| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,815,811 | Δ1 bp | intergenic (‑43/+23) | pyrE ← / ← rph | orotate phosphoribosyltransferase/ribonuclease PH (defective),enzyme, Degradation of RNA, RNase PH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,815,811 | 0 | C | . | 100.0% | 71.1 / NA | 17 | intergenic (‑43/+23) | pyrE/rph | orotate phosphoribosyltransferase/ribonuclease PH (defective),enzyme, Degradation of RNA, RNase PH |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (8/9); total (8/9) | |||||||||||
AAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCC > NC_000913/3815730‑3815941 | aaGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAt < 2:274958/139‑1 (MQ=255) cgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGga > 2:196177/1‑139 (MQ=255) ggCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGc < 1:308682/139‑1 (MQ=255) tatGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCca < 1:313960/139‑1 (MQ=255) aTGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGa > 1:217545/1‑139 (MQ=255) tGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAg < 2:217545/139‑1 (MQ=255) tCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTc > 2:83814/1‑50 (MQ=255) tCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTc < 1:83814/50‑1 (MQ=255) tCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTg > 1:55427/1‑84 (MQ=255) tCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTg < 2:55427/84‑1 (MQ=255) tcctcATCTTACTTTTCTACAGACAAAAAAATGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCATCGCGACAATAGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAg < 2:335923/130‑1 (MQ=255) tcctcATCTTACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCATCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAg > 1:335923/1‑130 (MQ=255) ttACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGcgcc > 1:437/1‑64 (MQ=255) ttACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGcgcc < 2:437/64‑1 (MQ=255) tACTTTTCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGaa > 2:422483/1‑139 (MQ=255) tCTACAGACAAAAAAAAGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTc > 1:311546/1‑139 (MQ=255) aaaaaaaGG‑GACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTCCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAAAGGCTCGCCTTCTGcc < 1:334867/139‑1 (MQ=255) | AAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCC > NC_000913/3815730‑3815941 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |