Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,988,106 (C)6→7 intergenic (‑147/‑116) azuC ← / → yecR acid‑inducible small membrane‑associated protein/lipoprotein, function unknown

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,988,1001.C97.1% 253.6 / ‑0.5 70intergenic (‑141/‑122)azuC/yecRacid‑inducible small membrane‑associated protein/lipoprotein, function unknown
Reads supporting (aligned to +/- strand):  ref base . (2/0);  new base C (35/33);  total (37/33)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

ATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTCTGGCTGGACCATGA  >  NC_000913/1987982‑1988225
                                                                                                                       |                                                                                                                              
ataCAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAGAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACAcc                                                                                                            >  1:847457/1‑139 (MQ=255)
      gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa                                                                                                      >  1:703866/1‑139 (MQ=255)
      gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa                                                                                                      >  2:967149/1‑139 (MQ=255)
      gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa                                                                                                      >  1:821942/1‑139 (MQ=255)
      gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa                                                                                                      <  2:821942/139‑1 (MQ=255)
      gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑cc                                                                                                                              >  2:1114143/1‑115 (MQ=255)
      gtgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑cc                                                                                                                              <  1:1114143/115‑1 (MQ=255)
                 tttGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAAt                                                                                           >  1:444774/1‑139 (MQ=255)
                   tGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGATATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAg                                                                                         >  2:787588/1‑139 (MQ=255)
                         tataATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑cccc‑cccta                                                                                                                      <  1:1149627/103‑4 (MQ=255)
                         tataATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑cccc‑cccta                                                                                                                      >  2:1149627/1‑100 (MQ=255)
                                 gACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGt                                                                           <  2:834409/139‑1 (MQ=255)
                                  aCAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTc                                                                          >  1:429251/1‑139 (MQ=255)
                                  aCAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTc                                                                          >  1:211899/1‑139 (MQ=255)
                                      ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGa                                                                                                                >  1:225242/1‑97 (MQ=255)
                                      ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGa                                                                                                                <  2:225242/97‑1 (MQ=255)
                                      ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGt                                                                           >  1:975724/1‑134 (MQ=255)
                                      ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGt                                                                           <  2:975724/134‑1 (MQ=255)
                                      ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCtttt                                                                      <  2:703866/139‑1 (MQ=255)
                                      ccATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCtttt                                                                      >  2:693066/1‑139 (MQ=255)
                                        aTCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAg                                                                               <  2:361332/128‑1 (MQ=255)
                                        aTCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCCACCTCTTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAg                                                                               >  1:361332/1‑128 (MQ=255)
                                         tCACAAGAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCg                                                                   <  2:847457/139‑1 (MQ=255)
                                         tCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa                                                                                                      <  1:1038044/104‑1 (MQ=255)
                                         tCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGa                                                                                                      >  2:1038044/1‑104 (MQ=255)
                                          cacaAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑ccc                                                                                                                             <  2:276082/80‑1 (MQ=255)
                                          cacaAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑ccc                                                                                                                             >  1:276082/1‑80 (MQ=255)
                                           acaAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGc                                                                 >  2:193212/1‑139 (MQ=255)
                                              aaaaTCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt                                                              <  1:193212/139‑1 (MQ=255)
                                              aaaaTCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt                                                              <  1:967149/139‑1 (MQ=255)
                                                     atcTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt                                                              >  1:241549/1‑132 (MQ=255)
                                                     atcTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt                                                              <  2:241549/132‑1 (MQ=255)
                                                           aTGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGt                                                >  2:107550/1‑139 (MQ=255)
                                                             gtgATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTa                                               <  2:429251/139‑1 (MQ=255)
                                                               gATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAAc                                             <  2:444774/139‑1 (MQ=255)
                                                                aTACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCa                                                                                >  2:468543/1‑103 (MQ=255)
                                                                aTACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCa                                                                                <  1:468543/103‑1 (MQ=255)
                                                                      aTCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTaaa                                      >  1:350490/1‑139 (MQ=255)
                                                                           aTAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCg                                                         >  2:747779/1‑115 (MQ=255)
                                                                           aTAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCg                                                         <  1:747779/115‑1 (MQ=255)
                                                                           aTAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGt                                 >  2:818487/1‑139 (MQ=255)
                                                                                 aCCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt                                                              >  2:998653/1‑104 (MQ=255)
                                                                                 aCCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCAt                                                              <  1:998653/104‑1 (MQ=255)
                                                                                     ttttAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGAGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCtt                       >  2:723222/2‑139 (MQ=255)
                                                                                     cTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt                              >  1:638122/1‑132 (MQ=255)
                                                                                     cTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt                              <  2:638122/132‑1 (MQ=255)
                                                                                     cTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCtt                       >  2:820490/1‑139 (MQ=255)
                                                                                        tAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCt                                                                                                                  >  1:1035425/1‑45 (MQ=255)
                                                                                        tAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCt                                                                                                                  <  2:1035425/45‑1 (MQ=255)
                                                                                        tAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTa                                               >  2:555563/1‑112 (MQ=255)
                                                                                        tAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTa                                               <  1:555563/112‑1 (MQ=255)
                                                                                        tAATGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTAct                    >  1:935782/1‑139 (MQ=255)
                                                                                           tGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAACTAGTGCTTTCTCTTACtctt                 <  1:693066/139‑1 (MQ=255)
                                                                                           tGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACtctt                 <  2:211899/139‑1 (MQ=255)
                                                                                           tGTTATAAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACtctt                 <  1:818487/139‑1 (MQ=255)
                                                                                               ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt                              >  2:729/1‑122 (MQ=255)
                                                                                               ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt                              <  1:729/122‑1 (MQ=255)
                                                                                               ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACtctt                 >  2:901361/1‑135 (MQ=255)
                                                                                               ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACtctt                 <  1:901361/135‑1 (MQ=255)
                                                                                               ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTctgg             >  2:511372/1‑139 (MQ=255)
                                                                                               ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCG‑CTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTa                                               <  2:31761/104‑1 (MQ=255)
                                                                                               ataAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCG‑CTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTa                                               >  1:31761/1‑104 (MQ=255)
                                                                                                taAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTa                      >  1:137901/1‑129 (MQ=255)
                                                                                                taAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTa                      <  2:137901/129‑1 (MQ=255)
                                                                                                taAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTctggc            >  2:243208/1‑139 (MQ=255)
                                                                                                taAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTctggc            <  1:820490/139‑1 (MQ=255)
                                                                                                taAAAATGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTctggc            >  1:901352/1‑139 (MQ=255)
                                                                                                  aaaaTGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCTAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTGTTACTCTTctggctg          <  1:787588/139‑1 (MQ=255)
                                                                                                  aaaaTGATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTctggctg          <  1:511372/139‑1 (MQ=255)
                                                                                                       gATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCg                                                         >  2:148157/1‑87 (MQ=255)
                                                                                                       gATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCg                                                         <  1:148157/87‑1 (MQ=255)
                                                                                                       gATAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTCTGGCTGGACCa     <  2:350490/139‑1 (MQ=255)
                                                                                                        aTAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt                              >  2:180104/1‑113 (MQ=255)
                                                                                                        aTAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCt                              <  1:180104/113‑1 (MQ=255)
                                                                                                        aTAATCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTCTGGCTGGACCAt    >  1:897454/1‑139 (MQ=255)
                                                                                                          aaTCAAAAAACAGCCCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTCTGGCTGGACCATga  <  1:243208/139‑1 (MQ=255)
                                                                                                                       |                                                                                                                              
ATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAG‑CCCC‑CCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCTCTTACTCTTCTGGCTGGACCATGA  >  NC_000913/1987982‑1988225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑