| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 380,013 | 0 | G | . | 20.2% | 249.8 / 53.0 | 84 | intergenic (‑132/+56) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (44/23); new base . (10/7); total (54/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.94e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTG > NC_000913/379891‑380148 | catcatCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCg > 2:851142/1‑139 (MQ=255) tataCTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGccc > 2:924899/1‑139 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgg > 2:391816/1‑139 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGAAAGGCCGCCCCGGATAgcgggc > 2:410313/1‑139 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGgcc < 1:751588/122‑1 (MQ=255) gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGgcc > 2:751588/1‑122 (MQ=255) ggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGCTCGGAAAATAAAGAGGTAAG‑GGGGGGGGGGCTAATCGGCATTGAGGGCCGCCCCGGCTAgggggc > 1:151060/1‑139 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATGACACTCGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGCGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCa > 2:1101209/1‑139 (MQ=255) tatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGa > 1:4939/1‑139 (MQ=255) gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGaa > 2:546294/1‑137 (MQ=255) gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGGGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGaa < 1:546294/137‑1 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAgg > 2:727466/1‑105 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAgg > 2:967907/1‑105 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAgg < 1:727466/105‑1 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAgg < 1:967907/105‑1 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGgccgcc < 1:808304/110‑1 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGgccgcc > 2:808304/1‑110 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑TAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCa > 2:873298/1‑139 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGAAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCa > 1:154137/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcg > 2:918712/1‑99 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcg < 1:918712/99‑1 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTg > 2:917307/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTg > 2:1629415/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTg > 2:1347549/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTg > 1:568193/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTg > 1:448365/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTg > 1:1451732/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGc > 2:59419/1‑139 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑‑GGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCa > 1:1442217/1‑139 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg < 2:1344302/98‑1 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 1:1344302/1‑98 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAgg > 2:245231/1‑79 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCGGAAGGAATCAGAATTT‑CCGGGTCAGACGGGCTGCAAGt > 2:452069/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGt > 2:1566785/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGt > 2:120201/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGt > 1:883407/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGt > 2:46450/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGt > 2:52104/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGt > 1:370197/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGt > 1:499663/1‑139 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CGAGGTCAGACGGGCTGc > 2:969085/1‑134 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAACTT‑CCAGGTCAGACGGGCTGc < 1:969085/134‑1 (MQ=255) aacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAgg < 1:245231/78‑1 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGc > 2:180944/1‑139 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGAAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGc > 2:1144205/1‑139 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAgg < 1:87728/75‑1 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAgg > 2:87728/1‑75 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCAGGCGGCAGAAGGAATCAGAATTT‑CCGGGTCAGACGGGCTGCAAGTTGCa > 1:430592/1‑139 (MQ=255) ggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCa < 1:120201/139‑1 (MQ=255) ggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCa < 2:370197/139‑1 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGc < 2:990306/130‑1 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGc > 1:990306/1‑130 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAg > 2:231416/1‑139 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAg > 2:941064/1‑139 (MQ=255) aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACTAAGAGG‑ACT‑GGGGGGGGGGCGAATCGGCAGGGTAGGCCGCCCCGGGTTGCGGGCGGTAGAAGTAATCCTGATTT‑CCATGTCAGGCGGGATGCaatgtggaggcc > 1:471802/1‑129 (MQ=255) aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAAGGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGAc > 2:190263/1‑139 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAgg > 1:656749/1‑69 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAgg < 2:656749/69‑1 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGt > 2:689765/1‑139 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCgg > 2:259595/1‑59 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCgg < 1:259595/59‑1 (MQ=255) aaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGACCGCCCCGGATAgcgggc > 2:721358/1‑84 (MQ=255) aaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGACCGCCCCGGATAgcgggc < 1:721358/84‑1 (MQ=255) tATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatc < 1:1347549/139‑1 (MQ=255) tGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGtt < 1:917307/139‑1 (MQ=255) aTGTGGTCGGAAAACAAAGGGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTggg < 1:231416/139‑1 (MQ=255) aTGTGGTCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTgggg < 2:1194856/139‑1 (MQ=255) tgGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg < 1:941064/139‑1 (MQ=255) gTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTc > 1:270529/1‑139 (MQ=255) tCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCa > 1:253556/1‑110 (MQ=255) tCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCa < 2:253556/110‑1 (MQ=255) tCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCa < 1:868623/110‑1 (MQ=255) tCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCa > 2:868623/1‑110 (MQ=255) tCGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCg > 2:1320483/1‑139 (MQ=255) cGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTa < 1:59419/139‑1 (MQ=255) cGGAAAACAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCAGGCGGCAGAAGGAATCAGAATTT‑CCGGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTa < 2:430592/139‑1 (MQ=255) ggAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTa < 2:448365/139‑1 (MQ=255) gAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAgg < 2:1280420/43‑1 (MQ=255) gAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAgg > 1:1280420/1‑43 (MQ=255) gAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc > 2:332719/1‑139 (MQ=255) gAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc < 1:180944/139‑1 (MQ=255) gAAAAAAAAGAGG‑AAA‑GGAGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCAGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTGAAATCATCTCTTGGGGTTTCGTAc < 1:924899/139‑1 (MQ=255) aaaaCAAAGAGG‑AAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACca > 1:280082/1‑139 (MQ=255) aaa‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTg > 1:478754/1‑139 (MQ=255) a‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa > 1:460324/1‑38 (MQ=255) a‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa < 2:460324/38‑1 (MQ=255) | CATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGG‑AAA‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTG > NC_000913/379891‑380148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |