New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	46 (0.740)	13 (0.240)	11/182	2.7	22.0%	coding (305/630 nt)	stfP	e14 prophage, uncharacterized protein
	?	NC_000913	= 1209602	53 (1.000)					pseudogene (18/501 nt)	stfE	pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

CAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAC  >  NC_000913/1209467‑1209739                                                                                                                                         |                                                                                                                                          cAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGcct                                                                                                                                        >  2:1102623‑M2/1‑136 (MQ=255)          tGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcccaaa                                                                                                                               <  2:61413‑M2/139‑13 (MQ=255)              ggATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcccaaaccaa                                                                                                                           <  2:517486‑M2/139‑17 (MQ=255)                  aaGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGAAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGtt                                                                                                                       >  2:246503/1‑139 (MQ=255)                         tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGcct                                                                                                                                        <  1:1050573‑M2/115‑4 (MQ=255)                         tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGcct                                                                                                                                        >  2:1050573‑M2/1‑112 (MQ=255)                         tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGaaa                                                                                                                >  1:647864/1‑139 (MQ=255)                               ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcc                                                                                                                                   <  2:872656‑M2/114‑9 (MQ=255)                               ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcc                                                                                                                                   >  1:872656‑M2/1‑106 (MQ=255)                               ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaag                                                                                                          <  2:1477186/139‑1 (MQ=255)                               ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaag                                                                                                          >  2:1128061/1‑139 (MQ=255)                                         tcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAg                                                                                                >  1:441836/1‑139 (MQ=255)                                             cagcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaaa                                                                                            <  2:891984/139‑1 (MQ=255)                                                 agAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGc                                                                                        <  2:647864/139‑1 (MQ=255)                                                   aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgattt                                                                                      <  1:1253947‑M2/139‑54 (MQ=255)                                                   aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgattt                                                                                      <  2:1239603‑M2/139‑54 (MQ=255)                                                   aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGcct                                                                                                                                        >  2:589729‑M2/1‑86 (MQ=255)                                                   aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGcct                                                                                                                                        <  1:589729‑M2/89‑4 (MQ=255)                                                   aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACa                                                                                                  <  2:1258825/127‑1 (MQ=255)                                                   aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACa                                                                                                  >  1:1258825/1‑127 (MQ=255)                                                   aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                      >  2:766321/1‑139 (MQ=255)                                                     aaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatca                                                                                    >  1:326779/1‑139 (MQ=255)                                                             aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                                            >  2:900498/1‑139 (MQ=255)                                                             aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                                            <  2:834193/139‑1 (MQ=255)                                                                 ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaaga                                                                                                         <  2:848301/106‑1 (MQ=255)                                                                 ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaaga                                                                                                         >  1:848301/1‑106 (MQ=255)                                                                      tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                                                   <  2:326779/139‑1 (MQ=255)                                                                      tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                                                   >  2:754023/1‑139 (MQ=255)                                                                      tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGAAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                                                   <  1:246503/139‑1 (MQ=255)                                                                       ttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattct                                                                  >  1:1239603‑M2/1‑66 (MQ=255)                                                                         cagccagcCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGAACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctt                                                                 <  1:1247107‑M2/139‑75 (MQ=255)                                                                           gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                 <  2:480682/120‑1 (MQ=255)                                                                           gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                 >  1:480682/1‑120 (MQ=255)                                                                              agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcc                                                                                                                                   >  2:215430‑M2/1‑59 (MQ=255)                                                                              agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcc                                                                                                                                   <  1:215430‑M2/67‑9 (MQ=255)                                                                               gccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctt                                                          <  2:441942‑M2/139‑82 (MQ=255)                                                                                ccTGTTGGCGGAGTGGCTGAAGGCCACGCAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctta                                                         <  2:977289‑M2/139‑83 (MQ=255)                                                                                 cTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGTAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAGCAGGGGGATTTAACa                                                        <  2:1006463/139‑1 (MQ=255)                                                                                          gAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg                                               >  2:1051528/1‑139 (MQ=255)                                                                                           aGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAcctg                                                                    <  1:595241/117‑3 (MQ=255)                                                                                           aGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAcctg                                                                    >  2:595241/1‑115 (MQ=255)                                                                                           aGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                              <  1:766321/139‑1 (MQ=255)                                                                                             tGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcg                                            >  2:560366‑M2/1‑44 (MQ=255)                                                                                             tGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCt                                            <  2:456445/139‑1 (MQ=255)                                                                                              ggCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcga                                           <  2:418240‑M2/139‑97 (MQ=255)                                                                                               gCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaa                                          >  1:418240‑M2/1‑42 (MQ=255)                                                                                                  gAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTa                                       <  1:754023/139‑1 (MQ=255)                                                                                                   aaGGCCACGGAACCGGGAACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtg                                       >  2:1247107‑M2/1‑39 (MQ=255)                                                                                                       ccACGGAACCGGGA‑CACCAACAGGTAATGCAGAGcct                                                                                                                                        >  2:570739‑M2/1‑34 (MQ=255)                                                                                                       ccACGGAACCGGGA‑CACCAACAGGTAATGCAGAGcct                                                                                                                                        <  1:570739‑M2/37‑4 (MQ=255)                                                                                                         aCGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                      >  2:819600/1‑85 (MQ=255)                                                                                                         aCGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                      <  1:819600/85‑1 (MQ=255)                                                                                                         aCGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg                                                      <  1:655421/117‑1 (MQ=255)                                                                                                         aCGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg                                                      >  2:655421/1‑117 (MQ=255)                                                                                                         aCGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTAt                                >  1:607005/1‑139 (MQ=255)                                                                                                         aCGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTAt                                >  1:15202/1‑139 (MQ=255)                                                                                                          cGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATc                               <  1:517486/139‑1 (MQ=255)                                                                                                               ccGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGc                                                                             >  1:1292847/1‑88 (MQ=255)                                                                                                               ccGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGc                                                                             <  2:1292847/88‑1 (MQ=255)                                                                                                               ccGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaacaa                          >  2:507273/1‑139 (MQ=255)                                                                                                               ccGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaacaa                          <  1:507273/139‑1 (MQ=255)                                                                                                                  ggA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                           >  2:678475/1‑71 (MQ=255)                                                                                                                  ggA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                           <  1:678475/71‑1 (MQ=255)                                                                                                                    a‑cacCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAGTGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                     <  2:607005/139‑1 (MQ=255)                                                                                                                    a‑cacCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                     <  1:1051528/139‑1 (MQ=255)                                                                                                                    a‑cacCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                     <  1:1128061/139‑1 (MQ=255)                                                                                                                          aaCAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                           <  1:328949/64‑1 (MQ=255)                                                                                                                          aaCAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                           >  2:328949/1‑64 (MQ=255)                                                                                                                           aCAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCa                   >  1:325740/1‑135 (MQ=255)                                                                                                                           aCAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCa                   <  2:325740/135‑1 (MQ=255)                                                                                                                             aGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAacac             <  2:441836/139‑1 (MQ=255)                                                                                                                                   tGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaaa                                                                                            >  1:368239/1‑54 (MQ=255)                                                                                                                                   tGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaaa                                                                                            <  2:368239/54‑1 (MQ=255)                                                                                                                                        agccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggct  <  2:1088208‑M2/139‑138 (MQ=255)                                                                                                                                        agccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctc        <  1:323633‑M2/133‑132 (MQ=255)                                                                                                                                        agccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctc        >  2:323633‑M2/1‑2 (MQ=255)                                                                                                                                        agCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAc  >  1:1238411/1‑139 (MQ=255)                                                                                                                                         gCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                     >  1:1258081/1‑119 (MQ=255)                                                                                                                                         gCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                     <  2:1258081/119‑1 (MQ=255)                                                                                                                                         |                                                                                                                                          CAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGA‑CACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAC  >  NC_000913/1209467‑1209739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.