| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,968,260 | (T)6→5 | coding (175/2247 nt) | ptsP ← | PEP‑protein phosphotransferase enzyme I, GAF domain containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,968,255 | 0 | T | . | 100.0% | 116.2 / NA | 27 | coding (180/2247 nt) | ptsP | PEP‑protein phosphotransferase enzyme I, GAF domain containing protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (12/15); total (12/15) | |||||||||||
CGGAGGGGATGTATTTGAAGCTGGGGTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGGTTTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGAACAGACCTCGGTATCCATCGCAAGACAGATGTCGGTAACCAGAATATTTAACGCCTCATTCAGGCGTGG > NC_000913/2968131‑2968389 | cGGAGGGGATGTATTTGAAGCTGGGGTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCgg > 2:379588/1‑139 (MQ=255) gAGGGGATGTATTTGAAGCTGGGGTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGt > 1:158808/1‑139 (MQ=255) gAGGGGATGTATTTGAAGCTGGGGTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGt < 1:63573/139‑1 (MQ=255) ggggATGTATTTGAAGCTGGGGTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCg < 1:100336/139‑1 (MQ=255) gggATGTATTTGAAGCTGGGGTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGc < 1:383178/139‑1 (MQ=255) aTGTATTTGAAGCTGGGGTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCAt < 1:369332/139‑1 (MQ=255) aTGTATTTGAAGCTGGGGGGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCCGCCTGCCAACCAGGCCGACGATCCCTTCTTCATACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCACCCGGGTCGCCAt < 1:119782/139‑1 (MQ=255) tGGGGTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTaacaa > 2:178639/1‑139 (MQ=255) gggTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCAt > 1:246978/1‑124 (MQ=255) gggTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCAt < 2:246978/124‑1 (MQ=255) gggTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACg > 1:172398/1‑139 (MQ=255) gggTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACg < 1:33062/139‑1 (MQ=255) tGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATg < 2:500716/139‑1 (MQ=255) tATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCg > 1:134461/1‑139 (MQ=255) tCCGCCAGGCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGAACAGAc < 1:312282/139‑1 (MQ=255) ccAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGAACAGACCTCGGTATCCAt < 1:52753/139‑1 (MQ=255) ccTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGAACAGACCTCGGTATCCATCGCAAGACAGATGTCGGt > 1:397104/1‑139 (MQ=255) atcaAACGCGAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGAACAGACCTCGGTATCCATCGCAAGACAGATGTCGGTAACCa < 2:264253/139‑1 (MQ=255) gcgAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGAACAGACCTCGGTATCCATCGCAAGACAGATGTCGGTAACCAGAATAtt > 1:429023/1‑139 (MQ=255) cgAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGt > 2:223165/1‑42 (MQ=255) cgAGCGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGt < 1:223165/42‑1 (MQ=255) cGTTACAGTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGAACAGACCTCGGTATCCATCGCAAGACAGATGTCGGTAACCAGAATATTTAACg < 2:352168/139‑1 (MQ=255) gTGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGAACAGACCTCGGTATCCATCGCAAGACAGATGTCGGTAACCAGAATATTTAACGCCTCAtt < 2:158808/139‑1 (MQ=255) tGCGACCGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGAACAGACCTCGGTATCCATCGCAAGACAGATGTCGGTAACCAGAATATTTAACGCCTCATTc > 1:418988/1‑139 (MQ=255) ccGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGa > 1:276465/1‑73 (MQ=255) ccGCGTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGa < 2:276465/73‑1 (MQ=255) cgTGG‑TTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGAACAGACCTCGGTATCCATCGCAAGACAGATGTCGGTAACCAGAATATTTAACGCCTCATTCAGGCgtgg > 1:468969/1‑139 (MQ=255) | CGGAGGGGATGTATTTGAAGCTGGGGTGCTTTTGCGCATCTGCAAGGTTTATCGGTTCCGCCAGCCTGCCAACCAGGCCGACGATCCCTTCATCAAACGCGAGCGTTACAGTGCGACCGCGTGGTTTTTTCAGCCCCCGGGTCGCCATCAGGTAGTAACAACGTCGATCATGATCGGCCAGGTAGACCGAACAGACCTCGGTATCCATCGCAAGACAGATGTCGGTAACCAGAATATTTAACGCCTCATTCAGGCGTGG > NC_000913/2968131‑2968389 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |