000913/3640841‑3641132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |