| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 566,277 | 0 | C | T | 56.4% | 20.9 / 129.0 | 94 | pseudogene (100/279 nt) | exoD | pseudogene, DLP12 prophage, phage‑type exonuclease family,Phage or Prophage Related |
| Reads supporting (aligned to +/- strand): ref base C (21/20); new base T (28/25); total (49/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTATTGCCGGAAGCGTGGC > NC_000913/566140‑566399 | tGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCt > 1:887337/1‑139 (MQ=255) gTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTcgc > 2:948758/1‑139 (MQ=255) ttttttCGATGAACTACGGCACGATCTCGTCAAAACTCGCCATGTAATTTTCGTCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCAc > 1:274392/1‑139 (MQ=255) ttttCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCAccc < 1:849756/139‑1 (MQ=255) tCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACTACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCcaca < 2:887337/139‑1 (MQ=255) tCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCcaca > 2:945549/1‑139 (MQ=255) gATGAACTCCGGCACGATCTCGTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGTCATTTTTTCGCGTCACCCACTTg < 2:357222/139‑1 (MQ=255) aTGAACTCCGGCACGATCTCGTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGc < 1:406494/139‑1 (MQ=255) aTGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGc < 2:931622/139‑1 (MQ=255) gCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑c < 1:496996/139‑1 (MQ=255) aTCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑c < 2:361668/134‑1 (MQ=255) aTCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑c > 1:361668/1‑134 (MQ=255) aTCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTggg < 1:948758/139‑1 (MQ=255) tctcGTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTcg > 2:485393/1‑109 (MQ=255) tctcGTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGc > 2:742858/1‑139 (MQ=255) tctcGTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCGTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTcg < 1:485393/109‑1 (MQ=255) gTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCAccc < 1:253351/113‑1 (MQ=255) gTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCAccc > 2:253351/1‑113 (MQ=255) tCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCAccc > 2:1072806/1‑112 (MQ=255) tCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCAccc < 1:1072806/112‑1 (MQ=255) aaaaCTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTaa < 1:1043569/139‑1 (MQ=255) aaaCTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAg < 1:447358/139‑1 (MQ=255) aaCTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGc > 2:1102988/1‑139 (MQ=255) aCTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGcc < 2:25041/139‑1 (MQ=255) aCTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGct < 1:657295/139‑2 (MQ=255) aCTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATAAGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGct > 1:435473/1‑138 (MQ=255) gCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGctgact > 1:1032599/1‑134 (MQ=255) tGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTAt < 2:1066239/139‑1 (MQ=255) aCTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATAAGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTAtggc < 2:435473/139‑4 (MQ=255) cATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTc > 1:114702/1‑81 (MQ=255) cATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTc < 2:114702/81‑1 (MQ=255) atcccGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGaaa > 2:1108714/4‑139 (MQ=255) atcccGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGaaa > 2:950162/4‑139 (MQ=255) tCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTgg > 2:32510/1‑107 (MQ=255) tCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTgg < 1:32510/107‑1 (MQ=255) cccGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTg > 2:354303/2‑100 (MQ=255) cccGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTg < 1:354303/99‑1 (MQ=255) cccGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTggg > 2:980191/2‑108 (MQ=255) cccGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTggg < 1:980191/107‑1 (MQ=255) cccGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAacc > 2:38969/2‑139 (MQ=255) gCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAaccacc < 2:19326/139‑1 (MQ=255) tCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTAt > 1:797016/1‑122 (MQ=255) tCAATCACGACATAATGCAGGCCTTCACCCTTCATACGCGGGTCATTGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGctgactctat < 2:797016/122‑10 (MQ=255) cGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGaa > 2:678664/1‑139 (MQ=255) aCATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAAtt < 2:900455/139‑1 (MQ=255) cATAATGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAActt > 1:881887/1‑139 (MQ=255) tGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCcac > 1:144000/1‑69 (MQ=255) tGCAGGCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCcac < 2:144000/69‑1 (MQ=255) gCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTc < 2:405457/58‑1 (MQ=255) gCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTc > 1:405457/1‑58 (MQ=255) gCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAaccac > 1:363169/1‑116 (MQ=255) gCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAaccac < 2:363169/116‑1 (MQ=255) gCCTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATcc > 2:1094974/1‑139 (MQ=255) ccTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATTTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATccc < 1:835964/139‑1 (MQ=255) ccTTCACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATccc < 1:963424/139‑1 (MQ=255) tCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCggg < 1:945549/139‑1 (MQ=255) cACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGc < 1:51055/100‑1 (MQ=255) cACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGc > 2:51055/1‑100 (MQ=255) cACGCTTCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGGGa > 1:712908/1‑139 (MQ=255) ttCATACGCGGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGGGAGGTaa > 2:329498/1‑138 (MQ=255) acgcgGGTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGGGAGGTaaacggg < 2:1032599/138‑7 (MQ=255) cgGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCACCCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTAtt > 1:112457/1‑139 (MQ=255) ggTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGGGAGGTaaacgggcattt < 1:38969/139‑12 (MQ=255) ggTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGGGAGGTaaacgggcattt > 2:1210932/1‑128 (MQ=255) ggTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGGGAGGTaaacgggcattt > 2:423621/1‑128 (MQ=255) ggTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGGGAGGTaaacgggcattt < 2:799207/139‑12 (MQ=255) ggTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGGGAGGTaaacgg < 1:1024223/133‑6 (MQ=255) ggTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGGGAGGTaaacgg > 2:1024223/1‑128 (MQ=255) ggTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCgg > 2:1205831/1‑122 (MQ=255) ggTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCgg < 1:1205831/122‑1 (MQ=255) ggTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTATTGcc > 1:419293/1‑139 (MQ=255) ggTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTATTGcc > 1:62567/1‑139 (MQ=255) ggTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTATTGcc > 2:818210/1‑139 (MQ=255) tCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCGGGAGGTaaacgggcatttca > 1:180466/1‑126 (MQ=255) gCAAAGTACCAGGCGTCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTACCTCGAAACCACCGAGCCGGAATTTCGTGAAATCCCGGGAGGTACGAGTATTGCCGGAAGCGTGGc > 1:751061/1‑139 (MQ=255) gCAAAGTACCAGGCATTTTTTCGCGTCTCCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTAtg < 2:877931/72‑2 (MQ=255) gCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑c > 2:334720/1‑47 (MQ=255) gCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑c < 1:334720/47‑1 (MQ=255) gCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTaa < 1:952487/60‑1 (MQ=255) gCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTaa > 2:952487/1‑60 (MQ=255) gCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTa < 2:921310/70‑1 (MQ=255) gCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTa > 1:921310/1‑70 (MQ=255) gCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTAtg > 1:877931/1‑71 (MQ=255) gCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATg > 1:881257/1‑102 (MQ=255) gCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATg < 2:881257/102‑1 (MQ=255) gCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCggg > 2:106105/1‑112 (MQ=255) gCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCggg < 1:106105/112‑1 (MQ=255) gCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCggg < 2:850844/112‑1 (MQ=255) gCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCggg > 1:850844/1‑112 (MQ=255) gCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTATTGCCGGAAGCGTGGc > 1:1191139/1‑139 (MQ=255) gCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTATTGCCGGAAGCGTGGc > 1:886009/1‑139 (MQ=255) gCAAAGTACCAGGCATCTTTGCGCGTCACCCACATGCTGTACTGCA‑CCTGTGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAAGCCCGGGAGGTACGAGTATTGCCGGAAGCGTGGc < 2:608703/139‑1 (MQ=255) gTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATg < 2:1183496/97‑1 (MQ=255) gTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATg > 1:1183496/1‑97 (MQ=255) cTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTATTGCCg > 1:316408/1‑113 (MQ=255) cTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTATTGCCg < 2:316408/113‑1 (MQ=255) cTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTATTGCCGGAAGCGTGGc > 2:38175/1‑123 (MQ=255) cTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTATTGCCGGAAGCGTGGc < 1:38175/123‑1 (MQ=255) | TGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATGCGCGGGTCATAGTTGGCAAAGTACCAGGCATCTTTTCGCGTCACCCACATGCTGTACTGCA‑CCTGGGCCATGTAAGCCGATTTTATTGCCTCGAAACCACCGAGCCGGAATTTCATGAAATCCCGGGAGGTACGAGTATTGCCGGAAGCGTGGC > NC_000913/566140‑566399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |