Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,867,575	(T)8→7	intergenic (‑153/‑153)	ibpA ← / → yidQ	heat shock chaperone/DUF1375 family outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,867,568	0	T	.	100.0%	345.4 / NA	80	intergenic (‑146/‑160)	ibpA/yidQ	heat shock chaperone/DUF1375 family outer membrane protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (35/45);  total (35/45)

TCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAA  >  NC_000913/3867433‑3867700                                                                                                                                        |                                                                                                                                     tCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACtttt                                                                                                                                   >  1:1081252/1‑139 (MQ=255)   cTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACtttttt                                                                                                                                 >  1:605772/1‑139 (MQ=255)   cTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACtttttt                                                                                                                                 >  1:502561/1‑139 (MQ=255)   cTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACtttttt                                                                                                                                 >  2:450813/1‑139 (MQ=255)     gAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACtttttttg                                                                                                                               >  2:960839/1‑138 (MQ=255)       aaTCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACtttttttgca                                                                                                                             <  1:752157/139‑4 (MQ=255)           aGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGttt                                                                                                                        >  2:65749/1‑139 (MQ=255)           aGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCCCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAGCTTTTCAAGCCTTATCAGCGGTC‑TTTGTTTGCAGttt                                                                                                                        <  1:743170/139‑1 (MQ=255)             cGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTAt                                                                                                                      <  1:219666/139‑1 (MQ=255)              gagaATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATg                                                                                                                     <  1:213737/139‑1 (MQ=255)              gagaATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATg                                                                                                                     <  2:820607/139‑1 (MQ=255)              gagaATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCACCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATg                                                                                                                     <  1:1046591/139‑1 (MQ=255)                gaATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGt                                                                                                                   <  2:1081252/139‑1 (MQ=255)                  aTGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCt                                                                                                                 <  1:142358/139‑1 (MQ=255)                  aTGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCt                                                                                                                 <  2:595511/139‑1 (MQ=255)                  aTGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCt                                                                                                                 <  2:583300/139‑1 (MQ=255)                  aTGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCt                                                                                                                 <  2:816727/139‑1 (MQ=255)                  aTGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAAAACACCCAACAGGCACGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTcc                                                                                                                 <  2:1074336/139‑2 (MQ=255)                   tGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTa                                                                                                                <  1:415197/139‑1 (MQ=255)                    gTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTAt                                                                                                               <  1:1025629/139‑1 (MQ=255)                         aCCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCAt                                                                                                          <  1:1051932/139‑1 (MQ=255)                           cTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGttt                                                                                                                        <  1:839133/123‑1 (MQ=255)                           cTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGttt                                                                                                                        >  2:839133/1‑123 (MQ=255)                           cTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAg                                                                                                        >  1:1011240/1‑139 (MQ=255)                           cTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGGTTATGGTCTATTGCATAg                                                                                                        >  1:326710/1‑139 (MQ=255)                            ttCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGa                                                                                                       >  1:192381/1‑139 (MQ=255)                             tCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGAc                                                                                                      >  1:882779/1‑139 (MQ=255)                             tCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGAc                                                                                                      >  1:199831/1‑139 (MQ=255)                             tCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGATAAGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATTGAc                                                                                                      >  2:352270/1‑139 (MQ=255)                              ccACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACt                                                                                                     >  1:919006/1‑139 (MQ=255)                                          ggtcaggtAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGt                                                                                                                          <  2:265312/106‑1 (MQ=255)                                          ggtcaggtAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGt                                                                                                                          >  1:265312/1‑106 (MQ=255)                                          ggtcaggtAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGgcagca                                                                                         >  1:595148/1‑139 (MQ=255)                                           gtcaggtAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCAc                                                                                        >  1:49735/1‑139 (MQ=255)                                            tcaggtAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCCTAGACTGAGGGGGCAGCACg                                                                                       <  1:654030/139‑1 (MQ=255)                                              aggtAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGaa                                                                                     >  2:771573/1‑139 (MQ=255)                                              aggtAGCCAGAACACCCATATGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGACTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGAGCCGCACGaa                                                                                     <  1:727001/139‑1 (MQ=255)                                                     cAGAACACCCATCAGGCGCGTCCTCATCAGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTaa                                                                              >  2:688313/1‑139 (MQ=255)                                                        aaCACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGAc                                                                                                      >  2:19906/1‑112 (MQ=255)                                                        aaCACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGAc                                                                                                      <  1:19906/112‑1 (MQ=255)                                                             ccATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGt                                                                                                                   >  1:474755/1‑94 (MQ=255)                                                             ccATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGt                                                                                                                   <  2:474755/94‑1 (MQ=255)                                                             ccATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGAt                                                                      <  2:617016/139‑1 (MQ=255)                                                             ccATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGAt                                                                      >  2:877321/1‑139 (MQ=255)                                                              cATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATa                                                                     >  1:68910/1‑139 (MQ=255)                                                                    gcgcGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTa                                                                                                                       >  1:200731/1‑83 (MQ=255)                                                                    gcgcGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTa                                                                                                                       <  2:200731/83‑1 (MQ=255)                                                                    gcgcGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAgccgcc                                                               >  2:213954/1‑139 (MQ=255)                                                                         tCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGt                                                                                                                   <  2:603359/82‑1 (MQ=255)                                                                         tCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGt                                                                                                                   >  1:603359/1‑82 (MQ=255)                                                                          ccTCATCGGCTACGATGTAAAAATTGGTCTGGAAATGAACTTTTCAAGCGTTATCAGCGGAC‑TTCCTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTg                                                         <  1:1070229/139‑1 (MQ=255)                                                                          ccTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTg                                                         <  2:112682/139‑1 (MQ=255)                                                                          ccTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTg                                                         <  2:192381/139‑1 (MQ=255)                                                                            tCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCg                                                       <  2:593635/139‑1 (MQ=255)                                                                              aTCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTg                                                         <  2:997390/135‑1 (MQ=255)                                                                              aTCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTg                                                         >  1:997390/1‑135 (MQ=255)                                                                              aTCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGAc                                                     >  2:758578/1‑139 (MQ=255)                                                                               tCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACg                                                    <  2:515202/139‑1 (MQ=255)                                                                                    tACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAatg                                               >  1:500078/1‑139 (MQ=255)                                                                                          gTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAatgatgatg                                         <  2:883221/139‑1 (MQ=255)                                                                                          gTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAatgatgatg                                         <  1:460912/139‑1 (MQ=255)                                                                                                   ggTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCa                                                                                                           <  1:398377/64‑1 (MQ=255)                                                                                                   ggTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCa                                                                                                           >  2:398377/1‑64 (MQ=255)                                                                                                   ggTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAatgatg                                            <  2:719409/127‑1 (MQ=255)                                                                                                   ggTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAatgatg                                            >  1:719409/1‑127 (MQ=255)                                                                                                     tCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGttt                                                                                                                        >  2:806328/1‑49 (MQ=255)                                                                                                     tCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGttt                                                                                                                        <  1:806328/49‑1 (MQ=255)                                                                                                     tCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGc                              >  1:908722/1‑139 (MQ=255)                                                                                                     tCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGc                              <  2:502561/139‑1 (MQ=255)                                                                                                     tCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGc                              >  1:793691/1‑139 (MQ=255)                                                                                                          aaaTGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAggg                         <  2:1005963/139‑1 (MQ=255)                                                                                                          aaaTGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAggg                         <  2:595148/139‑1 (MQ=255)                                                                                                             tGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATc                      >  2:910118/1‑139 (MQ=255)                                                                                                               aaCTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGc                    <  1:771573/139‑1 (MQ=255)                                                                                                                   tttCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGAt                       <  1:249542/132‑1 (MQ=255)                                                                                                                   tttCAAGCCTTATCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGAt                       >  2:249542/1‑132 (MQ=255)                                                                                                                              aTCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAggg                         >  1:812478/1‑119 (MQ=255)                                                                                                                              aTCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAggg                         <  2:812478/119‑1 (MQ=255)                                                                                                                              aTCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGAt                       <  1:758739/121‑1 (MQ=255)                                                                                                                              aTCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGAt                       >  2:758739/1‑121 (MQ=255)                                                                                                                              aTCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGc     >  1:1094413/1‑139 (MQ=255)                                                                                                                              aTCAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGc     >  1:1036393/1‑139 (MQ=255)                                                                                                                                cAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCa   <  2:373826/139‑1 (MQ=255)                                                                                                                                cAGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCa   <  1:213954/139‑1 (MQ=255)                                                                                                                                 aGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCaa  <  1:65749/139‑1 (MQ=255)                                                                                                                                 aGCGGAC‑TTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCaa  <  1:910118/139‑1 (MQ=255)                                                                                                                                        |                                                                                                                                     TCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAA  >  NC_000913/3867433‑3867700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑