| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,865,112 | Δ1 bp | coding (1162/1662 nt) | yidE ← | putative transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,865,110 | 0 | G | . | 100.0% | 70.7 / NA | 17 | coding (1164/1662 nt) | yidE | putative transporter |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (9/8); total (9/8) | |||||||||||
CGAGGTTGGCGCTTGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACGGGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCATCAATTGCGGACGGACGCCCCAC > NC_000913/3864977‑3865238 | cgAGGTTGGCGCTTGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACggaata < 2:471112/139‑5 (MQ=255) tGGCGCTTGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCt < 1:120636/139‑1 (MQ=255) cTTGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACaa < 2:305127/139‑1 (MQ=255) ccAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGa < 2:420876/139‑1 (MQ=255) cAGCTAGCCTATACTGCCGATACGCCCTAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTGTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCaa < 1:45265/139‑1 (MQ=255) acGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGgc < 1:283104/129‑1 (MQ=255) acGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGgc > 2:283104/1‑129 (MQ=255) ccGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTg > 2:163190/1‑139 (MQ=255) aCGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATa > 2:342643/1‑106 (MQ=255) aCGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATa < 1:342643/106‑1 (MQ=255) aCGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGtttt > 2:435111/1‑139 (MQ=255) cATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACggaata > 1:35011/1‑65 (MQ=255) cATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACggaata < 2:35011/69‑5 (MQ=255) tAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAGTCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATCCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGGTTTtgctac > 1:9395/1‑137 (MQ=255) gCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTc > 1:275645/1‑139 (MQ=255) tCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCa > 2:141429/1‑139 (MQ=255) cgcccgccAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGc > 2:206256/1‑139 (MQ=255) ccAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACg > 1:45068/1‑139 (MQ=255) aaTCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCATCAATTGCGgacggacg < 2:45068/139‑1 (MQ=255) ggCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCATCAATTGCGGACGGACGCCccac < 1:435111/139‑1 (MQ=255) | CGAGGTTGGCGCTTGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACGGGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCATCAATTGCGGACGGACGCCCCAC > NC_000913/3864977‑3865238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |