Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,635,400	(T)7→6	intergenic (‑90/‑121)	rob ← / → creA	right oriC‑binding transcriptional activator, AraC family/putative periplasmic protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,635,394	0	T	.	100.0%	290.3 / NA	69	intergenic (‑84/‑127)	rob/creA	right oriC‑binding transcriptional activator, AraC family/putative periplasmic protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (29/40);  total (29/40)

AGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATA  >  NC_000913/4635258‑4635528                                                                                                                                         |                                                                                                                                       aGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGttt                                                                                                                                      <  1:183408/139‑1 (MQ=255)  gATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGtttt                                                                                                                                     >  1:431698/1‑139 (MQ=255)   aTGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGttttt                                                                                                                                    <  2:634736/139‑1 (MQ=255)   aTGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGttttt                                                                                                                                    >  2:1120450/1‑139 (MQ=255)      aCCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGttttttct                                                                                                                                 <  2:1090102/139‑3 (MQ=255)      aCCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGttttttct                                                                                                                                 <  2:431698/139‑3 (MQ=255)       ccTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCATCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGttttttctt                                                                                                                                >  2:369551/1‑136 (MQ=255)        cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGttttttctta                                                                                                                               >  1:968049/1‑135 (MQ=255)        cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGttttttctta                                                                                                                               >  2:783982/1‑135 (MQ=255)        cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGttttttctta                                                                                                                               >  2:581716/1‑135 (MQ=255)        cTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGttttttctta                                                                                                                               >  2:126849/1‑135 (MQ=255)         ttCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTtag                                                                                                                             <  1:1120450/139‑1 (MQ=255)          tCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTtagt                                                                                                                            >  1:144980/1‑139 (MQ=255)          tCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTtagt                                                                                                                            >  1:895007/1‑139 (MQ=255)             agccagATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTaga                                                                                                                         <  2:144980/139‑1 (MQ=255)               ccagATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGt                                                                                                                       <  1:14903/139‑1 (MQ=255)               ccagATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGt                                                                                                                       <  2:61604/139‑1 (MQ=255)               ccagATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGt                                                                                                                       <  2:37237/139‑1 (MQ=255)                cagATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTa                                                                                                                      <  1:767510/139‑1 (MQ=255)                cagATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTa                                                                                                                      <  1:581716/139‑1 (MQ=255)                             cgcgAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCtt                                                                                                         >  1:1041267/1‑139 (MQ=255)                                   taatGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGa                                                                                                   <  2:187250/139‑1 (MQ=255)                                   taatGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGa                                                                                                   <  1:118599/139‑1 (MQ=255)                                            ccTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGt                                                                                          >  2:349336/1‑139 (MQ=255)                                                 tCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTga                                                                                     >  1:1008521/1‑139 (MQ=255)                                                     tAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGAtt                                                                                 >  2:90940/1‑139 (MQ=255)                                                     tAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGAtt                                                                                 <  1:774827/139‑1 (MQ=255)                                                      aaaaTATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGAttt                                                                                <  2:968049/139‑1 (MQ=255)                                                           atCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTc                                                                           <  1:285806/139‑1 (MQ=255)                                                             ccTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACCGAAATAAAAGTATTGAGATTTTGTTCtt                                                                         >  1:674155/1‑139 (MQ=255)                                                             ccTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTAGACGGAAATAAAAGTATTGAGATTTTGTTCtt                                                                         <  2:546683/139‑1 (MQ=255)                                                                cATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGAttt                                                                                >  1:397580/1‑129 (MQ=255)                                                                cATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGAttt                                                                                <  2:397580/129‑1 (MQ=255)                                                                cATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAAt                                                                      <  2:46025/139‑1 (MQ=255)                                                                  tCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAAGAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAAtga                                                                    <  2:674155/139‑3 (MQ=255)                                                                    cTTTCAACAACGTGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAat                                                                  <  2:365772/139‑1 (MQ=255)                                                                    cTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAat                                                                  <  2:895007/139‑1 (MQ=255)                                                                    cTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAat                                                                  <  1:349336/139‑1 (MQ=255)                                                                    cTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAat                                                                  <  1:476997/139‑1 (MQ=255)                                                                       tCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTtag                                                                                                                             <  1:625479/77‑1 (MQ=255)                                                                       tCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTtag                                                                                                                             >  2:625479/1‑77 (MQ=255)                                                                           caacGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTAt                                                           >  2:709300/1‑139 (MQ=255)                                                                             acGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAat                                                                  <  1:807683/130‑1 (MQ=255)                                                                             acGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAat                                                                  >  2:807683/1‑130 (MQ=255)                                                                             acGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTAttt                                                         >  2:279453/1‑139 (MQ=255)                                                                                aGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGt                                                                                                                       <  2:685708/74‑1 (MQ=255)                                                                                aGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGt                                                                                                                       >  1:685708/1‑74 (MQ=255)                                                                                aGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACg                                                                                                     >  2:260840/1‑92 (MQ=255)                                                                                aGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACg                                                                                                     <  1:260840/92‑1 (MQ=255)                                                                                aGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTAcc                                                      >  1:236325/1‑139 (MQ=255)                                                                                    ccTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGa                                                  <  1:90940/139‑1 (MQ=255)                                                                                     cTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGAc                                                 <  1:253479/139‑1 (MQ=255)                                                                                      tGACATCAGGTAATTTGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACg                                                <  1:369551/139‑1 (MQ=255)                                                                                      tGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACg                                                <  2:236325/139‑1 (MQ=255)                                                                                              ggTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAAtt                                        >  2:465698/1‑139 (MQ=255)                                                                                               gTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAAt                                                                      >  1:687045/1‑108 (MQ=255)                                                                                               gTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAAt                                                                      <  2:687045/108‑1 (MQ=255)                                                                                               gTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTg                                       >  1:13053/1‑139 (MQ=255)                                                                                                tAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGc                                      <  2:89221/139‑1 (MQ=255)                                                                                                  aTTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTc                                    >  2:132765/1‑139 (MQ=255)                                                                                                   ttGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCg                                   >  2:4835/1‑139 (MQ=255)                                                                                                    tGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGAGACGAACTAATTGCTCgt                                  >  1:755999/1‑139 (MQ=255)                                                                                                       ataataGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTa                               <  1:279453/139‑1 (MQ=255)                                                                                                         aataGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAAt                             >  1:1040736/1‑139 (MQ=255)                                                                                                           taGCATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAg                           >  1:773145/1‑139 (MQ=255)                                                                                                              cATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATa                        >  1:731221/1‑139 (MQ=255)                                                                                                              cATTTTTTGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATa                        <  1:430331/139‑1 (MQ=255)                                                                                                                ttttttGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTa                               >  1:810723/1‑130 (MQ=255)                                                                                                                ttttttGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTa                               <  2:632116/130‑1 (MQ=255)                                                                                                                ttttttGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTa                               >  1:632116/1‑130 (MQ=255)                                                                                                                ttttttGCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTa                               <  2:810723/130‑1 (MQ=255)                                                                                                                      gCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGt                <  1:513349/139‑1 (MQ=255)                                                                                                                      gCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGt                <  1:140416/139‑1 (MQ=255)                                                                                                                      gCTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGt                <  1:465698/139‑1 (MQ=255)                                                                                                                       cTGTTTTAGCATTCAGTG‑TTTTTTCTTAGTGGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTa               >  1:568884/1‑139 (MQ=255)                                                                                                                             tAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAata         <  2:1008521/139‑1 (MQ=255)                                                                                                                             tAGCATTCAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAata         <  2:1041267/139‑1 (MQ=255)                                                                                                                                    cAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGTGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGGGTAATAGTTAAAAATGGTAACAATATGAAATa  >  2:612743/1‑139 (MQ=255)                                                                                                                                    cAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAat                                                                  <  1:432116/75‑1 (MQ=255)                                                                                                                                    cAGTG‑TTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAat                                                                  >  2:432116/1‑75 (MQ=255)                                                                                                                                         |                                                                                                                                       AGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATAAAATATCCTCATCCTTTCAACAACGAGCACCTGACATCAGGTAATTGGATAATAGCATTTTTTGCTGTTTTAGCATTCAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATA  >  NC_000913/4635258‑4635528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑