| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 300,711 | 0 | G | C | 45.6% | 111.4 / 51.0 | 79 | P75R (CCG→CGG) | paoC | PaoABC aldehyde oxidoreductase, Moco‑containing subunit |
| Reads supporting (aligned to +/- strand): ref base G (11/32); new base C (36/0); total (47/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.73e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCCTGTTCGAAGGTCTCGGCCACTACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTC > NC_000913/300566‑300859 | cgcCTGTTCGAAGGTCTCGGCCACTACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGgcgc < 1:263743/150‑1 (MQ=255) gTCTCGGCCACTACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTTTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAACCCCAACGCCCCGCGCCTTTTTTGCGGCGt > 2:298314/1‑151 (MQ=255) ggCCACTACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCCGTACGCCCCGCGCCTTTTTCGCGGCGGcccga > 2:922202/1‑148 (MQ=255) gCCACTACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGACAGCCACTACCCCCCGCGCGCTTTTTGCGGCGGCC‑GCA‑t > 1:983301/1‑151 (MQ=255) ccACTACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑c < 1:1086875/151‑1 (MQ=255) cACTACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑a < 2:60748/151‑1 (MQ=255) cTACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGAAAACCCCTACCCCCCCCCCTTTTTTTGCGGCGGGC‑GTA‑ttcaa > 1:335596/1‑147 (MQ=255) cTACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGACAACCCGCACGCCCCGCGCCTTTTTCGCCGGGGCC‑GTA‑T‑C‑CAg > 2:350145/1‑151 (MQ=255) tACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAgg < 2:1120188/151‑1 (MQ=255) tACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAgg < 2:1055375/151‑1 (MQ=255) aCCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAggg < 1:478363/151‑1 (MQ=255) aCCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGACAGCCAGGAAGCCCCGCGCCTTTTTCGCGGCGGCC‑CGA‑T‑T‑AAggg > 2:1233161/1‑151 (MQ=255) gcAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGACAGCCCGTACGCCCCGCGCTTTTTTTGCGGGGGCC‑GGATT‑C‑AAgggggggg > 2:774636/1‑149 (MQ=255) cAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGa < 1:187594/150‑1 (MQ=255) ggCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCCGTACGCCCCGCGCCTTTTTCGCGGGGTCC‑GTA‑T‑C‑CAAGGCGGGGG‑GGCgg > 1:338284/1‑150 (MQ=255) ggCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGATACCCAGCAACCCCCGCGCCTTTTTCGCGGGGCCC‑GCG‑T‑C‑TAAGGCGGGGG‑GGCgg > 1:807305/1‑150 (MQ=255) gCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACCCCCCGCCCCTTTTTCGCGGCGGCC‑CGA‑T‑C‑AAAGgggggggggggg > 2:90406/1‑142 (MQ=255) tgatgaTAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑gg < 1:1035801/144‑1 (MQ=255) tgatgaTAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGACCGCCAGTACCCCCCGCGCCTTTTTCGCGGCGGCC‑GTA‑T‑C‑CAggggggggggggtgtgt > 2:1036309/1‑139 (MQ=255) gatgatAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGGGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTGAATATAGCCAATACGCCCCGCGCTCTTTGCGCGGCGTCC‑GGG‑T‑A‑AAGGGCGGGGA‑gggggcccgt > 1:2464/1‑143 (MQ=255) tgatAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCCGTACGCCCCGCGCCTTTTTCGCGGGGGCC‑GTT‑T‑C‑CAGGGGGGGGG‑GGGGT‑CC‑ttttg > 2:847495/1‑149 (MQ=255) tgatAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGAAAACCAGTACGCCCCGCGCCTTTTTTGCGGCGGCC‑GGA‑T‑C‑AAAGGGGGGGG‑GGGGG‑CC‑CTTgg > 2:504584/1‑151 (MQ=255) tgatAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGCGTTTTTGTCGCCTTTGCCGAGCGCCCCCGCGTTACTGGCGGTCATTACAGCCCCTATGCCCCGTCCTTTTTTCGCGGCGCCC‑GGC‑T‑C‑CAGGGTGGGGC‑AGCGT‑CC‑ctttg > 1:1313212/1‑149 (MQ=255) atAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAAAGAAAACCCGGCCGCCCCGCGCCTTTTTTGCGGGGGCC‑GGA‑T‑C‑CAGGGGGGGGG‑GGGGTCCC‑TTTgga > 2:643760/1‑150 (MQ=255) gTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACCCCCCGCGCTTTTTTGGCGGGGGCC‑CGA‑T‑T‑AAGGGGGGGGG‑GGGGG‑CCTTTTGGCaag > 2:920402/1‑150 (MQ=255) gTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGGAAGAACGCCCGTACACCCCGCGCCTTTTTTCCGGGGGCC‑GTA‑TCC‑AAGGGGGGGGG‑GGGTC‑CC‑TTTgggatg > 1:1406619/1‑147 (MQ=255) gTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAAAGACAGCCCGGACGCCCCGCGCCTTTTTTGCGGGGGCC‑GCG‑TCC‑AAGGGGGGGGG‑GGGGC‑CC‑TTTGGCatg > 2:923595/1‑149 (MQ=255) gTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAAAGAAAACCCATACGCCCCGCGCTTTTTTGGCGGGGGCC‑CTA‑T‑CAAAGGGGGGGGG‑GGGGC‑CC‑TTTGCCaag > 2:1078857/1‑150 (MQ=255) cTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCg < 2:119702/151‑1 (MQ=255) cAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAggg < 2:249024/123‑1 (MQ=255) cAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATAACAACCCGTACCCCCCGCGCCTTTTTCGCCGCGGCC‑GGA‑T‑C‑AAGGGGGGGGG‑GGGGG‑CC‑CTTTTCCATGGCggg > 1:485846/1‑150 (MQ=255) aTAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCCGTACCCCCCGCGCTTTTTTCGCGGCGCCC‑GGC‑T‑C‑AAAGGGGGGGG‑GGGGG‑CC‑ttttggcatgggggga > 2:599474/1‑137 (MQ=255) aTAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAAc < 1:274112/151‑1 (MQ=255) aTAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATTACAGGCAGTACGCCCCGCGCTTTTTTTGCGGGGGCC‑GCATT‑A‑AAGGGGGGGGG‑GGGGC‑CC‑TTTGGGAA‑GGCggga > 2:444932/1‑148 (MQ=255) aTAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATTACAAGCAGTACCCCCCGCGCCTTTTTTGCGGGGGCC‑GGA‑T‑C‑AAGGGGGGGGG‑GGCGG‑CC‑ttttgggaagggggga > 2:668648/1‑137 (MQ=255) aTAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGTAAACCAGTACGCCCCGCGCCTTTTTGGCGGCGCCC‑CGA‑T‑C‑CACGGGGGGGG‑GGCGTGCC‑TTTGGAAAGGGGGGaa > 1:1028186/1‑151 (MQ=255) tAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATTACAGCCCGTACCCCCCGCGCCTTTTTCGCGGCGGCC‑GTC‑T‑C‑CAGGGCGGGGG‑GGCGG‑CC‑TTTTGccaatgcgggaa > 1:1076836/1‑139 (MQ=255) gccgccTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGat < 2:1090864/150‑1 (MQ=255) ccgccTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGatat < 2:830841/151‑1 (MQ=255) ccgccTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGAAAACCAGGACGCCCCGCGCTTTTTTCGCGGGGTCC‑CGA‑TCC‑AAGGGGGGGGG‑GGGGC‑CC‑TTT‑GCCATGGCGGGACCCACGatat > 2:734723/1‑151 (MQ=255) gccTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATTACAGCCCGTAAGCCCGGCGCTTTTTTCGCGGCGGCC‑GTC‑T‑C‑CAGGGGGGGGG‑GGGGG‑CCTTTTGGCAAGGGGGGAA‑CGGCGATATAg > 2:1188272/1‑151 (MQ=255) gccTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGAAAACCCGTACCCCCCGGGCTTTTTTCGCGGGGGCC‑GGA‑T‑C‑AAAGGGGGGGG‑GGGGT‑CC‑CTTTGCCATGgggggaaccccgaaaaaa > 2:662892/1‑137 (MQ=255) gccTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGTATGAAAGCCCGGACGCCCCGCGCCCTTTTTGCGGCGGCCGGTT‑C‑C‑AAGGGGGGGTG‑GGGGC‑CC‑TTTGGCATGGGCGGGAccgccggataa > 1:1268968/1‑146 (MQ=255) gccTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATTTCAACCACGACGCCCCGCGCTTTTTTTGCGGGGTCC‑CGC‑T‑C‑AAAGGCGGGGA‑GGGGT‑CC‑CTTGGCGAAGGCGGGAACCACGGtataa > 1:1315744/1‑150 (MQ=255) gccTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAAAGTCAACCACTACGCCCCGCGCTTTTTTCGCGGCGGCC‑GCC‑T‑C‑AAGGGCGGGGC‑GGCGG‑CC‑CTTGGCATTGTCGGTAGCGACGCTACAg > 1:1127741/1‑151 (MQ=255) ccTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGc < 1:297006/151‑1 (MQ=255) tAACAGCCTGGCGGTGTTTTTGTCGCTTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAAAGAGAAACAAGACCCCCCGCGCTCTTTTCCCGGCGCCC‑CAA‑G‑T‑AAGGGGGGTGAGGGCTC‑CC‑TTTGGC‑ACGGGGGAACCGACGATATAAcc > 2:982742/1‑150 (MQ=255) gCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGGACGCCCGGCGCTTTTTTCGCGGCGTCC‑GTA‑T‑C‑AAGGGGGGGGG‑GGCGG‑CC‑TTTGGGCAAGGCGGGACCGGCGATATAGCCCTaagg > 2:39204/1‑148 (MQ=255) cGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGt < 1:64276/150‑1 (MQ=255) tttttGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTgggg < 2:1006400/150‑1 (MQ=255) tGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGcttc < 2:1081655/151‑1 (MQ=255) tCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGcttctt < 1:1443498/151‑1 (MQ=255) cGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCttcttc < 1:871128/151‑1 (MQ=255) ccTTTGCCGAGTGCCCCGGCGTTACTGGCGGTTATGGCAGTCACTACCCCCCGCCCCTTTTTCGCGGGCTCC‑GCA‑T‑C‑AAAGGCGGTGA‑TGCGC‑CC‑TTTTGGAATTGCGGAACCCACGAAATAGCCAGAAGCGGCGGTGGGGGctgtttt > 1:187808/1‑144 (MQ=255) ccTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATAATAGCCAGTACGCCCCGCGCTTTTTGCGCGGGGGCC‑GCA‑C‑C‑AAGGGGGGGGG‑GGCGT‑CC‑CTTGGCAATGGCGGGAACGCCCGAATATCCCTAGGCGGCCGCGGGGGGgtcttc > 2:26279/1‑149 (MQ=255) ccTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGACAGCCAGGACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑T‑AAGGGGGGGGG‑GGGGG‑CC‑TTTGGCAATGGGGGGAACGACGATATAGCCATAGGGGGGGGTGGGGGggtcttt > 2:699595/1‑148 (MQ=255) tttGCCGAGTGCCCCGGCGTTACTGGCGGTAATGAAAGCCAGTACGCCCCGCGCTTTTTTCGCGGCGGCC‑GGA‑T‑C‑AAGGGGGGGGG‑GGGGT‑CC‑TTTGGCAATGGGGGGACCGACGATATAGCCATAGGGGGCGGTGGGGGGTTCTTCTTg > 2:1487488/1‑150 (MQ=255) tGCCCCGGCGTTGCTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGt < 2:1177771/149‑1 (MQ=255) gCCCCGGCGTTACTGGCGGTAATTACAACCCCGACGCCCCGCGCCTTTTTCGCGGCGTCC‑CCA‑T‑C‑AAAGGCGGGGA‑GGGGT‑CC‑TTTGGCAATGGCGGGAACCACGATATAGACCTAGGCGGCGGTGGGGGCGTCTTCATGCCCTTCGTAgg > 1:190702/1‑151 (MQ=255) ccccGGCGTTGCTGGCTGTAATGGCAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGGCGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAgg < 1:1481566/150‑1 (MQ=255) ccccGGCGTTGCTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGG‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAgg < 2:907502/150‑1 (MQ=255) ccccGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAgg < 1:302656/150‑1 (MQ=255) cGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGcg < 2:878823/151‑1 (MQ=255) cGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGcg < 1:594516/151‑1 (MQ=255) cGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGcg < 1:704991/151‑1 (MQ=255) ttACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGcgt < 1:1465719/150‑1 (MQ=255) cTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGGAGcgtgccg > 1:1305289/1‑151 (MQ=255) ggCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGcgtgccgtg > 2:609823/1‑151 (MQ=255) cGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGcgtgccgtgc < 2:1168288/150‑1 (MQ=255) tAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCggg > 1:410990/1‑150 (MQ=255) aTGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGGAg > 2:877137/1‑151 (MQ=255) aGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGtttt > 2:755496/1‑150 (MQ=255) aGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGtttt > 2:863241/1‑150 (MQ=255) ccAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTc < 2:106916/149‑1 (MQ=255) gTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCgg > 2:625896/1‑151 (MQ=255) gTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCgg > 2:1437813/1‑151 (MQ=255) tACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGc < 1:612237/148‑1 (MQ=255) tACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGc < 1:1349251/148‑1 (MQ=255) ccGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTc < 2:516786/151‑1 (MQ=255) | CGCCTGTTCGAAGGTCTCGGCCACTACCAGCGCAATGGCCTGATGATAGTGCTCAATAGTGGGGCCGCCTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCC‑GTA‑T‑C‑AAGGGCGGTGA‑GGCGT‑CC‑TTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTC > NC_000913/300566‑300859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |