| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,865,112 | Δ1 bp | coding (1162/1662 nt) | yidE ← | putative transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,865,110 | 0 | G | . | 100.0% | 136.4 / NA | 34 | coding (1164/1662 nt) | yidE | putative transporter |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (11/23); total (11/23) | |||||||||||
GCGAGGTTGGCGCTTGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACGGGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCATCAATTGCGGACGGACGCCCCACCAGATT > NC_000913/3864976‑3865244 | gcgAGGTTGGCGCTTGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCCGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACggaat > 1:504344/1‑136 (MQ=255) cgAGGTTGGCGCTTGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCTGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACggaata > 1:198613/1‑135 (MQ=255) cgAGGTTGGCGCTTGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACggaata > 2:1092840/1‑135 (MQ=255) tGGCGCTTGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCt < 1:341466/139‑1 (MQ=255) ggCGCTTGGCGGCATAAACCAGTACAGCGTGCCGCTACTGCCGATACGCTCGAGGATCAACTCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGCATCCTGGCACAAAGAC‑GGAATAGAACCTa > 1:761555/1‑139 (MQ=255) ttGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAAt < 2:1157770/139‑1 (MQ=255) ccAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGa < 2:223398/139‑1 (MQ=255) cAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCaa < 2:291697/139‑1 (MQ=255) cgatactgccgatacGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACggaa < 1:1080114/98‑3 (MQ=255) cgatactgccgatacGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACggaa > 2:1080114/1‑96 (MQ=255) actgccgatacGCCCGAGGATCAACTCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGGCTAGCCCGATGCCAATAAACACTGgca < 2:761555/139‑1 (MQ=255) acGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCt < 2:836030/105‑1 (MQ=255) acGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGaa > 2:278876/1‑139 (MQ=255) acGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCACAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCt > 1:836030/1‑105 (MQ=255) aaCGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGttt < 2:852646/139‑1 (MQ=255) aCGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACaa > 2:390304/1‑84 (MQ=255) aCGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACaa < 1:390304/84‑1 (MQ=255) aaTCAGCGGTCCGCCTGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTgcg < 2:198613/139‑1 (MQ=255) aaTCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTgcg < 1:18601/139‑1 (MQ=255) tCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCa < 1:278876/139‑1 (MQ=255) tCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCa < 1:1092840/139‑1 (MQ=255) gCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTc > 2:137795/1‑139 (MQ=255) ggTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTccc < 2:1141816/139‑1 (MQ=255) gTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTcccc < 1:102022/139‑1 (MQ=255) tCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATg > 1:803751/1‑84 (MQ=255) tCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATg < 2:803751/84‑1 (MQ=255) cgcccgcgAGCCCCAGTTTCAACGCGGCCGGGAATCCTGCCACAAAGAC‑GGAATAGAACCTAACATTACGCCTAGCCCGa < 2:717317/80‑1 (MQ=255) cgcccgccAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGa > 1:717317/1‑80 (MQ=255) cgcccgccAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAg > 1:456698/1‑138 (MQ=255) cgcccgccAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAg < 2:456698/138‑1 (MQ=255) gCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCa < 1:1038582/139‑1 (MQ=255) tttCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCAt < 2:306485/139‑1 (MQ=255) tttCAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCAt > 1:886292/1‑139 (MQ=255) cAACGCGGCCGGGAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCATCaa > 2:579322/1‑139 (MQ=255) ggAATCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCAGCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCTTCAATTGcggacgga < 1:788796/139‑1 (MQ=255) aaTCCTGGCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCATCAATTGCGgacggacg < 1:579322/139‑1 (MQ=255) tagCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCATCAATTGCGGACGGACGCCcca < 2:504344/137‑1 (MQ=255) ggCACAAAGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGTCATCAATTGCGGACGGACGCCccac < 2:886292/139‑1 (MQ=255) aaGAC‑GGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCATCAATTGCGGACGGACGCCCCACCAGAtt > 2:617147/1‑139 (MQ=255) | GCGAGGTTGGCGCTTGGCGGCATAAACCAGTACAGCTTGCCGATACTGCCGATACGCCCGAGGATCAACGCCATAATCAGCGGTCCGCCCGCCAGCCCCAGTTTCAACGCGGCCGGGAATCCTGGCACAAAGACGGGAATAGAACCTAACAATACGCCTAGCCCGATGCCAATAAACACTGGCAGCATCTGAACCTGTTGCAGTTTTTGCTGCGCATTCCCCAGCACATTGGCAACGGCATCAATTGCGGACGGACGCCCCACCAGATT > NC_000913/3864976‑3865244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |