| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,977,182 | Δ1 bp | coding (584/1032 nt) | galR → | galactose‑inducible d‑galactose regulon transcriptional repressor, autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,977,182 | 0 | T | . | 100.0% | 163.5 / NA | 38 | coding (584/1032 nt) | galR | galactose‑inducible d‑galactose regulon transcriptional repressor, autorepressor |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (20/18); total (20/18) | |||||||||||
ACCGTTGTATTGCTCTGGACGATCGTTACGGTGCCTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTCTGCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCAATGACCGAGCTTTTGGGACGAGGAAG > NC_000913/2977056‑2977305 | aCCGTTGTATTGCTCTGGACGATCGTTACGGTGCCTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTAc < 2:2379/139‑1 (MQ=255) gTTGTATTGCTCTGGACGATCGTTACGGTGCCTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGAt < 1:746053/139‑1 (MQ=255) gTATTGCTCTGGACGATCGTTACGGTGCCTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGcc < 2:307468/139‑1 (MQ=255) gACGATCGTTACGGTGCCTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGcc > 2:634425/1‑128 (MQ=255) gACGATCGTTACGGTGCCTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGcc < 1:634425/128‑1 (MQ=255) ttACGGTGCCTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTg < 1:275415/139‑1 (MQ=255) tACGGTGCCTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGc < 2:708548/139‑1 (MQ=255) ccTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAAt > 1:50140/1‑139 (MQ=255) ctggctggCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATg > 2:467541/1‑139 (MQ=255) ctggctggCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATg > 2:409048/1‑139 (MQ=255) ggctggcAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGa > 1:476297/1‑117 (MQ=255) ggctggcAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGa < 2:476297/117‑1 (MQ=255) ggctggcAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGAc < 2:50140/139‑1 (MQ=255) ggcAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGc < 1:493276/139‑1 (MQ=255) gcAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTg < 2:357108/123‑1 (MQ=255) gcAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTg > 1:357108/1‑123 (MQ=255) cgTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGAc > 2:252456/1‑139 (MQ=255) ggTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAg > 2:52601/1‑91 (MQ=255) ggTCATACCCGCATTGGTTATCTGTGCTCTAACCACGCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAg < 1:52601/91‑1 (MQ=255) tCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGc < 1:504986/112‑1 (MQ=255) tCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGc > 2:504986/1‑112 (MQ=255) aCCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAgcgg < 2:476859/139‑1 (MQ=255) ctctAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGc < 1:225907/88‑1 (MQ=255) ctctAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGc > 2:225907/1‑88 (MQ=255) ctctAACCACTCTATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCAATGACCg > 1:129872/1‑139 (MQ=255) tctATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCGATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCAATGACCGAGCTATTggg > 1:486961/1‑139 (MQ=255) tctATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGc > 2:387710/1‑78 (MQ=255) tctATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGc < 1:387710/78‑1 (MQ=255) tctATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCAATGACCGAGCTTTTggg > 2:194620/1‑139 (MQ=255) tctATTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCAATGACCGAGCTTTTggg > 1:690383/1‑139 (MQ=255) aTTTCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGCCGAAAGCGGCGGCGAACAGGCAATGACCGAGCTTTTGGGACg > 1:699453/1‑139 (MQ=255) ttCTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCAATGACCGAGCTTTTGGGACGAg > 1:394707/1‑139 (MQ=255) cTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTg < 2:368345/56‑1 (MQ=255) cTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTg > 1:368345/1‑56 (MQ=255) cTGACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCAATGACCGAGCTTTTGGGACGAGga < 1:373202/139‑1 (MQ=255) gACGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCAATGACCGAGCTTTTGGGACGAGgaag > 2:162129/1‑139 (MQ=255) aCGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCaa > 2:239166/1‑113 (MQ=255) aCGCCGAAGATCGTC‑GCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCaa < 1:239166/113‑1 (MQ=255) | ACCGTTGTATTGCTCTGGACGATCGTTACGGTGCCTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTCTGCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCAATGACCGAGCTTTTGGGACGAGGAAG > NC_000913/2977056‑2977305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |